Clostridium perfringens 13: CPE2376
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Entry
CPE2376 CDS
T00074
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPE2376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpe03021
]
CPE2376
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE2376
Enzymes [BR:
cpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPE2376
Transcription machinery [BR:
cpe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPE2376
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPE2376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAB82082
UniProt:
P0C2E6
LinkDB
All DBs
Position
complement(2737177..2738124)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPVIQCVESNDNGTYGKFEIEPLERGYGITLGNALRRILLSSLPGVAPTSVKIDS
VLHEFSTITGVKEDVTEIILNLKMLALTMEGEGPKTIYIDAQGPGVVTGADIKTDGDVEV
VNKDLHIATLDNDGKLYMEIVVNRGRGYVTQNKNKTEDLPLSAIAIDSIYTPVKRVNFSV
QNTRVGQITDYDKLTLEIWTNGTIRIEEAISLSAKILIEHFKLFMTLTDNANDVEIMIEK
EEDKKEKALEMTIEELDLSVRSYNCLKRAGINTVQELAGKSMDDMMKVRNLGKKSLEEVE
RKLNELGLNLRLNDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaagccagtaattcaatgtgttgaatcaaacgataacggaacatat
ggtaagtttgagatagaaccattagaaagaggttatggaataactcttggtaatgcatta
agaagaatattactttcttctttacctggagtggctccaacttcagttaaaatagattca
gttcttcatgagttttcaacaataacaggtgttaaagaagatgttacagagataatctta
aatcttaaaatgttagcacttactatggaaggtgaaggaccaaaaactatttatattgat
gctcaaggaccaggtgttgttactggagcagatataaaaacagatggtgatgtagaagtt
gtaaacaaagatctacatatcgctacattagacaacgatggtaagttatatatggaaatc
gtagttaatagaggaagaggatatgttactcaaaacaaaaataaaacagaagatcttcca
ttatcagctattgctatagattctatatacactcctgtaaagagagttaatttctctgtt
caaaatacaagagttggtcaaattactgactatgataaacttacattagaaatttggact
aatggaactataagaatagaagaagcgatttcattatcagctaaaattcttatagagcac
ttcaaattattcatgactttaactgacaacgctaatgatgttgagataatgattgaaaaa
gaagaagataaaaaagaaaaagctttagagatgactatagaagagcttgacttatcagta
agatcatacaattgcttaaagagagcaggtataaacactgttcaagagcttgcgggcaag
agcatggatgatatgatgaaagttagaaacttaggtaagaaatctctagaagaagtagaa
agaaagttaaacgagttaggcttaaatttaagactaaatgacgagtag
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