Clostridium perfringens 13: CPE1885
Help
Entry
CPE1885 CDS
T00074
Name
(GenBank) phenylalanine-tRNA ligase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CPE1885
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpe01007
]
CPE1885
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpe03016
]
CPE1885
Enzymes [BR:
cpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CPE1885
Amino acid related enzymes [BR:
cpe01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CPE1885
Transfer RNA biogenesis [BR:
cpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CPE1885
Prokaryotic type
CPE1885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
YqxI
Motif
Other DBs
NCBI-ProteinID:
BAB81591
UniProt:
Q8XJ76
LinkDB
All DBs
Position
complement(2165212..2167593)
Genome browser
AA seq
793 aa
AA seq
DB search
MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE
KLKICQVNIGSEMIQIVTAADNMKEHDKVPVALHGAILADGSKIKKGKLRGEVSNGMFCS
EEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLSVLGMARET
AATTRKTYRMPNTKFEVKCDKNINDEIKVTVNDKLCNRYMARGVKNVKVAPSPTWMQERL
LDAGVRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGDKFVTLDEIEREL
NSDVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRVNSKNLGLRTESS
SRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTLEVSVSWINKFLG
TSLEAEEMKKCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVARIYGYNNIPATL
ISTSTEKEAKDKKQLLDEKVIDTMLASGLNQSISYSFVSPKVFDKICVPEDSSLRNVVKI
KNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKTYIPNSDENELPTERNILT
IGIYGQCDYFDLKGIVENLLDSLGLKSASFKRMSENPSYHPGKTAELILGRTSLGVLGEI
HPDVNENYGVDVPCYVAELDLDAMYNFSKTEKYYKPLPKYPAITRDIALLVDDAVLVQEI
EDAIRKAGGQVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILR
ALEYKLGAQLREQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaccatttaattggcttaaagattacgttgatatagatatgacagcagaagag
ttaggcgatgctttaactttatcaggatcaaaagtagaagaggtcgtaactgctggtgca
gaaatagaaaatatagttacttgtcaaatagataaaatagaacaacatcctgatgctgaa
aagcttaaaatttgtcaagtaaacataggatcagaaatgattcaaatagtaacagctgca
gataatatgaaagaacatgataaagttccagtagctttacatggtgcaatattagcagat
ggaagcaaaatcaaaaaaggtaaattaagaggagaagtttcaaacggaatgttctgttca
gaagaagaattaggaattgctgacggaaaagaagttattggacttatgattttaccagag
gatgctccaattggtgtttgtataaaagaatatttaggtcttaataaacaagttttagat
tttgaaataacttcaaatagacctgattgtttaagtgttttaggtatggctagagagaca
gcagccacaacaagaaaaacttacagaatgccaaatactaagtttgaagttaaatgtgat
aaaaacataaatgatgaaataaaagttacagttaatgataagctttgtaatagatatatg
gctagaggagttaaaaatgtaaaggtagctccatcaccaacttggatgcaagaaagatta
ttagatgctggggttagacctataaataacatagttgatattactaactttgttatgtta
gagcttggtcaaccaatgcatgcctttgatagaagagaattaaaatcttctaacatagta
gttgagagagctaaagatggagataaattcgtaactttagatgaaatagaaagagaatta
aattcagatgttctttgcataaaagatggagaagagatagttgctttagctggtataatg
ggtggattaaactccggtgttaaagatgacacaacagagattgtatttgaatcagctaac
tttgatggaactaatataagagttaattctaaaaatttaggcttaagaactgaaagttca
tcaagatttgaaaaagacatagatccaaacttagcagctttagctttagacagagcatgt
gctttagttgaagaactaggctgtggagaaattatggaaggcactatagatgtctataat
aatgttaaagaagaaaaaactctagaagtaagtgttagctggataaacaaattcttagga
acttcattagaagcagaagagatgaagaaatgtttagatagcttagatttaaaaactact
ataaatggagatacattagaaatattagtacctacatttagaatagatgttgatataaga
gaagatgtagcagaagaagttgcaagaatctatggatacaataatattccagctacttta
atatcaactagtacagaaaaagaagctaaggacaagaaacaattattagatgaaaaagtt
atagatacaatgttagcatcaggcttaaatcaatctataagttactcatttgtaagtcca
aaggtatttgataaaatctgtgtaccagaagatagtagccttagaaatgttgttaaaata
aagaatccactaggagaagattacagtgttatgagaacttcaacacttccttcaatgatg
gaatctttagctagaaactattcaagaagcaatgagatagttagattatttgaaataggc
aaaacttatattccaaattcagatgaaaatgaattaccaactgaaagaaatatattaaca
attggtatttatggacaatgtgattactttgatttaaaaggaatagttgaaaacttatta
gattcattaggtcttaagagtgcatcattcaagagaatgagtgaaaacccaagttatcac
ccaggaaaaactgctgagttaatattaggtagaacttcactaggtgttttaggagaaatt
cacccagatgttaatgaaaattacggagtagatgttccttgctatgttgctgaattagac
ttagatgctatgtataacttctcaaaaacagagaaatattacaaaccattacctaagtat
ccagcaataacaagagatatagctttacttgttgatgatgcagttttagttcaagaaata
gaagatgcaataagaaaagctggtggtcaagtagttgaaaaagttgaattatttgacgtt
tataaaggtgctcaaataccagaaggtaagaagagtattgcatatgctatcgcttacaga
gatccaagcaaaactttaaaagataaagatataaataaagttcatgataagatactaaga
gctttagaatataagctaggagctcaattaagagagcaataa
DBGET
integrated database retrieval system
