Chaetura pelagica (chimney swift): 104385705
Help
Entry
104385705 CDS
T08631
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104385705 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpea04054
]
104385705 (DHX58)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104385705 (DHX58)
Pattern recognition receptors [BR:
cpea04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104385705 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
Helicase_C
ResIII
DEAD
AAA_11
SWI2_SNF2
DUF6618
Motif
Other DBs
NCBI-GeneID:
104385705
NCBI-ProteinID:
XP_009992497
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
AAFAGRQHLESRRGRRVAVLVNKAHLVEQHAQKEFQALQKDFRVIAISGDSDRRFFFASL
VKQSDVVICTAQILQNALSSREEETSLELTDFSLLVIDECHHTHKEAVYNKIMLNYLQHK
LRGQQDLPQILGLTASPGTGGATSFEGAVEHILQICANLDTEKIVSVQKELQQLQSHVPQ
PRKQHDLCQERAEDPFGEQLKNMMEQIQQYMGMPSLPQDFGTQIYEQHIVDLEKRGAETF
CRRTRVCALHLRKYNDALLIHDAVRMVDAFQCLQQFYETERDTKDPTEQFLTAIFEENRK
ILQALARDQRYENPRLCKLEEILRENFQPLGTSRGIVFTKTRQSAHSLLSWLQDTATLHG
QHIRAAVLTGSGYSNQTRHMTPSEQQDVIRQFHEGTLNLLFSTSVAEEGLDIPECNIVIR
YGLMTNEIAMMQARGRARTQDSVYSVVAKANSREVSRELLNENLVELMEEATRAVQAMPE
EEYHLKIMELQRVAVASWLMKEARISEQRRLHDPDTVLFYCVNCNVAVCRGSDIRMVESM
HHININPSFGLYYKVTSGKMQFPRAFKDWEPGCRIGCSLPTQDWGMEMIYRQVKVPMLCI
KNFVVETPAGKKKYKKWSSVTFLVEEFDYVQYCSSTQGLSL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gcggccttcgccggccggcagcacctggagagccggcggggccggcgagtggccgtgctg
gtcaacaaggcacacctggtggagcagcacgcccagaaggagttccaggcgctgcagaag
gacttcagggtgatcgccatcagcggggacagcgaccgcaggttcttcttcgcttccctg
gtgaagcagagcgacgttgtcatctgcacagcccagatcctgcagaacgcgctgagcagc
agggaggaggaaacgtccctggagctgacggatttctctctgctggtgatagacgagtgc
caccacactcacaaggaagccgtctacaacaagatcatgctgaactacctccagcacaag
ctccgtgggcagcaggacctgccacagatcctgggcctgacagcatcccctggcactggc
ggggcaacctcttttgagggggctgttgagcacatcctgcagatctgtgccaacctggac
accgagaagattgtgtcagtgcagaaggagctgcagcagctgcagagccatgttccccag
cccaggaagcagcacgacctgtgccaggagagagcagaggacccttttggtgagcagctg
aagaacatgatggagcagatccagcagtacatggggatgcccagcctgccgcaggacttt
ggcacgcagatttatgagcagcacatcgtagacctggagaaaagaggggcagagacgttt
tgccgccgcacgcgggtgtgcgcgctgcacctgcgcaagtacaacgacgcgctgctgatc
cacgacgccgtgcggatggtcgacgccttccagtgcctccagcagttctatgagactgag
cgggacacaaaagacccaaccgaacagttcctcactgccatatttgaggagaacaggaag
atcctgcaggcgcttgccagggaccagcgctatgagaaccccaggctgtgcaagctggag
gaaatcctgcgggagaacttccagcctctgggcacttctcgtggcattgtcttcaccaag
acccggcagagtgcccacagcctgctcagctggctgcaggacacagccacactccacggg
cagcacatcagggctgctgtcctcaccggctccggctacagcaaccagaccaggcacatg
acaccgagcgagcagcaggatgtgatcaggcagttccatgagggaaccctcaacctgctc
ttctccaccagcgtggctgaggagggcctggatatcccggagtgcaacatcgtgatccgc
tacgggctgatgaccaacgagatcgccatgatgcaggcccgtggccgtgcccgtacccag
gacagtgtctactcagttgttgccaaagccaacagcagagaggtctcccgtgagctgctc
aacgagaacctggtggagctcatggaggaggcgaccagagcagtgcaggctatgcctgag
gaagagtatcacctcaagatcatggagctgcagcgtgtggctgtggcctcctggctgatg
aaggaggccaggatcagcgagcagcggcggctgcatgacccggacactgttctcttctac
tgcgtcaactgcaacgtggctgtgtgccggggcagtgacatccgcatggtggagagcatg
caccacatcaacatcaaccccagcttcgggctgtattacaaagtcacctctgggaagatg
cagttcccgcgggcgttcaaggactgggagcccggctgccgcatcgggtgctccctgccc
acacaggactgggggatggagatgatctaccggcaggtgaaggtgcccatgctctgcatc
aaaaactttgtggtggagacaccagctgggaagaagaagtacaagaagtggagctccgtg
acgttccttgttgaggagtttgactacgtgcagtactgctccagcacccagggcctgtcc
ctctag
DBGET
integrated database retrieval system
