Chaetura pelagica (chimney swift): 104384875
Help
Entry
104384875 CDS
T08631
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104384875 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104384875 (LSM1)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104384875 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
104384875 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104384875
NCBI-ProteinID:
XP_009991561
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MSFPPVNPLPVGRGSSFLTPTDPLGNRGEQTDGTLGPRDELKDPLSAPGTGRDPPAPPGP
PPGPTLPGSGSRSRLEANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKE
SDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKERGLSVPRADTLDEY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcccccagtgaaccccctgcccgtcgggcggggaagcagctttttaacgcca
acagaccctttggggaaccgaggagaacaaaccgacgggactttagggccgagggatgag
ctcaaagacccgctcagcgcgccggggacgggccgggacccacccgctccgccgggcccc
cctcccggtccgaccctgcccggcagcggatcccgatcccggctggaagcaaacttggtg
ttgcaccagactgtggagcgcatccacgtgggcaagaagtatggggacatcccacgaggg
atctttgttgtgagaggagagaacgttgttctgctgggggaaatagacctggaaaaggag
agtgatacacctctgcagcaagtctccattgaggagatcctggaggagcagcgggtggaa
cagcaggccaagcaggagtcagagaagctgaaggtgcaggcgctgaaggagcggggcctc
tccgtcccacgggcagacaccctggacgagtactag
DBGET
integrated database retrieval system
