Chaetura pelagica (chimney swift): 104385780
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Entry
104385780 CDS
T08631
Symbol
TRIM66
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 66
KO
K12032
tripartite motif-containing protein 66
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104385780 (TRIM66)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104385780 (TRIM66)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
104385780
NCBI-ProteinID:
XP_009992578
LinkDB
All DBs
Position
Unknown
AA seq
1349 aa
AA seq
DB search
MSHIVALRVFSVKLHPTEMESLDLLRSCLVCKWDLQRREPRMLPCLHSFCKDCLPYLIQG
YSCIPTEYEVLYEGILSCPVCKQTCFARDVVENFLLKDFPTANSAMAKSCSTCKEKRPAH
SLCTGCNKWLCSSCTEEHRHDQETGDHFLSVSLKGCTAAADEAGELSLFCPVHTQEPLKL
FCESCDTLTCRSCLLTEHKEHRFRHLEEALQNQRVILENVITKVEEKKNGVQVSARQIED
RLLEVKHSYKRVENQIKMAKMFLINEINKRTNILLEQLEKITSEKKRKLEQQLQSVVVLS
RQVEHVQNFISWAVCSKNSIPFLFSKELIVFQIQRLLETNCNTDTGPPLKIRFTWDPSYW
TKQLSNLGGFTMEGGHVSHSDVLVCGNVQGLQTSLYHGHRSPASQLEPLSSQPPQFPPAV
QCPTPVCCSHCLSVPHPNRAQPSYQDMNRHKSFRQPPELHQQHFPLQQQQDKEQRAALQP
MKITQPGLEQQSRSEPGNVSGWVGKHLPSQQLQQTAPLGYAGVSHEAQQGDTSHQQPFRT
QPSLQTSTVQVQFGHLQKMKSNHLQQQQLPPASPPSGQKEKTHKQVIQQSLDIMHHQLEL
EEMKKDLELLLQAQGQSSLQLNQAKPPQHVQQTIVGQINYIVRQPASVQQQIQDEAQVCE
SSAEIEAQKPVIPFDKTDSSSLSQSVDEEAGVSSYSPESTMQLSAFHPVRKHSASLSILG
FSNSLEMESPSTRLSSSANAQTQGAGAGTLDPSLNVVCDCDVPPESVPSYSLASGRAPGD
LSPGAALDLTPSDAFQGTTKCKLENEDFNTVDHCLENSLATAGQDVVNELTLSMQKVLEE
PINLSIKKSQHCTSPSETLSNASFLPMNTRMRQLRSKEDSNNCEKEHFEMGMKSNQNVRA
GPEEQKIPYVRLQRLKIHTWEAGELPVFKLQPQDNEQDGNFLLIIECGTQSSSMSIKINK
DSPPEGLKSKESSEDGTFLTSQVARQIQSPPVDTLSVDQKLSNGISTTKKSPVTQEDNPI
ENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLCRNPVKPEVEYDCE
NTRYSHTYSAQYGLDDCDQKKCEKLVLSLFCSSMSLPFHEPVSPLARHYYQIIKKPMDLS
TIRKKLQKKDKSHYSAPEDLVTDVRLMFWNCAKFNYPDSEVAEAGRCLDVFFESKLKEIY
PDRDFPSMQQEDSDSEEVERQSSKMPAQDCQWPPYGQESIPPKRRRRHAXKKNPKRVMFQ
PANSLPPMTSARLEICYKESSSIIDRVKENGISMEVFQRQPDPEAMLIKFVVEVSEGIQV
SNAHSRDVTCASTIDRHESAGQGNRIDDL
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgagccatattgtggctcttcgtgttttcagtgtcaaacttcatccaacagaaatggag
agcctggatctgttgaggagctgtttggtatgcaaatgggacttgcagaggagagagccc
agaatgctaccttgccttcattccttctgtaaggactgccttccatatctgatccaagga
tacagctgtattcccactgagtatgaagttctgtatgaaggtatcctttcctgtcctgtg
tgcaaacagacctgctttgcaagggatgtagttgaaaatttccttctcaaggactttccc
actgctaattcagctatggcaaagagctgttccacatgtaaagagaagagacctgctcac
agtctctgtacaggctgcaataagtggttgtgcagctcctgtacggaggaacacaggcat
gaccaggaaactggagaccacttcctgtctgtatccctgaagggctgcacagcagctgca
gatgaagcaggtgaattgtccttattttgcccagtgcacacccaagagcccctcaagctg
ttttgtgagagctgcgataccctcacctgccgcagctgccttctgacagagcacaaggag
cacaggttcagacaccttgaggaagctctgcaaaatcagagagttatcctggaaaatgtc
ataactaaagtggaagagaaaaaaaatggggttcaggtttcagctagacagattgaggac
aggttgcttgaagtaaaacattcctacaaaagggtagaaaaccaaataaaaatggccaag
atgtttttgattaatgaaatcaataaacgaacaaacatccttcttgaacaacttgaaaaa
atcaccagcgaaaagaagcggaaattggagcaacaactgcaaagtgttgtggttttaagc
agacaagtagaacatgtgcagaacttcatcagctgggcagtgtgcagcaaaaacagcatc
ccatttctcttcagtaaagaactgattgtgtttcagatccaacgcttgttggagacaaac
tgtaacacagacacaggcccccctctgaagatcagatttacttgggatccctcctactgg
actaaacaactgtctaatttgggaggtttcactatggaaggtgggcacgtgtctcactca
gacgtgctagtctgtggaaacgtgcaaggattacagacctccttgtatcacgggcaccgt
tcaccagcatcacagctggagcctctgagtagccagccaccccagtttccacctgcagtt
cagtgccctacacctgtttgttgctcacactgcctcagtgtacctcacccaaacagagct
cagccctcttaccaagacatgaaccgccataaaagcttccgacaacctcctgagctgcac
cagcagcacttccctctgcagcagcagcaggacaaggagcagagggctgccctccagcct
atgaagataacacagcctgggctggaacagcagtcacgctcagagccagggaatgtgtct
ggctgggtgggaaagcacttgccatcccagcagctgcagcagacggcacccctgggttat
gctggtgtgtcccatgaggctcagcaaggtgacacgagccatcaacagccatttcgcact
cagccttctctacagacatcaactgtgcaagtgcaatttggtcatctccagaagatgaaa
tctaaccacttgcagcagcagcagctgccaccagcatcgccaccatcaggtcagaaggag
aagacccacaaacaagtcatccagcagagcctggacataatgcaccaccagctcgaattg
gaggagatgaaaaaggatctggagcttcttctgcaggcccaaggacagtccagcttgcaa
ctgaaccaagccaagccacctcagcatgttcaacagaccatagttggtcaaatcaactac
atagtgaggcagccagcctcggttcagcaacaaattcaagatgaagcacaggtctgtgaa
agttctgcagaaattgaagctcagaagcctgtaattccctttgacaaaactgatagttcc
tccctgtcacagtcagtagatgaagaagctggtgtcagcagttactcccctgagagcaca
atgcaactatcagctttccatccagtgagaaagcattcagcatccttaagcattctgggc
ttttcaaacagtttggaaatggagtcaccttcgacaaggttatccagttcagccaatgca
cagacacaaggagcaggtgctggaacacttgacccatccctgaatgttgtttgtgactgt
gatgttccaccagagtcagttccaagctacagtctggcatcaggcagagctccaggtgac
ctgagccctggggctgctctggacctcacaccaagtgatgcattccagggcaccactaag
tgcaagctggaaaatgaagacttcaatactgtagatcattgtctagaaaacagcttggct
actgctgggcaagatgtagttaatgaattaactctttctatgcaaaaagtgctggaagaa
cctattaatctttcaatcaaaaaatctcaacattgcacttctccttctgaaacactcagc
aatgcttctttcctgcctatgaataccagaatgagacaacttagaagcaaagaagattcc
aataactgtgaaaaagaacattttgaaatgggtatgaaaagcaatcagaatgtcagagct
ggccctgaggagcagaagatcccctacgtacgactgcaacgcctaaaaattcatacatgg
gaggcaggggagctccccgtgtttaagctgcagccacaggataatgagcaggatggcaat
ttcctcctgataattgaatgtgggacccagtcttcgagtatgtctataaagataaataaa
gacagtccacctgaaggactgaaatccaaagagagctcagaggatgggacatttcttaca
tcccaggtggccagacagatacagtctcctcctgtagatactctgtctgttgatcagaag
ctcagcaatggcatctccacgacgaaaaagtctccagttactcaggaagacaatccaatt
gaaaatgaggatttctgtgctgtgtgtcttaatggaggagaattgttgtgctgcgatcac
tgccccaaggttttccatctctcctgtcatgttccagccctgctcagctttccagtggga
gaatgggtgtgcacgctttgccgtaacccagtgaagccagaggtagaatatgactgtgaa
aacacacgctacagccacacctacagtgctcagtatggccttgatgactgtgaccagaag
aagtgtgagaagctggtgctttccctgttctgcagtagtatgagcctcccattccatgaa
cctgtcagccccctggctcggcattattatcagatcatcaaaaagccaatggatttgtca
accatacggaaaaagctgcaaaaaaaggacaagtcccactattctgcacctgaggacctt
gtgactgacgtgcgtctcatgttttggaactgtgcaaagttcaattatccagattcagag
gttgctgaggctggacgttgcctagatgtattctttgagagcaaactgaaggagatttat
ccagatagagattttccttcaatgcaacaagaagactctgattcagaagaagtggagagg
cagagtagcaagatgccagcccaggactgccagtggccgccatacgggcaggagagcatc
ccaccgaagaggaggcggcgccacgcttgaaaaaaaaaccctaaaagagtgatgtttcag
ccagctaacagccttcctcctatgacctctgcaagacttgagatttgctataaggaatcc
agcagcataattgacagagttaaggaaaatggtatcagcatggaagtgttccagaggcag
cctgatcctgaggcaatgcttattaaatttgttgtggaagtcagtgagggaatccaggtt
tccaatgcacattctagagatgtcacttgtgccagcactattgataggcatgaatctgct
gggcaaggaaatcgcatcgatgatctttag
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