Chaetura pelagica (chimney swift): 104386295
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Entry
104386295 CDS
T08631
Symbol
JMJD1C
Name
(RefSeq) LOW QUALITY PROTEIN: probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104386295 (JMJD1C)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104386295 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
C1_2
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
104386295
NCBI-ProteinID:
XP_009993181
LinkDB
All DBs
Position
Unknown
AA seq
2492 aa
AA seq
DB search
MHEVYRAMLAVKVYVEFDDLEWEKREWVKVYEDFATFLVEYQLVWVKRRDPSQTQGSKIK
QIQWPALIFKPLVGKSVYNSITAVEFLVDKQLDFITEDSAFQPYQDDVDSLNPVLRDNPQ
LHEEVKAWVKEQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMN
DQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANS
PRPAMNSQTAAPKQNSHQHQQQRNTRPNKRKGSDSSMPDEEKMKEERYDYIGRGENPKTK
NKHFLNKRRKPEEDEKKLNMKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSK
NNSKINGEEGKSQATEGVEQTLIDRRSPWDEVQEDKKHEETERLKSXQEKPSLHSAEQTT
PYEQNAKDPHVQEANAEKHHTVELKNEQFVPRPPTPKCVVDITNENNSDKESQDNAGGST
FGLQTVQKIESHSSDLKQQFTNANFLEARKQEADQSWVSSVVNKTDLIQPGVVKTLSVNE
HLNPEKEKVQYGSFMSSLNVASLTEESKLHKQSPVPDSVKSKPSASVDHPKTKSPDVKPK
FTQSSDTVKSKVSSQNSHATGLTRSASKTDHDLPRSSFHPVPARVSALEATKSPLIIDKN
EHFTVYRDPTLIGQEAGTNHISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGS
SAQAPLSAINTHPLSTASHHSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLAL
AHQQQQQMLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPET
PVNAEASLRRNTPSPWLHQPTPVTSADSLGLLSHIPVRPSSADPLRPLKLTTHSSPPLPK
SIVEHQKEELERKAFIEPSRSVTTAPVKTELEQSRAQAVKESHMHRHFADPMLNQLPRPP
QETGERLSKYKEEHRRILQESIEVAPFTAKMKALEGERENYSRVTSLSSSPKSHSVKYDK
DAERSVSELYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEASSAYVDKQTNCPST
AANAQSLPSYVSSLSKPPPLIKHQPESEGSASKIPEQLSQSVQSHSVNSFRSDNRSPTQL
SISSSNTLRSMPALHRAPVFHPPVHQTLEKKESSYSSLSPPTLTPVQPVNSGGSKIQELQ
KPPTLVPEPKEAQAVYKGTSEQNLSEMWKSSNAPNNEKVDWPVERMSGKSQSATASVIVR
PPSSTKYESVSVMQPASRDRVGERSSAVTNQADCLKTAEARETGRIILPNMNSDSARTQY
EKKFPAVSQGSVPRAVTPTTTMTCSTKTDVTASAATTTSVSSWGGSEVTLSLSNTVLACA
PPECAASRAASQAAAQPQECKVSTPAPVTPAAGKTGSPAQPSPGFSTSTDFVHLKKHKAA
LAAAQFKSSNTSETESNSVKNQTFSTSLPLDSAIVCNTINKANSVGSGQTSQASQPNYHT
KLKKAWLTRHSEEDKNTNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDGKILAEKFA
KEEKHPRRKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEV
KPNGVLSRSAKEKSKLKLQSGSNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNL
QKCRECRLFRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWT
HENYEDDELDVETSKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDA
CEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQII
PGSVLTDLLDAMHNIREKFEIKSHCQCTTKQSTQAGKLPAMNGVSQVLQNVLNHSNKISL
CMPESQQQNTPQKSETNGNTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENK
ECSSGKHSKEEKDQDNLESQNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAF
APVYSTGTASGKSGRSMPNILDDIIASVVENKIPPNRAPKINVKSEIQDEPKDDRKCVPD
DCSKLYEDIQYSWICDKHVLWLRDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKA
ESISLDFGNQQADILNCKDSIISNTNVKEFWDGFEDVSKRQKIKNGETALLKLKDWPSGE
DFKAMMPARYEDLLKSLPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDH
DIGTTNLHIEVSDVVNILVYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPG
ALWHIYAGKDADKIREFLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTC
TVIQFLGDAVILPAGALHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDD
KLQVKNILYHAVKEMVRALKIHEGEMEDMDEN
NT seq
7479 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtgtatcgagcaatgttggcagtcaaggtatatgtggaatttgatgacctt
gaatgggaaaaacgagaatgggttaaagtttatgaagattttgcaacctttttggtggag
taccagctggtctgggtgaaaagaagggacccaagccagactcagggatcaaagatcaaa
caaattcaatggcctgcattgatattcaaacccttggttggaaaaagtgtatacaattca
attactgcagtagaattccttgtggacaaacagctggattttataactgaagatagtgcc
tttcagccctatcaggacgacgtagacagtctaaacccagttctcagggataacccgcag
ttacatgaggaggtaaaagcctgggtaaaggaacaaaaggttcaggagatttttatgcaa
ggtccatactccttaaatggttacagggtgagagtgtacagacaggattctgccacccag
tggttcacaggtatcatcactcaccatgatctcttcacccgcactatggtggttatgaat
gaccaggtgttagaaccacagaatgttgatccttctatggttcagatgacctttctagat
gatgttgttcactctttgttgaaaggtgaaaatattggcatcacttcacggcgacggtct
cgttccaaccagaacagcaacacagtccacggtcattacacacgtgctcaagcaaatagt
ccccgaccagcaatgaattcccaaactgcagcaccaaaacagaactctcaccagcaccag
caacagaggaatactcggccaaataagaggaaaggctctgatagcagcatgcctgatgag
gagaagatgaaagaagaaagatacgattatataggtcgaggagaaaaccccaaaaccaaa
aataaacacttccttaataaaagaagaaaacctgaagaggatgaaaaaaaattaaacatg
aagagactgcggacagacaatatctcagattactctgagagcagtgactcagaaatctca
aataaacgattaacagattcatcctcagagcaaaattcagaaaatgagttaaaaagcaaa
aacaattcaaagataaatggagaggaaggaaaatcccaggctactgagggagtagaacag
acactaatagataggcggtctccatgggatgaagtccaggaagataaaaaacacgaagag
acagaaagactgaagtcantccaggaaaaaccttctctgcattcagcagagcagacaaca
ccttatgagcagaatgccaaggatccacatgttcaagaggccaatgcagagaaacatcat
actgtggaattaaaaaatgagcagtttgtacccaggcctcctactccaaaatgtgttgtt
gacattactaacgaaaacaactctgacaaggagagccaggataatgctggtggaagtacc
tttggtttacaaacagtgcagaaaatagaatctcacagcagtgatttaaaacagcagttc
acaaatgcaaatttccttgaagcaagaaaacaggaagctgatcaaagttgggttagcagc
gttgttaacaaaacggatttgatacaacccggggttgtaaaaacattatcagtaaatgaa
cacttaaatcctgaaaaagaaaaagtgcagtatggctcgtttatgtcttcgttaaatgta
gcttctctcacagaagagagtaaactgcataaacaaagtccagtccccgattctgtgaag
tcaaagcctagtgcttcagttgatcatcctaaaacaaagtcacctgatgttaagcctaaa
ttcacccaatcttctgatactgtgaagtctaaggttagttcccaaaacagccatgctact
ggattaacaaggtcagccagtaaaactgatcatgatttgcctaggtctagttttcatcca
gttccagctagagttagtgctctagaagctactaaaagtcctcttatcattgacaagaat
gaacatttcacggtgtacagggaccccactctgattggacaagaagcaggaactaatcac
atttcaccttatttgcatcagcataattatcctctgcattcctcatcccaccgaacctgt
ttaaatccaaatgctcatcatcctgcattaactggttcatcccatctgctagctgggtct
tcagctcaggctcccttgtccgctattaacactcacccccttagtactgcatctcaccat
tctgttcatcaccctcatctacttcctgcagtgttgcccggagtgcctgctgcctccttg
ctgggtggccatccacgtctagagactgctcatgctagcagcttaagccatttggcatta
gcacaccagcagcagcaacagatgttacaacaccagtctccacatcttcttggacaagct
catccttctgcttcctataatcagctagggctttatccaattatttggcagtatccaaat
ggaacacatgcttactcaggactcggtctgccctcctccaaatgggtccatccagaaact
cctgttaacgcggaggcttccttgagaaggaacactcccagcccttggctccaccagccc
accccagtgacctcagctgacagccttggtttactgagtcacattcctgtgcgaccgtcc
agtgcagatccccttcggcctctcaaactgacaacgcattccagcccaccattgcccaag
agtattgtagagcatcagaaagaagaattggagaggaaagcatttattgagccttcacgt
tctgttacaactgcaccagtgaagacagagctagagcaaagcagagcacaggcagtgaag
gagagccatatgcacagacattttgcagatccaatgttgaaccagctgccaaggccacca
caggagactggggagcgactgagcaaatacaaagaagaacacagacgaatactccaagaa
agtattgaagttgctccttttacagctaaaatgaaggcactggagggagagagagaaaat
tattccagggtaacatccttatcttcaagtcccaaaagccattcagtaaaatatgacaaa
gacgctgagcgctctgtgtcagaactgtataaaatgaagcattcagttccacagagtttg
ccgcagagtaactatttcaccaccctgtctaacagtgtagtaaatgagccaccaaggtcg
tacccatcaaaggaagcttcaagtgcatatgttgataagcaaactaattgtccttcaaca
gcagctaatgcccagtctctcccctcttatgtttcctccctttcaaaacctccaccttta
attaagcaccaaccagagagtgaaggctctgcaagcaagatacctgagcagctttcacag
tcagtgcagtctcattcagtaaattcttttagaagtgacaacaggagccctactcagttg
tcaatctcgtcttcaaatacactccggagtatgcctgccttgcatagagcccccgtgttt
cacccccctgtgcaccagaccctcgagaagaaagaaagcagctacagcagcttgtcacct
cccactctaacccccgttcaacccgttaattctggtggtagcaaaatacaggagttgcag
aaaccaccaactttagtgcctgagcctaaggaagctcaggctgtttacaagggcacttct
gaacagaatttatcagaaatgtggaagtccagtaatgccccaaataacgaaaaagttgat
tggcctgttgaaaggatgagtggaaagtcacagtcggctacagcatctgttattgtgcgt
ccgccttctagcacgaaatacgagagtgtatcagtgatgcagcctgcttccagagatcga
gttggtgagagatcttcagctgtgacaaatcaagcagattgcctgaaaacagcggaagcc
agggagactggaagaatcattctgccaaatatgaactcagacagtgctcgcacacagtat
gagaagaaatttccagctgtctcgcaaggcagcgttcctcgtgctgtcacccctaccaca
actatgacctgcagtaccaaaacggatgtcactgcctcagcagccacaaccaccagtgtg
tccagctggggtggttcagaagtgaccttatccttatcaaacacggtgctggcctgcgcg
ccgccggagtgcgcggcctcccgagcggccagccaggcggcggcgcagccccaggaatgc
aaggtcagcactccggctccggttacacccgctgctggcaagacaggcagccctgctcag
cccagcccagggttctccacctccactgacttcgtccatttgaaaaagcacaaggcagcc
ttggctgcagctcagtttaaaagtagtaacaccagtgagaccgagtccaactctgtgaaa
aatcagacattttcaacctctctccccctagacagcgcgatcgtctgtaacacaataaac
aaagcgaactctgtaggcagtgggcagacttcccaggcaagtcagccaaactaccacact
aaactgaaaaaggcttggctaaccagacattcggaggaagataaaaacactaataaaaaa
gagaattcagggaacagtgtttcagaaattattaagccatgcactgtcaatttaatagct
tctacatcaaatgatttgcaaaataacatagatggtaaaatcttggcggagaagtttgca
aaggaagagaagcaccctaggaggaaagcaaaaagaacttatgagtctggctctgaaagt
ggggactctgatgaaagtgagagcaagtcagagcaaaggactaaacggcagcccaagcca
acttacaaaaagaaacaaaacgatttgcagaaaaaaaagggtgatacggaggaagaagta
aaaccgaatggtgttcttagcaggagtgccaaagaaaaaagcaagctgaagttacagagc
ggcagtaacactggtatacctcgctcagtgttaaaagattggcgcaaagtaaagaagctg
aagcaaacaggagagtcctttttgcaggatgattcttgctctgaaataggaccaaatttg
caaaaatgcagagaatgtaggttattcagaagtaagaaaggagaagaaccaactcactca
ccagtgttttgtagattttactactttcggcggttatcttttagtaagaacggagtggtt
aggatagatggtttctcctctcctgatcagtatgatgatgaagcactgagtttatggacg
catgaaaactatgaagatgatgaactggacgtagaaacttctaaatacattttagatatc
ataggtgataaattctgccagttggtaacatctgagaaaacagccatgtcgtgggtgaag
aaggacgccaaaattgcatggaagagagcagtgagaggagtccgtgagatgtgtgatgca
tgtgaagccacattatttaacattcattgggtctgccaaaaatgtggatttgtggtctgc
ctggattgttacaaggcaaaggaaagaaaaagttctagagataaggagctatatgcctgg
atgaagtgtgtgaagggacagccccatgatcacaaacacctgatgccaacacagattatt
ccaggctctgttttgacagatcttctagatgctatgcacaatattagagaaaaatttgaa
attaaatcccattgtcagtgtaccaccaagcaaagcacacaagctggcaagctccctgca
atgaatggtgtgtctcaggttttgcagaatgtcctgaaccacagtaataaaatttccctg
tgcatgcctgagtctcaacagcagaacactcctcagaagtctgagacaaatggtaatacc
agtccaaggagtgatgtgagcacagacagcaaactaacaccacctgagtcccagtcacca
ctgcattggttagctgatcttgcagagcagaaagccagagaagaaaagaaagaaaacaaa
gagtgttcttctggaaaacattcaaaggaagaaaaagaccaggataatttggaatcccag
aactgtaaaagctcccctcctgcatcccagaacaatgaacagggctcaaccttaagggat
ttattaactacaacagcaggcaaactgcgtctaggctctacggatgctgggattgctttt
gctccagtttactctacaggaacagcaagtggcaagagtggaaggtctatgccaaatatt
cttgatgacataattgcttcagtagtagaaaacaagattccaccaaatagagcaccaaag
ataaatgtaaaatctgaaatacaagatgagccaaaagatgatagaaaatgtgttccagat
gactgcagtaaactgtatgaggatattcagtattcatggatctgtgataaacatgttttg
tggctcagagaccacaaaaacagcaacaactggaagctcttcaaagagtgctggaaacaa
ggaaggcctgttttagtgtctggtatgcataagaaaatgaatttcagcctgtggaaagcc
gagtcaatcagtctagattttggaaaccagcaggctgatatcttgaattgcaaggacagt
attatttcaaacaccaatgtcaaggagttctgggatggttttgaagatgtttcaaagcgg
cagaaaataaaaaatggggaaacagctctactaaaactgaaagattggccttctggtgaa
gatttcaaggctatgatgccagcaaggtatgaggacttacttaaaagtttacccttgcct
gaatattgtagtccagaaggaaaattaaacttggcttctcacctgccaggattttttgtc
cgtccagatctgggacccagactatgcagtgcatatggtgtggctgctactaaagaccat
gatataggaaccacaaatctccatattgaagtttctgatgtcgtgaacatccttgtttat
gttggcatagcaaaaggaaatggagtactttccaaatcaggagttttgaagaagtttgaa
gaggaagacttggatgaccttttaaggaagagactgaaagattcaagtgaattacctggt
gctttatggcacatttatgctggcaaagatgctgacaagataagggagtttctgcaaaag
atagcaaaggagcaaggcttggaggtgttaccagagcacgatccgatacgtgaccagagt
tggtacgtgaacaaaaaacttcgccaaagacttcttgaggaatatggagtaaaaacctgt
acagttatccagttccttggtgatgctgtcattctaccagcaggagcacttcatcaggtg
caaaattttcacagctgcgttcaagtaaccgaagactttgtgtctccagaacaccttgta
cagtcatttcacttaacgcaggagctgaggctgtccaaggaagaaatcaattatgatgat
aaactgcaggttaaaaatatcctgtatcacgcagttaaagaaatggtgagagctctgaag
attcatgaaggtgaaatggaagatatggatgaaaactaa
DBGET
integrated database retrieval system
