Clostridium perfringens 13: CPE2273
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Entry
CPE2273 CDS
T00074
Name
(GenBank) oligopeptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cpe
Clostridium perfringens 13
Pathway
cpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPE2273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpe02000
]
CPE2273
Transporters [BR:
cpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CPE2273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BAB81979
LinkDB
All DBs
Position
complement(2611027..2612766)
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AA seq
579 aa
AA seq
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MKKRKLVALLTAGLAASMLFVACGGANNTAQGNGNGSESGGTTKDLSKPERIEASNPSAL
PDAAKNRTDTLIVGTTDPKGEFVPIYSSTLYDSWVNKLVFDGLITNNEKGEPIPNVAESY
EVSEDGKTYTFKLNKGIKFTNGQELTAKDVAFTFTSICDPGYDGPRMDAVNNLVGYEEYN
KGDASSVEGIKVIDDYTISFTNKNTDAAGIWNFEYGIMPESVYKFEKGNFQAVKDKLLEP
VGSGAYKFVHFKPGQEVKFEKNADYWKGEPKIPYIVMKVTNAQTLLQELMAGTVDIDRVG
AKPENIDPLKQAGFLNLDLYMQNGYGYMGLNYGSDKVKDPKVRQALLYGLNREGFMQSYY
QGYGQVYNSHILPTSWAYNPDVPKYEYNPEKAKELLDEAGWKDTNGNGVRDKDGVELELQ
WLTYTGSKYVDALIPIVQQSWEQIGVKVTPELMEFGTMMDKVNNREYDIFNGAWNLSIDP
DPSGIFAISQDVPGGFNNIGWRNEEADKLLKEGKGTTNQEERKKAYAEWQLKFSEDVPYI
LLGNAQEMFASNSRVKGYNPSTYIDWTHDVYKLELDNNK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaaaattagttgcattattaacggcggggttagcagcttcaatgttattt
gtagcatgtggaggagctaacaatacagctcaaggaaatggtaatggttcagaatcagga
ggaactactaaggatttatcaaagccagagagaatagaggcatcaaatcctagtgcactt
ccagatgctgcaaaaaatagaactgatactttaatagtaggaactacagatccaaagggt
gaatttgttccaatatattcttctactctttatgattcatgggttaacaagttagtattt
gatggattgattactaataatgaaaagggagaaccaattccaaatgtagcagaaagttat
gaagtttctgaagatggaaaaacttatacatttaaattaaataagggtattaaatttact
aatggtcaagaattaacagcaaaggatgtagcatttacatttacttctatttgtgatcca
ggatatgatggaccaagaatggatgctgtaaataatttagttggatatgaagagtacaat
aagggcgatgctagtagtgttgaaggtataaaggttattgatgattatacaatatcattc
actaacaagaatactgatgcagctggtatatggaattttgaatatggaattatgcctgaa
agtgtttataaatttgaaaaaggaaacttccaagctgttaaggataaattattagagcca
gtaggttcaggtgcttataaatttgttcactttaaaccaggacaagaagttaagtttgaa
aaaaatgctgattactggaaaggggagccgaagattccttatatagtaatgaaagttaca
aatgcacaaacattattacaagaattaatggctggaacagttgatatagatagagttggt
gctaaaccagaaaatatagatccattaaaacaagctggattcttaaacttagatctatat
atgcaaaatggttatggatacatgggacttaactatggaagtgataaggttaaagaccct
aaagtaagacaagcgttactttatggattaaatagagaaggattcatgcaatcttattac
caaggatatggtcaagtttacaactcacacattcttcctacttcatgggcatataaccca
gatgttcctaagtatgaatataatccagaaaaagctaaagaattacttgatgaagctggt
tggaaagatacaaatggaaatggagttagagataaggatggagttgaattagaacttcaa
tggttaacttatactggttctaaatatgttgatgctttaatcccaatagttcaacaatct
tgggaacaaataggtgttaaagttactccagaacttatggaatttggaacaatgatggat
aaagttaataacagagaatatgatatattcaatggtgcttggaacctttcaatagatcca
gatccatcaggaatatttgcaatctctcaagatgtaccaggcggatttaataatattgga
tggagaaatgaagaagcagataagttattaaaagaaggtaaaggaacaacaaatcaagag
gaaagaaagaaagcttatgctgaatggcaattaaaattctctgaagatgtaccttatatt
cttcttggaaatgctcaagaaatgtttgcatcaaattcaagagttaaaggatacaaccct
tcaacttatatagattggactcacgatgtttataaacttgaattagataacaataaataa
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