Chaetura pelagica (chimney swift): 104385939
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Entry
104385939 CDS
T08631
Symbol
USP8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04137
Mitophagy - animal
cpea04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104385939 (USP8)
04137 Mitophagy - animal
104385939 (USP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104385939 (USP8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104385939 (USP8)
04121 Ubiquitin system [BR:
cpea04121
]
104385939 (USP8)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104385939 (USP8)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104385939 (USP8)
Membrane trafficking [BR:
cpea04131
]
Endosome - Lysosome transport
Others
Others
104385939 (USP8)
Ubiquitin system [BR:
cpea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104385939 (USP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Metallothio_Pro
Motif
Other DBs
NCBI-GeneID:
104385939
NCBI-ProteinID:
XP_009992768
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MPAVASVPKELYLSTSLKDLNQKVDIKPEKTSAKSYVQSAIKIFKAAEESRLDRDEEKAY
ILYMKYVTVYKFLMKRPDFKQQQDYFHSLLGPTNFKKAVEEAERLSDSLKLRYEEAEVRK
KLEERDRQELQKKQEPKDDEKSSAKNSSESAVDSIGESQKINGERKHSLERKDQSDSLSA
SVFQGAVTPEKLFAMMSDKNIELIIMDARRLKDYQESCIPRSVSVPEEAISPGVTANWIE
ARLPEDSKDPWKRRGHFDYVILLDWFSSAEDLKLGTTLQSLKDALFKWESKTILKNEPLV
LEGGYENWLLCFPQYTTNAKVIPPQHSRSEAVTVSLDFTYPSLEEPTPVPPAVAIKPSTV
EVIENEQMGDNLEERLKSLNRPNIQDTAIPKSDSSLVVNPVSITRSIPEVDRTKKPSLKI
PDDKRPKSESTVNESQSLENGQVIPDRSTKPLRDAKSFLTEEERSQIHAETAALLEKNRR
EKELRERQQEEQRERLKREKEEQEQKAEEQKEKEQKEKLQQSKEDREQKERNEQIKREQE
EKEQERARKEAMEGKKQNKNELESIGAKRIEMDKMSVEEREKGTRTPEMQRRALGDASQT
SVTVPGKYTGVKGQPDSGAQKPGPLREDSEQDTERLKSQREPLIRARSEEMGRIIPGLPA
GWAKFLDPVTGTFRYYHSPTNTVHMYPPEMAPSSTPPSTPPTHKPKPQVTVEREREHSKL
KRSYSSPDITQAIQEEEKKRIPVTPAVNRDNKPVCYTKAEISRLSASQIRNLNPVFGGSG
PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRSNFLGHKGEVAEEFGVI
MKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRY
KEENNDHLDDFRAAELAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS
LPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKR
FSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCK
NASKQRWFKFDDHEVSEISASSVKSSAAYILFYTSYEQRAVDMAT
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtggcatctgtacctaaggagctctatctctctacttcattgaaagatctc
aaccagaaggtagacataaaacctgaaaagacaagtgcaaagagttatgtgcaaagtgcc
attaagattttcaaggcagcagaggaaagcagattggaccgagatgaagaaaaagcttac
atcctctatatgaaatatgtcactgtttataaatttttaatgaagagacctgattttaag
cagcaacaggattattttcattcccttcttggacctacaaattttaaaaaagctgttgaa
gaagctgaaagactctcagacagccttaaactgagatatgaggaagctgaagtacggaaa
aaactcgaagagagggacagacaagagctgcagaaaaagcaagaaccaaaagatgatgaa
aaaagttcagccaaaaactcctcagaaagtgctgtggattccataggagaaagccaaaag
attaatggcgagaggaagcattcattggaaagaaaggatcagtctgacagtctgagtgct
tctgtatttcaaggagcagtcacacctgaaaaactgtttgcaatgatgtcggacaaaaac
attgaattgatcataatggatgctcgaagactgaaggattatcaggaatcctgtattcca
agatctgtcagtgtcccagaggaagctatcagtcctggagttactgctaattggattgaa
gctagactcccagaagattctaaagatccatggaagaggagaggacactttgattatgtt
atactgctagactggtttagttctgctgaagacttgaagctaggaacaactcttcagagc
ctgaaggatgcactttttaagtgggaaagcaaaactatactgaagaatgaacctttagtt
ctagaaggaggttatgaaaactggctcctttgttttccccagtacacaacaaatgctaaa
gtaattccaccccagcacagcagaagtgaagcagtgactgtttctttggattttacgtat
ccatccctggaggagccaactcctgttccacctgctgttgctataaagccatctacagtg
gaagtgattgaaaatgaacaaatgggagataacctggaagagagactaaaatcacttaac
agaccaaacatacaggacactgctattccaaaatctgacagttcacttgtagttaatcca
gtatcaattacaagaagtattcctgaggttgatcgtactaaaaaaccctcactaaaaatc
cctgatgataaaagaccaaaatctgaaagtacagtcaatgaaagccagtctcttgagaat
gggcaagtaattccagaccggtccacaaagccactgcgtgatgcaaagagctttctaaca
gaagaagaaagaagtcagatacatgcagaaactgctgctctgttagagaaaaacagacgg
gaaaaagaacttcgggagaggcaacaagaggaacagagagagagactcaagcgagaaaaa
gaggaacaagaacaaaaagcagaagaacagaaagaaaaggaacaaaaagaaaagctacag
caatccaaagaggacagagaacagaaggagaggaatgagcaaataaaaagagaacaggag
gaaaaagaacaagaaagagcacgtaaagaagcaatggaaggaaaaaagcaaaataaaaat
gaactagaaagcattggtgcaaaaaggattgagatggacaaaatgtctgtggaagaaaga
gagaaaggaacccgaacaccagaaatgcagagacgtgcactgggtgatgcatctcagact
tctgtgactgttccaggcaagtatactggggttaaaggacaaccagacagtggagctcaa
aagccaggaccccttagagaggattctgaacaagatactgaaagacttaaatctcagcgg
gagccactaataagagcccgaagtgaagaaatgggaaggataataccaggactgcctgca
ggttgggcaaagtttctggatccagtcactggaacctttcgttactatcactcgccaaca
aacactgttcatatgtatccaccagaaatggctccttcatccactcctccatcaacccct
ccaactcataaacccaagccacaggtgactgttgaacgagaaagagaacactccaaactg
aagcgctcctactcttccccagatataacccaagccattcaggaggaagagaagaaaaga
attcctgtaactcctgccgtcaatcgtgacaataaaccagtttgttatactaaagcagaa
atttcaagactctctgcatcacaaattcggaatcttaatcctgtgtttgggggatcagga
ccagctcttacaggacttcggaatctagggaacacttgctatatgaattccattttacag
tgtctgtgcaatgcacctcacctggctgattattttaacagaaacttgtatcaagatgat
attaacaggtcaaatttcctggggcataaaggtgaagtggctgaagagtttggtgtaata
atgaaagctttatggacaggacagtataaatatattagtccaaaagactttaaaattaca
attgggaagattaatgaccaatttgcaggatatagtcagcaggattcccaagaactactt
ctctttctaatggatggcttgcatgaagacctaaataaagctgacaacaggaaaagatac
aaagaagaaaacaatgatcatcttgatgacttccgagcagcagaactggcctggcacaaa
cacaaacagctgaatgaatccatcattgtggcactcttccaaggccagttcaaatccaca
gtgcagtgtctcacatgtcacaagaagtcccggacctttgaggctttcatgtacctgtcg
ttaccactcgcatccaccagtaaatgcacattgcaggaatgccttagattgttctccaaa
gaggaaaagctcactgataacaatagattttactgtagccattgcaaaactcgaagagac
tctttgaaaaaaatagaaatttggaaattaccacctgttcttcttgtgcacttgaaacga
ttttcctatgatggaagatggaagcaaaagcttcaaacttctgtagatttcccattggaa
actcttgacctttcacagtatgttattggtccaaagaataacttgaagagatacaatctg
ttttcagtatcaaatcattatggtggattggatggagggcactatacagcctattgcaaa
aatgcttcaaaacaacgctggttcaagtttgacgaccatgaagtatctgagatctcagca
tcatctgtgaaatcctcagctgcatatattctcttttacacttcttatgaacagcgagca
gtggacatggccacataa
DBGET
integrated database retrieval system
