Chaetura pelagica (chimney swift): 104386012
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Entry
104386012 CDS
T08631
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104386012 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104386012 (MYO5C)
04131 Membrane trafficking [BR:
cpea04131
]
104386012 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cpea03029
]
104386012 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpea04812
]
104386012 (MYO5C)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104386012 (MYO5C)
mRNA cycle factors
P-body specific factors
104386012 (MYO5C)
Membrane trafficking [BR:
cpea04131
]
Others
Actin-binding proteins
Myosins
104386012 (MYO5C)
Mitochondrial biogenesis [BR:
cpea03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104386012 (MYO5C)
Cytoskeleton proteins [BR:
cpea04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104386012 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
104386012
NCBI-ProteinID:
XP_009992847
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MNIARYNRVWIPDNEEVWQSAEITKNYKPGDHFLCVQLEDGTELNYPVDPAALPPLRNPD
ILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDAIIHA
YSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFATVSKS
SSNARVEDKVLATNPITEAIGNAKTTRNDNSSRFGKYSEISFDQSYQIIGANMRTYLLEK
SRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTRMGGSPVIEGVDDRANMV
ETQKTFALLGLKEDFQMDVFKMLAAILHLGNVEITAVGDERSSISVKDEHLSIFCELLDL
NYDKMVQWLCHRKIITTSETVIKPMTRAQAVNARDALAKKIYSHLFDFIVERINQALQFP
GKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTL
IDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNTLFEKPRMSNT
SFIIQHFADKVEYKSEGFLEKNRDTVHEVLVEILKESKFHLCANFFQDNPVSISPFSSTI
NIKSARPVLKSPNKQLRTTVGSKFRSSLSLLMVTLNATTPHYVRCIKPNDEKLPFEFDSK
RVTQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELAINDKKQICKIVLQRL
IQDHNQFQFGRTKIFFRAGQVAYLEKLRSDRLRRACVAIQRRVRGWLQRRRFGRLRRAAL
TIQQYFRGQRTVRWQAITARTLKQTWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAYARG
FLARKKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEEKSR
ENHGLLERLTNLASTHANDMDTIQKLELDLEKITAQKRTYEEKGKKYKEDSEQKILKLEN
QNKELQEQKETLEIRLQEKTEEMKEKMDDLTKQLFNDVQREENQRMILEKNFQNQKQDYE
KEIELLKGEIKILKEEKTQLQHQIQQEIVIQDGLKMEVGQLTKQAQKIPELQKEIELLQT
QKLDTEKQAQSQKRELREKMSEVTKQLLESYDFEDVRSRLSEEDLEHLNEDGELWFAYEG
LKKATRVLESHFQSQKEVYEKEIEGLNFKVQHLSQDINHLQKLFREENDINDGIRLEVSR
LTSENLVIPDLKQQVSELENQKLELENRLQEQTVKLKGKMQEMSNRLHHELEGDRTHRLR
NESQNETDTEEKGRLRVTNHEIERLSNGLMEDEIQDEVKSKIKQETTRLTVENMDLEEKL
DMKDRIIKKLEDQIKTLTKTIGKTEAHVPALSKEYIGMMEYKKEDEERIVQNLILDLKPR
GVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVIKDHSEDFEMLSFWL
SNTYYFLNCLKQYSGEEEFMKCNTPLQNRNCLKHFDLSEYRQILSDLAIRIYHQFINVME
NNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQN
GLDSELLKQAVRQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSS
NAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTP
SFVRKVQAMLSNREDAPQLMLDTKYLFQVTFPFTPSPHALEMIQVPSSFKLGFLTRV
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagccaggtacaacagggtttggatccctgataatgaagaagtctggcagtct
gcagaaatcacaaaaaactacaaacctggagaccattttctctgtgtgcagctagaagat
ggaactgagctgaattaccctgtggatccagctgctttgccacccttaagaaatcctgac
atacttgttggtgaaaatgatctcactgcacttagttatctccatgaacctgctgttctg
cacaacctaaaagtccgttttgtggagtctaagcttatctacacctatagtggaataatt
ttggttgcaataaacccctacaagcagctgccaatatatggagatgctattatccatgcc
tacagtgggcaaaacatgggggacatggatccacatatatttgctgtggcagaagaggca
tacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagtggagagtcagga
gctggaaagactgtgtctgcaagatacactatgagatactttgccactgtgagcaagtca
agcagcaatgcacgggtggaggataaagtactggcaacaaatccaataaccgaggctatt
ggcaatgcaaaaaccacacggaatgataacagcagccgatttggaaaatacagtgaaatc
agttttgatcagagttaccaaataattggagctaacatgagaacatatctgcttgagaaa
tccagagttgtgtttcagtcagagaatgagagaaactaccatatattctatcagttgtgt
gcatctgccatgcaacctgaatttaagcatctgaaattgggaagtgcagaagaatttaac
tacacaagaatgggaggcagcccagtaatagaaggagttgacgacagagcaaatatggtg
gagactcagaagacatttgccttactgggtctgaaggaggattttcagatggatgttttt
aaaatgctggcagcaatcctacacttaggcaatgtggaaataacagctgttggagatgaa
agatcatccatcagtgtgaaagatgaacatctcagtatattctgtgaacttctggattta
aactatgacaaaatggtacaatggttgtgccaccgaaagattatcactacatcagagact
gtcataaagccaatgacaagagcccaggctgttaatgcaagggatgctctggcaaagaag
atctattcccatttatttgactttattgtggaaagaattaaccaagctttgcagttccct
ggcaaacaacacacttttattggtgttttagacatttatggctttgaaacgtttgatgtg
aacagttttgaacagttttgcatcaattatgctaatgaaaaactgcagcagcaatttaac
ctgcatgtgtttaaacttgaacaagaagaatatatgaaagaagatatcccatggacttta
atagatttctatgacaaccagcctgtcattgacctgattgaagctaaaatgggaattcta
gagcttttggatgaagagtgcctgttgcctcatggaaaagatgaaaactggcttcaaaaa
ttgtataataattttgtcaataaaaacacgctctttgaaaagccgaggatgtcaaacacg
tccttcatcattcagcactttgctgataaggtagaatataaaagtgaaggatttctggaa
aaaaacagagatacagtacatgaagtgttggttgaaatcttgaaggagagcaagtttcat
ctgtgtgcaaatttttttcaagacaatccagtgtccatttcacctttcagttcaactata
aacatcaaatctgcaagacctgttctcaagtcacctaacaaacagctccgaacgactgtt
ggcagtaagttccggagttctttgtccctgctgatggtgaccctcaatgccaccactcct
cactacgtacggtgcataaagccaaacgatgagaagttgccttttgagtttgattcaaaa
agagtgactcagcagctgcgagcatgtggtgttctggaaaccattcggatcagtgcacag
agctacccatccaggtggacttacattgagttcttcagccgttacagcattctgatgacc
cagcaggaacttgccatcaatgataaaaagcagatttgcaagattgttttgcagcggctc
atccaggatcacaaccagtttcagtttgggagaaccaagattttcttccgggcagggcag
gttgcctacctggagaagctgcgctcggaccggctgcgtcgcgcctgcgtggccatccag
aggcgtgtgcggggctggttgcagcgcaggcgcttcggccgcctccggcgcgcggccctg
accatccagcagtacttccgagggcagcgcactgtgcgctggcaagcaataactgcaaga
actctgaagcaaacgtgggcagctatcatcattcagaaatactgtcggggttacctggtc
cgtagactttgccagctcatccatgtggctgctgtaacaattcaagcttatgcaagagga
ttcctcgcaagaaaaaagtaccggaagatgcttgaagagcacaaggccgtgatcctccag
aaatacgcccgtgcctggctcgccaggcgccgcttccagaacatccgtcgcttcgtgttg
aacatccagctttcctacagggttcagcagctgcagaaaaagatagaagaaaagagcaga
gaaaatcatggcttgcttgaacgattaaccaatctggcttcaactcatgcgaatgacatg
gatacaattcagaaacttgaattagaccttgaaaagataactgctcaaaagagaacatat
gaagagaaagggaaaaaatataaagaggacagtgaacagaaaatcttaaaacttgagaat
cagaacaaagaattacaagaacagaaagagaccttagaaataagactccaagaaaaaacc
gaggaaatgaaagagaaaatggatgacctcacgaagcagctcttcaatgatgtacaaaga
gaagaaaatcagagaatgatacttgagaaaaatttccaaaatcagaagcaggactatgaa
aaggagattgaattgctcaagggagaaattaagattctgaaagaagaaaaaactcagcta
caacatcaaattcagcaagaaattgtcattcaggatggcttgaaaatggaagtaggacaa
cttacaaaacaagcacagaaaatacctgagttgcaaaaggaaattgaactgctgcagaca
cagaagctggacactgagaagcaggcccagtcacagaagagggagctgagagaaaaaatg
tcagaagttacaaaacagcttcttgaaagttatgattttgaagatgtaagaagcaggctt
tctgaggaggatctggaacacttaaatgaggatggagaactgtggtttgcttacgagggc
ttaaaaaaagctacaagagtgttggaaagtcatttccagtctcagaaagaagtatatgaa
aaggagattgaaggtttgaacttcaaagttcaacatcttagccaagatattaatcatcta
caaaaactgtttcgagaggaaaatgacataaatgatggtattcgacttgaagtcagcagg
ctgacctcagaaaacctggtgatcccagatcttaaacagcaagtttctgaacttgaaaat
caaaaattagagcttgaaaaccgtcttcaagaacagactgtaaagttaaaaggtaaaatg
caagaaatgtcaaatcggctgcatcacgagctggaaggggatagaacacacagactcaga
aatgagtcacagaatgaaacagacacagaagaaaaagggagactgagagtcacaaaccac
gagattgagaggctgagcaatggtttgatggaagatgaaatccaggacgaagtaaaaagc
aagataaagcaagaaacgactcgacttactgtggaaaatatggatcttgaagaaaaacta
gacatgaaagatagaataataaaaaaattggaggatcagataaaaactcttaccaagact
attggaaaaactgaagctcacgtgccagctctgtccaaagagtacattggaatgatggag
tacaaaaaggaggatgaagaaaggattgttcaaaatctcatccttgatttaaagccacgt
ggagttgtagtcaatatgatacctggcctgccagctcacatcctgttcatgtgtgtgagg
tatgcagattatctgaatgatgctgacatgctgaaatctttcatgaatgtaaccattgat
gggatcaaacaggttattaaggatcattcagaagactttgagatgttgtccttctggctt
tccaatacatactattttcttaactgcttgaagcagtacagtggagaagaggaatttatg
aagtgtaacactccactccagaataggaactgtttgaagcattttgatctctcagagtac
agacaaattcttagtgatttggccattcgtatctatcaccagttcattaatgtgatggag
aacaacattcagcccatgattgtaccaggcatgctggaatatgaaagtcttcagggaatt
tctggcttgaaacccacagggttccgtaaacgttcttctagtatagacgacacggacacc
tacacaatgacctccatcctgcaacagctcagctatttttacagcactatgtgccagaat
ggcttggactctgagcttctaaagcaggcagtgaggcagcttttctttctgattggtgcc
atcaccctcaacagtctcttcctccgcaaggacatgtgctcctgtagaaaaggaatgcag
ataagatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagcagc
aatgccaaagaaactttggagcctctatctcaagcagcctggctccttcaggtcaaaaag
atcacggatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcag
atagttaagatcctcaactcatacactcccattgatgattttgagaaacgagtgactccg
tcgtttgttcgtaaagtccaggctatgctaagcaatcgtgaggatgctccacagctgatg
ctggataccaaatatctctttcaagtgacgtttcctttcaccccctctccacatgccttg
gaaatgatacaagtccccagcagcttcaaacttggctttctcacaagggtttaa
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integrated database retrieval system
