Chaetura pelagica (chimney swift): 104385064
Help
Entry
104385064 CDS
T08631
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104385064 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104385064 (USP4)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104385064 (USP4)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104385064 (USP4)
Ubiquitin system [BR:
cpea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104385064 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
104385064
NCBI-ProteinID:
XP_009991770
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MADEMWNSEVYLVDSRWFKQWKKYVGFDSWDMFGAGDPGLYPGPIDNSGLFSDPETQTLK
EHLIDELDYVLVPTEAWNKLVTWYGCIEEQQPIVRKVVEYGLFVKHYKVEVYLLELKLCE
SSDPDNVISCHFSKADTIAAIEAEMRKLFNIPMQKDTRLWNRYMSNTYEQLIKLDNTVQD
AGLYQGQVVLIEVRNEDGTWPGQNFLAKSSTATSRNFTTSSKSSTSSYSSVSATSVITNG
DSSNSYGLNSSQMGRGGSGFICNSYNGRDISPLAQPGLCGLSNLGNTCFMNSALQCLSNT
PPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYAELIKQMWSGRQSHVAPRVFKTQVGRFA
PQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRN
DSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLRRDRLMEVTLVYADPQCRPV
QYRVVVPMMGSISNLCESLSKLSGVPAENMVVTDVYNHRFHKIFQMDEGFNHIMPKDDIF
VYEVRRPSEDGAECVTLSIHFREKTMRQSSNTTGTVLFGQPLLISVPKHKLTVDHLYSVV
LKQISRYVKLPLVEEYSTPCPDKGTCNGSNGVVEGDIEEMEHQDGGQEGKEKVVEADPCH
SEGCMQIESARDLQPCKKQYFTFSLMNSSGTSELNSIVEGKVLKLNAFSALAIDWDSETR
RLLFDEQEAQAFEKHASMSQPQKKKAVVALRDCIELFTTMETLGEHDPWYCPNCKKHQQA
TKKFDLWSLPRILVVHLKRFSYSRYWRDKLDTVVEFPVRGLNMSEFVCDPRAGSYVYDLI
AVSNHYGAMGVGHYTAYAKNKVNNKWYYFDDSSVSLASVDQIVTKAAYVLFYQRRNSEEL
PAPSPPQEEYDGMDTN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagatgtggaattcagaagtgtacctggtggacagccgctggttcaagcag
tggaagaagtatgtgggcttcgacagttgggacatgttcggcgcgggcgatcccggcctt
tacccggggcccatcgacaactcgggtctgttcagcgatccagaaactcagactttaaaa
gaacacctcattgatgagctagattatgtgctggttcccactgaagcctggaataaacta
gtaacgtggtatggctgcatagaagaacagcagcctattgtgagaaaagtggtggaatat
ggtctgtttgtgaagcactataaggttgaagtttatcttcttgagctgaagctgtgtgag
agcagtgatcctgacaatgtgattagctgccacttcagcaaagcagatactattgctgcc
atcgaggcagaaatgagaaaactattcaatatcccaatgcagaaggatactaggttatgg
aacaggtacatgagtaacacttacgagcagctcatcaagctggataacacagtgcaagat
gcagggctctatcaaggtcaggttgttctaatagaagtgagaaatgaagatggcacatgg
cctggacagaatttcctggcaaaatcaagcactgcaactagcagaaactttactacctct
tcaaaatcatcaacaagttcttattcctcagtgtctgccacttctgtcattactaacggt
gatagcagtaactcctatggactgaacagctcccagatgggcaggggaggttctggattt
atctgcaactcttacaatggcagggacatttctcccctggcgcagcctggactctgtggg
cttagtaaccttggcaatacctgcttcatgaattctgcattacagtgtctcagcaatacc
cctcctctgaccgactatttcctggaagataagtatgaagctgaaataaatcagaacaat
ccactgggaatgagaggagaaattgcagaagcctatgcagagctcattaaacagatgtgg
tctgggagacagtctcatgtggccccacgtgtgtttaaaacacaggttggccgatttgct
cctcagttttcaggatatcagcagcaagattcccaggagctcttggctttccttctagat
ggcttgcatgaggatttgaacagagtgaagaagaagccctacttggagctgaaggatgcc
aatggcagacctgactcggaggtggcaaaagaggcctgggagaatcataggctgaggaat
gactctatcattgtggatattttccatggtcttttcaaatctacccttgtttgtcccaaa
tgctccaaagtttctgtgacctttgatccattctgttacttaacccttccactgcccttg
aggagagatcgtctcatggaagtgaccctggtatatgcagacccacagtgtaggcctgtc
cagtaccgggtcgtggtgccgatgatggggtccatctcaaatctctgtgaatcactctcc
aaactctctggtgttcctgcagaaaatatggtggtgacagacgtgtataatcatcgattc
cacaaaatcttccaaatggatgaagggtttaatcatatcatgccaaaagacgacatcttt
gtatacgaagttcgcaggccaagtgaggatggtgctgagtgtgttactctctcaattcac
tttcgggaaaagacaatgaggcaatccagcaatactacagggactgtactctttggtcag
ccactattaatatctgtgccaaaacacaagctcactgtggatcacttgtacagtgtggtt
ttgaagcagatcagccgctatgtgaagctccctttggtggaagaatactctacaccctgc
ccagacaaaggcacctgcaatggctccaatggtgtggttgaaggtgacattgaagagatg
gagcatcaggatggtgggcaggaaggcaaggaaaaggtggtggaagctgatccctgccac
tctgagggctgtatgcagatcgagtcagcaagagacctgcagccttgcaagaagcagtat
ttcacttttagcctcatgaattcctctgggacctctgagttaaactccattgtagaagga
aaagtcctaaaactgaatgctttttctgcacttgctattgactgggactctgaaacacgg
aggctactttttgatgaacaggaggcacaggcatttgaaaaacatgcaagtatgtcacaa
ccacagaagaagaaggctgtggtcgctctcagagactgcatagagctcttcactactatg
gaaacgcttggtgaacatgacccatggtactgccctaactgtaagaaacatcaacaggcc
acaaagaagtttgacttgtggtctttgcccaggattttggtagtgcatttaaagcgcttc
tcatacagcagatactggagagataaacttgacactgttgtggaattccctgtcaggggt
ttaaacatgtccgagtttgtctgcgacccaagagcaggctcatatgtgtatgacctcatt
gcagtttccaatcactacggagccatgggagtgggccactacactgcctacgcaaagaac
aaagtgaataacaagtggtactactttgatgacagcagcgtatccctggcttcagtagac
caaatagtgacaaaagctgcatatgtgctgttttatcagcgccgaaacagcgaggaactt
cctgccccatctcctccccaggaagagtatgacggcatggacaccaactag
DBGET
integrated database retrieval system
