Chaetura pelagica (chimney swift): 104384774
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Entry
104384774 CDS
T08631
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104384774 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
104384774 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104384774 (LSM5)
03041 Spliceosome [BR:
cpea03041
]
104384774 (LSM5)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104384774 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
104384774 (LSM5)
Spliceosome [BR:
cpea03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104384774 (LSM5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104384774
NCBI-ProteinID:
XP_010004193
LinkDB
All DBs
Position
Unknown
AA seq
55 aa
AA seq
DB search
MGLVFPDNELSDMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
168 nt
NT seq
+upstream
nt +downstream
nt
atgggccttgttttccctgacaacgaactttcagatatggtgttagaagacgttacagaa
tttgagattacacctgagggcagaagaatcacaaagctggaccagattttgctaaatgga
aataacataaccatgctggttcctggaggagaaggacctgaagtataa
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