Chaetura pelagica (chimney swift): 104384919
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Entry
104384919 CDS
T08631
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104384919 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104384919 (SCARF1)
Membrane trafficking [BR:
cpea04131
]
Endocytosis
Phagocytosis
Scavenger receptors
104384919 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_2
EGF_TEN
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
104384919
NCBI-ProteinID:
XP_009991612
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSEGEQDAHGKKPKAGRRKRPRCGRDGTDGCRCGAEELPGLVLVSRRDEEHPAHPLPPAV
AVACCPGWKQEGRECTAALCEGEEACRADEVCVRPGVCLCKPGFFGADCSSRFKDHGTLA
AAILVPLLLLLLCIACCCCGAGPADARDRAAVPDDGVLARMKHHVQGVLANLSAMMPCFS
LGGYKLPKVTALSTVGCRDLPPRPRPAGTFGDGCQFLCPECVSGTCDPVSGECVCQEGYW
GASCNDTCPEGYFGVNCSSPCQCSRGTCHPARGDCVLSFKDHGTLAAAILVPLLLLLLCI
ACCCCGAGPADARDRAAVPDDGVLARMKHHVQGVLANLSAMMPCFSLGGYKLPKVTVSHH
DTELPFTPSFIEPPSAAWVSDSSFSSFDTDNEGPEYSVPPREGDIHLHEGVSPPGEALPD
PSAFNSEDVSLPFDIPRTSSIAKAKRPSVSFAEGTKFGAVETPSPSRKPKTPWGPSKLSQ
PLGDAAAELPPERPKSIRAEEGVRDVVGATERGKSPELVLSLESKGQAASEEEPKYENVT
SGSADSLPSPAKEPPAPPAAT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagggggagcaggatgcccatgggaagaaacccaaggctggccggaggaagagg
ccgcgctgtgggagggacgggacagacggatgtcggtgcggggctgaggagctgccggga
cttgtcctggtgtcccgccgggatgaggagcacccggcccatcctctgcctccagctgtg
gctgtggcgtgctgtcccggctggaagcaggaagggagggagtgcacggctgcgctgtgc
gagggggaggaggcctgccgagcagacgaggtgtgtgtgagacctggggtttgtctctgc
aaacctggcttcttcggagcagactgcagttcccgttttaaagaccatgggacccttgca
gctgccatccttgtccctctcctgctgctgctgctctgcattgcctgctgttgctgtgga
gctggcccagcagacgcaagagacagagcggccgtgcctgatgatggtgtcctggccagg
atgaagcaccacgtgcagggggtgctggcaaacctcagtgccatgatgccttgcttttcc
ctgggtggctacaaacttcccaaagtcacagccctgagcactgtggggtgccgggacctc
ccaccccgcccccgccccgccggtaccttcggggacggatgccagttcctctgccccgag
tgcgtgtcggggacctgtgacccggtgtcgggagagtgtgtgtgccaggaggggtactgg
ggagccagctgcaacgacacctgccccgaggggtattttggagtgaactgctcttcaccc
tgccagtgttcccgggggacctgccaccctgctcgaggggactgcgtgttgagttttaaa
gaccatgggacccttgcagctgccatccttgtccctctcctgctgctgctgctctgcatt
gcctgctgttgctgtggagctggcccagcagacgcaagagacagagcggccgtgcctgat
gatggtgtcctggccaggatgaagcaccacgtgcagggggtgctggcaaacctcagtgcc
atgatgccttgcttttccctgggtggctacaaacttcccaaagtcacagtttcccaccac
gacacagaactccccttcacccccagcttcatcgagccgccgtcggccgcctgggtctca
gacagctccttctcctccttcgacactgacaacgagggacccgagtactctgtccctccc
agagaaggtgacatccatctgcacgagggggtgtccccccctggggaggcactcccagac
ccttctgccttcaactccgaggacgtctcgctgcccttcgacatcccccgcacctccagc
atcgccaaggccaagcgtccctccgtgtccttcgctgaggggaccaaattcggggcagtg
gagacccccagccccagtcggaagcccaaaaccccatggggcccatccaagctgtcccag
cccctgggggacgcagcggccgagctcccccctgaacggccaaaaagcatcagggctgaa
gaaggggtcagagatgttgtaggtgccacggagaggggcaaaagccctgagctggtcctc
agcctggagtcgaagggacaggctgcctcggaggaggagccaaaatacgagaacgtgacc
agtggcagtgctgattcactccccagccctgccaaggagccaccagccccccctgcagcc
acctga
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