Chaetura pelagica (chimney swift): 104385893
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Entry
104385893 CDS
T08631
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104385893 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
104385893 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
104385893 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
104385893
NCBI-ProteinID:
XP_009992707
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQFVIPQPSIEHRKVPQRIEEQGDASEDSSAGIPGMWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYQERSYRRPGRQFPASERTLAHQNSRHREDSLTAYP
GHIISAIRTSVPLHRNEEQLWAGLRASTSSGGQNNSHLSRGALRGSRHSQSQRQNAKAEK
RSRNRNPIGPGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRSHVFHQSPSLMNTYSQA
ASPSLQHGNLYQEESEPQAGHQVLGPSLYQSPSFPVSQSLFHSSNSNHHGPASHQSIQGQ
PQPPRAAAIVCIGAYKQYKLCNTNICPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVK
GSQKCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTSICVAGQCKSIGCDDYLGSDKVIDK
CGICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGR
SIINGNWAIDRPGRYEGGGTMFTYKRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPG
IHYEYIIPGDNVISPQLLAQRRPGEPLNGQLGIPESTNHEDEDLYRETATFTGQSAGAFP
VIQPGRFPSHQPENQVPAVQPPRQNREHNWKQIGKTECTTTCGKGSQYPIFHCVNRITHE
EVPESYCDSSTKPIPEEEACNLFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQMYANRT
LTVQQYRCHHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDIV
DDEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGDGVRTRSVVCMTNHISSLPL
EGCGNNRPSETSPCNNGPCAGKEEWFAGGWTQCSTECGSGTQQREVICVRKTEGNFDVLN
PYECSYLEKPPSQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMTASDQCD
PQLKPEEKESCNTQDCVPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVANRQ
SGFLGRR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttccctagcagtgctgggattt
cagtttgtcatcccacaaccttcaattgaacacagaaaggttccccagaggatagaagag
caaggagatgcatctgaggatagcagtgcaggaatcccaggcatgtggggcagttggggc
ccctggtctgcctgctctcggagctgcagtggcggagtgatggagcagacacggccctgc
ctcccagcctattaccaggaaaggagctaccgacggcccgggcggcagttcccagcctcg
gagaggactcttgctcaccagaattcccgccaccgagaggactcgctgactgcttatcct
ggccacatcatttctgccatccgtacatctgtaccacttcacaggaatgaagagcagctt
tgggctggccttcgggcctctacttcttctggaggccaaaataacagccacctgagcaga
ggagctttgagaggcagcaggcattcccagtcccagaggcagaatgctaaggcagaaaag
agaagcagaaacagaaatcctattggtccaggaaagtatggatatggaaaagtgccatac
attttacctttacaaactgatactggtcagcagcctcagaagcttcggaggcagcggcag
tcgtcaaggagccatgtatttcatcagagtccaagtctcatgaacacttacagccaggca
gctagtccttcacttcaacatgggaatctttatcaagaagagagtgagcctcaggctgga
catcaggtcctgggaccctcgctttatcagtcaccttcatttcctgtgtctcaaagcctg
tttcacagcagcaactcaaaccatcatggacctgcatcacaccagtccatccaggggcag
cctcagcctccaagagctgcagcaattgtgtgcattggtgcttacaagcaatataaactc
tgcaacacaaatatttgtcctgaaagcagcagaaatattagagaggtgcaatgtgcatca
tacaataacaagccatttatgggtcgattttatgaatgggaaccctttgcagaagtgaag
gggagtcagaagtgtgagctgaattgccgtgcgataggctacaggttctatgtgagacaa
gctgagaaggtgatcgatgggacaccctgtgaccagaacggaacgtccatctgcgtggca
gggcagtgcaagagcattggctgtgatgactatctgggttcagacaaagtgattgacaag
tgtggaatatgtggaggggacaacactgcttgcaaggttgtgtctggagttttcaaacac
acgctaacaaatcttggctaccacaagatagtggaaattcctgaaggagctactaaaatc
aacattactgagatgtcaaagagcaacaactatttggctctgcggagccggtcgggacgg
tccatcatcaatggaaactgggcaattgatcgacctgggagatacgaaggtggtgggaca
atgttcacttacaaacgcccaaatgaaatctccagcactgcaggagagtcatttttagct
gatggtccaacaaatgaagtccttgatgtctatatgatacatcagcagcctaacccaggt
atacattatgagtatatcattccaggagacaatgtcattagtcctcagttgcttgctcaa
agaaggccaggggagcccttgaatggtcagttaggaattccggaaagtacaaatcatgag
gatgaggatttgtatagggagacagctactttcactggacagtcagcaggagcatttcca
gttattcagccaggaagatttccttctcatcagccagaaaaccaggtgcctgctgtgcaa
ccaccaaggcaaaaccgagaacacaactggaaacagattggaaaaactgagtgcacaact
acatgtgggaaagggtcacagtacccaattttccactgtgtcaacagaatcactcatgag
gaggtacctgagagttactgtgacagcagcaccaaacccattccagaagaggaagcctgc
aacctcttcccttgtccagctttctgggatataggggagtggtctgagtgcagcaaaacc
tgtggccttggcatgcagcaccggcagatcctgtgccggcagatgtacgccaatcggacc
ctgacagtccagcagtaccgctgccaccacctggagaaaccagagacaaccagcacttgc
cagctgaagatctgcagtgaatggcagattaggacagagtggacttcatgttcagtgcct
tgtggagtggggcagaggacccgagatgtgaaatgtgtcagcaaccttggagacattgtt
gatgatgaggaatgtaacatgaagctgcggccaaacgatattgagaactgcgacatgggg
ccctgtgctaagagctggttccttacagagtggagtgacaggtgttctgcagagtgtggg
gacggggtccgcacacgctcggtggtttgtatgaccaaccacatcagcagtttgcccctg
gaaggctgtggcaacaacagaccctctgagacaagtccctgcaataacggaccctgtgct
ggtaaagaggagtggtttgctgggggctggacacagtgctctactgaatgtggcagtgga
actcaacagagagaagtaatttgtgttaggaaaactgaaggtaattttgatgttttgaac
ccgtatgaatgttcgtatttggaaaaacctccgagccagcaatcctgctacctcaaaccc
tgtgggtccaagtggtttcatacagaatggagcacatgttccaaatcctgtgaaggagga
tttcgagttcgagaggtacgatgtctatcagatgatatgacagccagtgatcagtgtgat
ccacagcttaaacctgaagaaaaagaatcatgtaacacacaagattgtgtccctgaaata
gatgagaactgcaaagataaatactacaattgcaatgtggtggtgcaggcccggctctgt
gtctacacctactacaaaacagcctgttgtgcatcctgtacacgtgtggcaaacagacaa
tcagggtttctagggcgcagataa
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integrated database retrieval system
