Chaetura pelagica (chimney swift): 104385224
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Entry
104385224 CDS
T08631
Symbol
KARS
Name
(RefSeq) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104385224 (KARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpea01007
]
104385224 (KARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpea03016
]
104385224 (KARS)
Enzymes [BR:
cpea01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
104385224 (KARS)
Amino acid related enzymes [BR:
cpea01007
]
Aminoacyl-tRNA synthetase
Class II (A)
104385224 (KARS)
Transfer RNA biogenesis [BR:
cpea03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104385224 (KARS)
Prokaryotic type
Other AARSs
104385224 (KARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
Sulfotransfer_1
tRNA_anti-codon
Sulfotransfer_3
tRNA-synt_2d
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
104385224
NCBI-ProteinID:
XP_009991954
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MSVNRRGPTIASGSRERRGEDAASPGRQGIRPRQEPGAAEPWALVPARSSDWVRKAVPPG
LVVLQEDSLSREAAALYGHGCLNSAPSRAAQKLYNLRKTLRTWASVLLCPEGLSSSSLAT
MMKSRSVQVLLTLAVLAFLLIHSHFLLCSKNVPMVEKPSQVHILILSSWRSGSSFTGQIF
SQHPSVFYLMEPAWHVWVKMYQNSAEVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDL
FQWETSRALCSPPACHSFNRRDIIPASSCRTICGKYPFSKVEEACKTYSHVAVKEVRFFD
LKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTVANLKRDSDIVVGSQNTKGEMGPYNT
MQVICKSQVEIYKAGSQAVPSFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELQK
WVHNITHGKGQGSQAFDIGSRDALRVSQAWRTTLPFQKIEKVQNVCKDAMDLLGYRLVQS
EEEQKNMSLDLLFTQISSDELKRRLKAERKTAEKEAKQKEQSEKHSSKPSLASDSENSTG
LDEESLDPNQYYKIRSHAIQQLKGTNEDPYPHKFHVDISLSDFIEKYSHLQPGDHLTDVT
VQVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSKLYKSEEEYFRINNKLRRGDIIGVK
GNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFI
TRAKIITYIRSFLDELGFLEIETPMMNVIPGGAVARPFITYHNELDMNLYMRIAPELYHK
MLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHI
TGSYKITYHPDGQDGQAYEIDFTPPFRRISMVCDLEKVLGVKFPSAECFETEETRKFFDA
LCAERNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSHQGLTER
FELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTA
GWGMGIDRITMFLTDSTNIKEVLLFPAMKPEDNKKEAQPGPPAEGTSV
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaacaggcggggaccgaccatcgcctcggggtcccgtgagcggcgcggggag
gacgcggccagcccggggcgccaggggatccggccccgccaggagcccggggcagcggag
ccctgggcactcgtccctgcgaggagcagcgactgggtgagaaaagccgtcccgccaggt
ctggtggtgcttcaagaggactccttaagtagagaagcagctgctctgtatgggcatggc
tgcctgaattcagcaccatcacgggctgcacaaaagttatacaatctgcgcaaaactcta
aggacctgggcttcagtgctgctctgtccagaaggactttccagctcgtcccttgcaacc
atgatgaagtctagaagtgtgcaggtgcttctgactctggcagttctggccttccttctg
atccactcccacttcctactctgcagcaaaaatgtccctatggtagaaaaaccttctcaa
gtccacatcctcattctctcctcctggcgatcaggatcttccttcactggacaaatcttc
agccagcaccccagtgtcttctacctgatggaacctgcatggcacgtgtgggttaagatg
taccagaacagtgctgaagtcttacacatggcagtgcgggacctcgtcaggtcagtcttt
ctgtgtgacatgtctgtgtttgatgcttacatgtctagccagaagaagaagtctgatctg
tttcagtgggagacaagccgagccttgtgctccccccctgcctgtcactccttcaaccgc
agggacataatccctgccagcagctgcagaaccatctgtggcaagtaccccttcagcaag
gtggaggaagcctgtaagacctacagccatgttgccgtcaaggaggttcggttctttgac
ctcaaagttctctacccccttctcactgatccatccctgaacctcaaaatcattcacttg
gttcgtgatcctcgggctgtgttccggtcccgagagaatacagtggcaaacctgaaacgt
gacagtgacattgttgtgggctcccagaacactaagggagaaatgggaccctacaacaca
atgcaagtaatctgcaaaagccaagttgagatttacaaggcaggcagtcaagctgttccc
agcttcctgaaagaccgctacctgctggttcgctatgaagacattgtcagagaccctctg
gcaagggctgctcagatgtacaggtttgcagaactccacttcacaccagaacttcagaag
tgggtgcacaacatcacccatgggaaagggcaaggatcacaggcttttgatattgggtcc
agagatgcactgagagtatcccaggcctggagaaccactcttcccttccagaaaatagaa
aaagtgcaaaatgtgtgcaaggatgcaatggacttgctgggctaccggcttgttcaatca
gaagaagagcaaaaaaatatgtcactagatctcctgtttacccagatctcctctgatgag
ctgaagaggcgtttgaaggctgagagaaaaacggctgaaaaagaggcaaagcagaaagag
caaagtgaaaagcattcaagtaagccctccttggcttctgactccgagaacagcactggt
ttggatgaagaaagcttggatccaaatcaatactacaagatccgtagccatgcgatccag
cagctgaagggcaccaatgaagatccttatccccacaagttccatgtagacatatctctc
tcagatttcatagagaagtacagccacctgcagccaggagatcacctgacagatgttaca
gtgcaagtggcaggccgaatccacgcgaagcgtgcctctggggggaagctgatcttctac
gatcttcgtggagaaggagtcaagttgcaggtcatggcaaactccaagctctacaaatct
gaggaagagtatttccgtattaacaacaagctgcgtcgtggggacattattggtgtaaag
gggaatcctgggaaaacaaagaaaggggaactgagcattattccttatgaaataactctt
ttgtctccatgcctgcacatgttgcctcatcttcactttggcctcaaagataaggaaact
aggtatcgtcagagatacttggatttaattcttaatgattacgtgaggcagaaatttata
acccgtgcaaagatcattacctacatccgaagctttctggatgagttgggcttccttgag
attgaaactcctatgatgaatgtaattccaggtggagctgtggcaagaccttttatcacg
taccacaatgaactggatatgaacttatatatgagaattgctccagagctttaccataag
atgttggtggttggaggcttggacagagtgtatgaaatcggacgtcagttccggaatgaa
ggaattgatttgactcacaaccctgagttcacaacttgtgagttctatatggcttatgca
gactaccatgacttgatggaaattacagagaagttgctttcagggatggtgaaacatatt
actggaagttacaagatcacttaccatccagatggtcaagatggacaggcctatgagata
gactttacccctcccttccggcggattagcatggtgtgtgatctggaaaaggtcctggga
gtgaagtttccatcagctgagtgttttgaaaccgaagaaactcgcaagttctttgatgcc
ctttgtgcagagagaaacgttgagtgtccacctcccaggacaacagccaggcttcttgac
agattagttggtgaattccttgaagtgacttgcatcaaccctacattcatctgtgatcac
ccacagatcatgagtcctctggccaagtggcatcgctctcaccaggggctgacagagcgc
tttgagctctttgtgatgaagaaggaggtgtgcaatgcctacacagagctcaacgatcct
ttccggcagcggcagctttttgaggaccaggccaaggccaaagctgcaggtgatgatgaa
gccatgtttattgatgaaaacttctgcactgcgctggagtatggccttcctcctacggct
ggctggggcatgggcatcgaccgcatcaccatgttcctcacagattccaccaacatcaag
gaggtgctgctgttccccgccatgaagccggaggacaacaagaaggaggcgcagcccggg
cccccggccgaaggcacctccgtgtga
DBGET
integrated database retrieval system
