Clostridium perfringens 13: CPE2175
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Entry
CPE2175 CDS
T00074
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPE2175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE2175
Enzymes [BR:
cpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CPE2175
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPE2175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
Helicase_RecD
PIF1
AAA_5
AAA_22
PhoH
UvrD_C
HHH
SLFN-g3_helicase
UvrD-helicase
NTPase_1
HHH_2
nSTAND3
AAA
5_3_exonuc
AAA_28
DEAD
HHH_3
T2SSE
DnaB_C
NPHP3_N
AAA_29
HerA_C
bpMoxR
ABC_tran
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
BAB81881
UniProt:
Q8XIE6
LinkDB
All DBs
Position
complement(2494907..2497141)
Genome browser
AA seq
744 aa
AA seq
DB search
MEALNGIVESIVFKSSDTGYTVIKFRENNIIHTAVGVLPHVKEGQNLKITGSWVNHSQFG
KQFKVEECEEILPTSKDGIEKYLSSGIIQGIGPVTAKKIVNKFGEDTLNILDNNIERLKE
IEGIGKKKLETIIESYREQRELKNITIFLQTHGLSVNQCLKIYKKYGASSVDTVKNNPYI
LCDEISGIGFKTSDKIARSLGIEIDSPFRIQSGIRYVINEFCANGHTFMPKDELIKEASN
VLTVSGDIIEENIKNAALDRKIKLERVNDKEGVFTIPNYYCELGITNRILTLAISNFQDI
SVDVDHLILQFEKKNNITFAESQKDAIISAFQNGIEIITGGPGTGKTTIIKCIIEIFETC
GLKVLLGAPTGRAAKRMSESTGKEATTIHRMLDMGVFEKEESVFVTNAEEHSLEADVVII
DEASMIDITLMNALLKSIKVGTRLIIVGDVDQLPSVGAGNVLNDFIESGFTKVVRLKEIF
RQGKESMIVVNAHKINKGEMPKLNEKGTDFFFIRNDIQEGILNTIIDLINTRLPKFNSNW
DKLKSIQVLVPMKKGVLGVTNLNERIQNVLNPKAPYKKEKEFRSMVFREGDKVMQIKNNY
SLKWTRIAGKGEHEGLGVFNGDMGFIESIDLEGKKLSIIFDDERRVIYDFMYLDELDLAY
AITIHKSQGSEFPVVIIPAYMGAPLLMNRNLLYTGITRAKEMVVVVGIPKALKYMVDNTR
SMERYSSLNWRIKEVISNEVFEQD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggaagcattaaatggaatagttgagagtatagtatttaaaagctcagatacaggatat
acagttataaaatttagagaaaataatattattcatacagcagtgggagttttaccacat
gtaaaagaaggtcaaaatttaaaaattacaggaagttgggttaaccattcccagtttgga
aaacaatttaaagtagaagaatgtgaagagatattacctacttcaaaggatggaatagaa
aaatatttatcttctgggataatacaggggataggacctgttacggcaaaaaaaattgta
aataaatttggagaagatactcttaatattttagataataatattgagagattaaaagaa
atagaaggaataggtaaaaagaagttagagaccataattgagtcttatagagaacaaaga
gaattaaaaaatataactatatttttgcaaacccatggattaagtgtaaatcaatgtttg
aagatttataaaaaatatggggctagttcagttgatacagttaaaaataatccatatata
ctttgtgatgaaatttcaggaataggatttaagacttctgataagattgctagaagttta
ggaatagaaattgattcaccttttagaattcaaagtggtataagatatgtaataaatgaa
ttttgtgctaatggtcatacatttatgccaaaggatgaacttataaaggaagcaagtaat
gtattaactgtaagtggagatataatagaagaaaatattaaaaatgcagctttagataga
aagataaagttagagagggttaatgataaagaaggtgttttcacaatacctaattattat
tgtgagcttggaataactaataggattttaactttagctataagcaatttccaggatata
agtgtagatgtagatcacctaatacttcaatttgaaaagaaaaataatataacttttgca
gaatcacagaaagacgctataataagtgcttttcaaaatggtatagagataataactggg
ggaccaggaacaggaaagaccactataataaagtgtataattgaaatttttgaaacttgt
ggtttgaaggttcttttgggagcacctactggaagagcggctaaaagaatgagtgagtct
acaggaaaagaagctaccacaatacatagaatgcttgatatgggagtctttgaaaaagaa
gaaagtgtttttgtaaccaatgcagaggaacattccttagaggctgatgtggttataata
gatgaggcatcaatgattgatataactttaatgaatgctttacttaaatctattaaggta
ggtactaggcttataatagtgggagatgttgatcagcttccatcagtaggagctggaaat
gtattaaatgattttatagagagtggatttacaaaggttgtacgtctaaaggaaatattt
agacaaggaaaagagagtatgattgtagtaaatgcacataaaataaataaaggtgagatg
cctaagttaaatgaaaaaggtactgatttcttcttcataagaaatgatattcaagaggga
atattaaatactattatagatttaataaatactaggttgcctaagtttaactcaaattgg
gataaattaaaaagtatacaggttttagttcctatgaaaaagggtgtattaggagttaca
aatttaaatgaaagaattcaaaatgtcttaaacccaaaggctccatataaaaaagaaaaa
gaatttagaagtatggtatttagagagggagataaggttatgcagataaagaataactac
tctctaaaatggaccagaatagctggaaaaggtgagcatgaaggcttgggtgtatttaat
ggagatatgggatttatagaaagtatagatttagaaggaaaaaaactatctataatcttt
gatgatgaaagaagagttatttatgattttatgtatttagatgaattagatttagcttat
gcaattacaatacataaaagtcaaggaagtgaattccctgtagtaataatacctgcatat
atgggtgcaccattacttatgaatagaaatttattatatacgggaataactagggcaaaa
gaaatggttgtagtagttggaatacctaaagcattaaaatatatggttgataatacaagg
agtatggagcgttattcctctttaaattggagaataaaagaagtaatatctaatgaggtt
tttgaacaagattaa
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