Clostridium perfringens 13: CPE1994
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Entry
CPE1994 CDS
T00074
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe03030
DNA replication
cpe03410
Base excision repair
cpe03420
Nucleotide excision repair
cpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPE1994
03410 Base excision repair
CPE1994
03420 Nucleotide excision repair
CPE1994
03440 Homologous recombination
CPE1994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpe03032
]
CPE1994
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE1994
Enzymes [BR:
cpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPE1994
DNA replication proteins [BR:
cpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPE1994
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CPE1994
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPE1994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
XPG_I
HHH_5
HHH_2
Stealth_CR3
Motif
Other DBs
NCBI-ProteinID:
BAB81700
UniProt:
Q8XIW9
LinkDB
All DBs
Position
complement(2283149..2285749)
Genome browser
AA seq
866 aa
AA seq
DB search
MKRLLILDGNSLLNRAFYAVPLLSNSEGTHTNAIYGFTNMLFKMREDIKPDYIVCTFDKK
APTFRHLEYGDYKAGRKKMPPELAEQFPIVKEMLKLFSITTYELDGFEADDIIGSLAKVA
EGEGIEVYIMTGDKDALQLAAKDINVCITKKGVSEIEVYNYDRMVEEYGVTPTQFIDVKG
LMGDKSDNIPGVPGVGEKTAFKLIKEYGSVEAVLENIDNISGKKLKENLTEYSEQAIFSK
KLATIMTNVPIDFDLDEIKSKDDYNKDQLKALFTKLQMKSILDKLSNGEEEEPEIEVKIT
NIENNKELEDLFKNINEEVYINFTYLNKEKYSTIEIDKIFINYDEKNYLINFKELVKEEE
NIKSFKEFFENEAILKNGYSIKNALTALKKLGIDFNGLAFDCELAAYLIDSSKGEYTLLS
LINNYLSKFPNVKEGEEDLVGITFMKELTLVLKKKIEEEKMERLMYDIELPLETVLSSME
SIGFKVNKDILDELSIKFKRELEETQKEIFELADEEFNINSPKQLGKILFEKLDLPVIKK
TKTGYSTNAEVLEKLKDKHPIIEKITYFRQLSKIYSTYVEGLKAVIDTDGSIHSTFNQTV
TTTGRLSSTEPNLQNIPIKYEMGREIRKVFIPKKEGDLLISADYSQIELRVLAHISGDEN
MIDAFNHHSDIHTKTASEVFKVPVEEVTPLMRSRAKAVNFGIVYGIGDFSLSQDLNISRK
EAKEYMDIYFERYPKIKEYISKVIHEAQTKGYVLTMLNRRRYIPEANASNKIVKALGERL
AMNAPIQGTAADIIKLAMVNVYNKLKELNLNSKLILQVHDELIINVVKGELDIVKKLLKE
EMENTIKLSVPLDVDVNVGEDWYRLK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattattgatattagatgggaacagtcttttaaatagagccttttatgctgtg
cctttgcttagcaatagtgaaggaactcatacaaatgctatttatggttttacaaatatg
ctttttaagatgagagaggatataaaacctgattatatagtttgtacttttgataaaaaa
gcaccaacttttagacatttagagtatggggattataaggctggaagaaagaaaatgcct
cctgagttagcagagcagtttcctattgttaaggaaatgttaaagttattttcaataaca
acttacgaattagatggattcgaagcagatgatattataggaagtttagctaaggtggct
gaaggtgaaggaatcgaagtgtatattatgactggagataaggatgcccttcaactagca
gctaaggatataaacgtatgtataactaagaagggtgtttctgaaatagaagtttataac
tatgatagaatggttgaagaatatggagttactcctactcagtttatagatgttaaagga
cttatgggagataaatctgataatattccaggggtaccaggagtaggagaaaaaacagcc
tttaaattaataaaagagtatggttcagtagaggcagttttagaaaatatagataacata
agtggtaaaaagttaaaagaaaatttaactgagtacagcgaacaggctatattctctaaa
aagttagctactattatgactaatgttcctatagattttgatttagatgagattaaatca
aaggatgattataataaagatcagttaaaagctttatttacaaagcttcaaatgaaatct
atattagataaattatcaaatggggaagaagaagagccagaaatagaagttaaaataact
aatatagaaaataataaagaattagaagatttatttaagaatataaacgaagaagtatat
attaattttacttacttaaataaagaaaagtattctactatagagattgataaaatattt
attaattatgatgagaaaaattatttaattaactttaaagagttagtaaaagaagaggag
aatattaaatcctttaaagaattttttgagaatgaagctatattaaaaaatggctatagt
ataaaaaatgccttaacagcattaaaaaaattaggaatagattttaatggattagccttt
gattgtgaattagcagcatatttaatagattcatctaagggagaatatactcttttatcc
ttaataaataactatctttcaaaattccctaatgtaaaagagggagaggaagacttagtt
ggaattacatttatgaaagagttgactttagttctaaagaaaaaaatagaagaagagaaa
atggaaagacttatgtatgatattgagcttcctttagaaacagttttatcttctatggaa
tcaataggatttaaagtaaataaagatattttagatgagttatctattaagtttaaaaga
gagctagaagaaacacaaaaagagatctttgaacttgcagatgaagagttcaacataaat
tctccaaaacaattaggtaagatattatttgaaaaattagatttaccagttataaagaaa
actaaaactggctattcaactaacgcagaagttttagaaaagcttaaggacaaacatcct
ataatagaaaaaataacatattttagacagctttcaaaaatatattcaacttatgttgaa
ggattaaaggctgttatagatacagatggttctatacattcaacatttaatcaaactgta
actactacaggtagactttcatcaacagagcctaaccttcaaaatatacctataaaatac
gaaatgggtagagaaataagaaaggtatttataccaaaaaaagaaggagatttattaata
tcagctgactactcacaaatagaacttagagttttagctcatatttctggtgatgaaaat
atgatagatgcatttaatcatcattcagatatacacactaagactgcttctgaagtgttt
aaagtgccagttgaagaggtaactccattaatgagaagtagggctaaggcagtaaacttt
ggtatagtatatggaataggagattttagtctttctcaggatttaaatatttcaagaaaa
gaagctaaagaatatatggatatatattttgaaagatatccaaaaattaaagagtatatt
tctaaggttattcatgaagctcaaacaaaaggatatgtattaactatgttaaatagaaga
agatatatacctgaagcaaatgcttcaaataaaatagtaaaagctttaggagaaagactt
gcaatgaatgctccaatacaaggaacagcagcagatataataaagcttgctatggtaaat
gtatataacaagttaaaagaattaaatttaaatagtaagttaatattacaggttcacgat
gaacttataataaatgttgtaaaaggagaattagatattgttaagaaacttctaaaagag
gaaatggaaaatacaattaaattaagtgtaccattagatgttgatgttaatgttggagaa
gattggtataggttaaaataa
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