Chaetura pelagica (chimney swift): 104385341
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Entry
104385341 CDS
T08631
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104385341 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104385341 (TTC37)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
104385341 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_1
TPR_16
TPR_11
TPR_17
TPR_8
TPR_12
TPR_CcmH_CycH
CFAP70_TPR_C
TPR_9
ANAPC3
CFAP70_mid_TPR
TTC22_N
CABIN1_N
ARM_TT21_C
TPR_15
DUF928
DUF8323
HAT_Syf1_M
BTAD
TolB_N
TPR_Psidin_N
MSC6_N
Motif
Other DBs
NCBI-GeneID:
104385341
NCBI-ProteinID:
XP_009992084
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MSSKEVKAALKSAREAIRNKEYKEALKHCKVVLKQEKNNYNAWVFIGLAAAELEQPDQAR
AAYRKAAEIEPNQLLAWQGLANFYEKSKQTDDKGDLADVYQKLLELYASADKQKWYDVCN
KLVELYHQEKKYLEVAETWQKLIQMKEGEGAEKAELHQLWKKMIQLLKDSTQNRDNKTVQ
SLLTAFEHAVNSADTVPSGDHQNLYKDFIQCLSKFSHETVRLEKACNDMMTLYPTDTYPL
EVLCLHFVQSGTLSEEALHCFSKLLEMDASSGPGIIGFGIKCLQEKKYKEAIKSLTEGLQ
KPSQCPAAWHYLAEAQMKIHKQKDAVLSCNQALEALGTPEGPSLQLKNVILQLKAEALIK
MADVYSAEEAIKALEQIVEASSDPAVLALRGQAYLNKGLTDEASKISQELLLSHPDVAES
HALEGFIHYSQKNYEQAERSFLNAIERKADTAEYHKYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDETDEESGEAAVDLSMELG
DTDTALSILNEVTEKAVTGTAKWAWLHRGLYYLRTDQPSKAVADLQAALRADPKDSNCWE
SLGEAYLGRGSYSTALKSFRRATELNPGLVYSIYRAAAVEQILGKYDNAIATYQQILKKT
ADYVPALKGLGECYLMLAKSALGNFHDRRAMGYIEQALEFFTRAAKHRPDVSCLWKLLGD
TCTSVHVISPAKVNVQVVGSLLGKNPDKQMLKKSELLGLGGRCYSRALKLMPLPSIWCDL
GINYYRQAEHLTAVGTDTSEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKVAQSLDPSYLLCWLGQA
FIAEAVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDRSNRNTELYLYNIVQMNAI
PAAHVVLSKYTERNPGDASAFTMLGYLNEYLHLKRQAADAYERAAVLLKNSEDTEKYNIA
MQNYGRSLCALGQCDKAIEVYTSIPLTSFDGIVGLALAYFKKGLLKESTKAYEKALSVAE
SEQDKAHILTALAIIEYKQNRVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHQKRDDNIYDRCLIASAVYALQGRSAAVQREVSKAIHSNPDNASLWSLLSRVV
PLYAPQKAKGGAVAGNAACELDVNLGKVCLPQSANFIIXXXXXXEDQKNKPVKNIQKAVH
LCPDNPAAWAVLMAACHAENTLVCLKNTQPKRTGLEMTLVSTVSAKTGENNLPRNYIQTL
EDWCLCQAVTSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPDT
ILEELHKTVMTSSTSVAAWQWLANVYRSQRMMVGAEMCYRKSLQLASQQGSWSGKLSSLL
RLAMLALEICMANVSNEHWPSLVREATTEALKLSSCPVAALLQALLQYHHKMGARETRRM
LERVVYQPGNPETVVSVARWYLLQHLHAKDDHELIDVLIQNAKANGDARTLELNEELSAS
A
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaggaggtgaaggcagcattaaagagtgctagagaagcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggtggtcttgaagcaagaaaaaaataactac
aatgcttgggtgttcataggcctggcagctgcagagttagagcagcctgaccaggctaga
gcagcttacaggaaggctgctgagattgaacccaaccagttgctggcatggcagggatta
gcaaatttttatgagaaatccaagcaaacagatgacaaaggagacttagctgatgtttac
cagaagctgttggaactttatgcaagtgctgacaagcagaagtggtatgatgtatgtaac
aagcttgtggaactgtatcatcaagaaaagaaatacttagaggtggctgaaacatggcag
aaactaattcagatgaaagagggggaaggtgcagaaaaggcagagcttcatcagctgtgg
aagaagatgatccagttactgaaagacagtacacagaaccgggataataagactgtgcag
tcgcttttgactgcatttgagcacgcagtgaactctgctgacactgttcccagtggagac
caccaaaatctttacaaggattttattcagtgcttgtcaaaattttctcatgaaacagtg
aggttggagaaggcctgtaatgacatgatgactttgtatcctactgacacttacccttta
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaagaggccctgcactgt
ttttctaagcttttggagatggatgcaagtagtggtccaggcatcattggttttggtatc
aaatgccttcaagaaaagaaatacaaggaggcaattaagagtcttacggaaggtttgcag
aagcccagccagtgtccagcagcatggcattatttggcagaggcacagatgaagattcac
aaacaaaaggatgctgtcctgtcttgcaatcaagctcttgaggctcttggaacacctgaa
ggtcccagtcttcagctgaagaacgttatccttcagttgaaagcagaggctttgattaaa
atggcagatgtttattctgcagaagaagccattaaagcacttgagcagattgtggaggca
agcagtgatccagcggttttagctctcaggggccaggcttatttaaacaaaggtttaacg
gatgaagcttcaaagatttcacaagagctgctgctgtcccaccctgatgtggctgagtcc
catgctctagaaggtttcatccattattcccaaaagaactatgaacaggcagaaagaagt
tttctaaatgctattgaaagaaaggctgacactgcagagtatcataaatacctggggctc
acgtactggttcatgagtgatgagacaaaaaaggacaaaggaaaagcgctcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagacattgcaggagacaaaagtagagctcgtggttgctataaaaaggcttttgag
ctggatgaaactgatgaagaatctggagaagcagctgtagacttaagcatggaacttgga
gacacggacactgctctgtcaatcctgaatgaggtaactgaaaaagcagttactggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactgatcaaccatcaaaa
gcagtggctgatttacaggcagctctccgagctgatccaaaggattccaactgctgggag
tctctaggggaagcttacttgggcagaggtagctattcaacagctctgaaatccttcagg
agagcaactgagctgaacccagggctcgtgtacagtatttacagagctgcagcagttgag
cagattctaggcaaatatgacaatgctatagctacctatcaacagatcttaaagaagaca
gcagactatgtgcctgcactaaaaggacttggtgagtgctatctcatgctggcaaaatca
gcccttggtaacttccatgacagaagagctatgggttacatagagcaagctcttgaattt
ttcacaagggcagcaaagcaccgtcctgatgtgtcttgcctctggaaactgcttggggat
acctgcaccagcgtgcatgttatttcaccagccaaagtgaatgttcaagttgtgggatcc
cttctgggtaaaaatccagacaaacagatgctgaagaaaagcgagttgctcggactggga
ggaaggtgttacagcagagctttgaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgggcactgacacgagtgag
atcagtgaactgctggagaaatctttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcacttggtgtggttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggaccaatttgggggttttgtatctggcaacaggaaacattgagcaagctcatgaa
gccttcaaagtagcccagtctctggatccttcttacttactgtgttggcttgggcaggct
ttcattgcagaggcagtaggcagctatgataccatggatctcttcaggcacacaactgaa
ctcagcatgcatactgagggagcaaaaggctatgcccactgggtgtgttcaacactgcag
gatagaagcaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctatt
ccagcagctcatgtggtcttgagcaaatacacagaaagaaatccaggcgatgcgtctgct
ttcacaatgcttggttatttgaatgagtatctgcatctgaaaaggcaggcagcagatgcc
tatgagagggctgctgtgttactgaaaaactctgaggatactgagaaatacaacatagca
atgcaaaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tacacatcaatacctctgacttccttcgatggcatcgtggggttagcattagcctacttc
aagaaaggactcttaaaagaaagtaccaaagcctatgaaaaagccttgtctgttgcggag
tctgaacaagataaagcacatatcctgactgccttggcaataatagagtataagcagaac
agagtggatgctgcaaagactctcctgtttaaatgctcattaaaggagccaagcacagaa
agtctgaaggctttgtgcacactaggactggtaaagcaggatgctacacttgcaacagca
gccctaaaggaattactgaagcatcagaagagggatgataacatttatgataggtgcctt
atcgcgtctgctgtttatgctttgcaaggtagaagtgcagcagtccagagagaagtctcc
aaagcaatacacagtaaccctgataatgcttctctctggtctctgctgtctcgagtagtt
ccactctatgcaccacaaaaggcaaaagggggagctgtggcaggaaatgctgcttgtgaa
cttgatgtaaaccttggaaaggtttgtcttccccaaagtgcaaactttataattnnnnnn
nnnnnnnnnnnagaagatcagaaaaacaagcctgtgaaaaatattcagaaggcagtccac
ctctgtccagacaatcctgctgcctgggctgtgctgatggcagcctgtcatgctgaaaac
actcttgtctgcctaaagaacactcagccaaaacgaacgggtctggagatgacacttgta
tctacagtttcagccaaaactggagaaaacaaccttccacgaaattatatccagactctt
gaagactggtgtctatgccaagctgttaccagtctcgaggagactggtaaactctcagaa
gctgaagctctttgtaccaagggtttaaaaagctgccctgagcacccagctctgtttctg
cttttgagacaagttcagtgtaagcagctgttgcagtcccacaaagaacttccagacacc
atcctggaggagcttcacaaaacggtcatgaccagttcaacttcagttgcagcctggcaa
tggctggcaaacgtgtatcggtctcagcgaatgatggttggggcagagatgtgttacagg
aagagtctgcagctggcgtcgcagcagggcagctggagtgggaagttatccagcctgctc
aggctagctatgctcgccctggaaatctgcatggctaatgtctcaaatgaacactggcca
tccttggttcgggaggcaacaactgaagctttgaagctttcttcttgccccgtggcagct
cttctgcaagcactgctgcagtatcatcacaaaatgggagcaagggagacccgtcggatg
ctggagagagtggtttatcagccagggaacccagaaaccgtcgtgtcagtggcacgctgg
tacctgctgcaacacctgcatgccaaagatgatcatgaattaatagatgtgcttatacaa
aatgccaaagctaatggggatgctagaactctggaattaaatgaggaattgtcagcaagt
gcctag
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integrated database retrieval system
