Chaetura pelagica (chimney swift): 104385571
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Entry
104385571 CDS
T08631
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104385571 (DDX27)
03009 Ribosome biogenesis [BR:
cpea03009
]
104385571 (DDX27)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104385571 (DDX27)
Spliceosome [BR:
cpea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104385571 (DDX27)
Ribosome biogenesis [BR:
cpea03009
]
Eukaryotic type
Pre-60S particles
Helicases
104385571 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104385571
NCBI-ProteinID:
XP_009992339
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
GEGAWAAALRQLRGKGRPATTLDEKIEKVRQKRKFQEKEAKQAKVRDEDAETEDKHAKKE
CDDFSRDEDVESQYSMDDETIFTKADKVTVKERRRSKKGEMEAESFFEDASQYDDNLSFQ
DMNLSRPLLKAITALGFKQPTPIQKACIPVALLGKDICACAATGTGKTAAFILPVLERLI
YKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSGPD
VLIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSNHRQTMLF
SATMTEEVKDLASVSLKNPTRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLTRT
FLDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLTQTQRLEALRRFKDEQIDILVATD
VAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKT
AKTPVKARILPQDVILRFREKIENLEKDVYAVLCLEREEREMQQSEAQINRAKKQLETGK
QETAGESLERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFMQDRQKKVQMTPEERS
QFEILKSQMYAERLAKRNRRAKRARALPEEEPTAVPAGPKQKKKLSVFDEELTNTSRRAL
KQYRAGPSFEDRKRLGMAQHRKGGSFKSKSRYKRK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
ggggagggcgcctgggcggccgcgctgcgccagctccgcgggaaggggaggccggcgacg
acgctggatgagaagattgagaaagtgaggcagaaaagaaagttccaggaaaaagaagct
aaacaagcaaaagtgagagatgaagatgcagagactgaggataaacatgctaaaaaggag
tgtgatgatttcagtagggatgaagatgtggagtctcagtattcaatggatgatgaaact
atcttcacaaaagcagataaagtgacagtgaaggaacggagaagatcaaaaaaaggagaa
atggaagcagagagcttttttgaagatgcctctcaatatgatgataacttgtcattccag
gacatgaatctttcacgacctttactgaaggcaatcacagctcttggtttcaagcagcca
accccaattcagaaggcttgtatcccagtggctcttctggggaaggacatttgtgcctgt
gctgccactgggacaggtaaaacagctgccttcatcttgcctgtcctcgagcgcctgatt
tacaaacctcgtcaggctccagtaacgcgggtgttggttctagtgccaacacgagagctg
ggcattcaggttcactctgtcaccaaacagctggcacagttcagcagcgtcaccacttgc
cttgctgtaggtggcctagatgtgaagactcaggaagcagctctgcgctctgggccagac
gttcttatcgccactcctgggcgactgattgaccatctccacaactgcccttctttccac
ctgagcagcgttgaggtgctgattctggatgaagcagacaggatgctggatgaatatttt
gaggaacagatgaaagaaataatcaggttgtgctccaaccaccgccagacaatgcttttc
tctgccacaatgacagaggaggtgaaagatttggcttctgtttctctgaaaaatcccacc
cgaatttttgtgaacagcaacacagatgttgcccctttcctgcggcaggaattcatccgg
atcaggcccaaccgtgagggggaccgtgaggctattgtatcagctctactgacacgaacc
ttcctggatcatgtgatgcttttcacccagacgaagaagcaagctcaccggatgcacatc
ctgcttgggctgatgggtctgcgggtcggggagcttcatgggaacctcactcagacacag
cggctggaagcactcaggcgctttaaggatgagcagatcgatattctggtagctacagat
gtggccgctcgtggacttgatattgaaggtgtgaaaacagtaatcaattttaccatgcct
aacaccaccaaacactatgttcatcgagtgggtcggacagcaagagcaggcagggctggt
cgctcggtttcacttgtgggtgaggaagagcgcaagatgctgaaggaaatagtgaagact
gccaaaacaccagtgaaagccagaatcctcccccaagatgtcatcctaagatttcgagag
aagattgagaatctagagaaagatgtgtatgcagttctgtgtttggagcgtgaggaacgt
gagatgcagcagtcagaagcccagatcaatagggcaaagaagcagctggagacaggaaaa
caagagacggcaggtgagagtttggagcggagctggttccagacccgtgaggagaggaag
aaagagaaattggctaaagctctgcaggagtttgacctagcattacgaggcaaaaagaaa
aggaagaaatttatgcaggacagacagaaaaaagtccaaatgacaccagaggaaaggtca
cagtttgaaatcttgaaatctcaaatgtatgctgagcggctggcaaagaggaatcgccga
gcaaagcgagccagggccttgccagaagaggaaccaacagcagtgccagcaggccccaag
cagaagaaaaaattgtcagtgtttgatgaagagctgaccaacaccagcaggagggccctg
aagcagtaccgagccggcccatcctttgaagaccgaaaacgcttgggtatggctcaacac
aggaaaggaggaagcttcaaatccaagtccaggtacaagagaaagtaa
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