Chaetura pelagica (chimney swift): 104386311 Help Entry 104386311         CDS       T08631                                  Symbol CDH23 Name (RefSeq) cadherin-23   KO K06813   cadherin 23 Organism cpea  Chaetura pelagica (chimney swift) Brite KEGG Orthology (KO) [BR:cpea00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cpea03037]     104386311 (CDH23)    04515 Cell adhesion molecules [BR:cpea04515]     104386311 (CDH23) Cilium and associated proteins [BR:cpea03037]  Primary cilia and associated proteins   USH complex and associated proteins    104386311 (CDH23) Cell adhesion molecules [BR:cpea04515]  Cadherins   Major cadherins    104386311 (CDH23) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Fibulin_C PCDH15_12th Motif Other DBs NCBI-GeneID:  104386311 NCBI-ProteinID:  XP_009993197 LinkDB All DBs Position Unknown AA seq 3358 aa AA seqDB search MDFEIEGFADTSSLWEGLLGRGNRLPYFINYFFDTYLLINEDTPVGSSVTQLLARDLDND PLVYGVVGEEASRFFAVESETGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGSVNIQVG DVNDNAPRFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSDFFAIDSG RGIVSVIRELDYEVTQAYQLQVNATDQDKHKPLSTLANLAIIITDVQDMDPIFINLPYST NIYENSPPGTTVRMITAVDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPLDREN PFYSSGFILTVKATELNDDRTPSNATVTTTFNILVIDINDNAPEFNSSEYSVSIPELAQV GFALPLYIQVQDKDEGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLDFETIP RYEFSLFANESVPDHVGFARVKINLINENDNRPVFSKALYNVSLFENATVGTTVLQVHAT DNDVGTYGKVSYFFSDDPDRFSLDKDTGVVLLTARLDFETTQRYTLTVIARDGGGEETTG RVRINVLDVNDNIPTFQKEAYLGALRENEPSVTQVVRLRASDEDSPPNNQITYSIVEASA FREYFDITVSEGYGVISVNHPLDYEQVANGVIYLTVMAKDAGNPPLNSTVPVTIEVFDEN DNPPMFSKPSYVIAIMEDIMAGATVLFLNATDMDKSREYGQESIIYSLEGSSHFRINARS GEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKDEPYFI NLVEMTPPNSDVTTVVALDPDLGENGTVVYSIRPPNKFYSINSTTGKIRTTGVLLDRENP NAQEAQLMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFTAEIAEGLPA GSSVFQVVAIDLDEGPNGQVTYRMQVGMPRMDFLINSTSGLVTSTTVLDRERISQYYLRV VASDAGVPSKSSTSTLTVKVLDVNDESPTFFPAIYNVSLPENVARDFKVVRLNCTDADIG LNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASYTLILEAIDNGPSGNRRTGT ATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAASSIVQVQATDADEGINGRVWYRIVKGN EHNHFRINPSTGLVMRGVRQLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVYVEDVNDEV PVFTQRQYSRLGLRETAGIGTSVAVVRATDRDTGNGGLVSYKILSGAEGKFEIDESTGLI TTIDYLDYETKTSYLMNVSATDQAPPNNQGFCSVYVSLLDELDEAVQFSNSSYEAVIMEN IPLGSEVLRVQARSIDNLNQITYKFDPNTNAQALSLFKINGITGVITVKGQVDREKGDFY TLTVVADDGGPKVDSTVKVTITVLDENDNSPQFDITSDSSVSVAEDVAVGKRVALVLARD PDAGSNGQVTFSLASGNIGQAFEIRTTNNTYGEVFVARPLDRELLDHYTLRIQASDAGVP PRRKEHTLRVNILDVNDNPPIIDSPFGYNVSVSENVGGGTAVVQVRATDRDAGLNSVLSY YITRGNEDLTFRMDRVTGEIATRPSPPDRERQSFYSLVVTVEDEGNPSLSATTMVYVTIL DENDNAPAFQQQLYEVTLDEGPDTLNATLVTLQALDQDEGPNGTVAYAITEGNILDTFHI DSTTGEIRTVKELDYEISHGRYTLIVTATDQCPVISRRLTSTATVLVNLNDINDNCPTFP RPYEGPFDVTEGQPGPRVWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGELRVRK DAELDRENIPFYNLTIAARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNLTLSENAP VSSFVTRVLARDADQGPNALLTFDITSGNTENTFYINSTSGVVYVNRPLDRERVAEYRLT VTVKDNPENIRNARRDFDLLVISIADENDNRPLFTQSSYQAEVMENSPPGTPVTMLNGPI LALDGDEGSNAVVTYQLLETSLDLFVINNRTGVVSVKPGRVIDREALLDPHLEYTLVARD AGGLNSTASLAVTILDDNDNRPIFQPASLTAWLRENSPPGFSILQVTATDADSGLNQQLD YRIESGGQDRFLIDATTGVIRVANISIDREERDAYRLTVVAVDQGTPPLSGTATISLFIQ DVNDCRPEFINPIQTVSVPESAPPGTVVAEVTAIDRDLHPRLEYYLLEIVARDDTDALVP DQQGAFEVDFRTGAVKIKNSLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNVLD VNDNTPRFRPFGVTYFTERILEGATQGTTLISISAVDPDKGANGQITYERLNLSPEGYVC LEDQSAGKVVANRTVDYEEVQWLNFTIRASDNGSPRRSAEIPVYLEIVDINDNNPVFSQP SYQKAVFEDVPLGTVILRVKATDADSGRFALIQYSLGDGEGKFGINPNTGDIYILSALDR EKKDHYTLTAVARDNPGDISSNRRENSVQLCFVAGVLDINDCRPQFSGSQFSTSVYENEP AGMSVITMTATDLDEGDNGVVTYSIEGPGAEAFKINKVSGLITTRRRLQSYERFNLTVVA TDKGHPPLWGTTMLHVEVIDINDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYATDKDEG LNGAVLYSLLKTGVGSKDWEYFSIDSVSGLIQTAMRLDREKQAVYNLIIVASDQGQPAYE TMQPLQVTLDDIDDNEPLFLRPPKDSPQYQVLSVPEHSLPGTLVGNVTGAVDADEGSNAI VYYFIAAGNQESNFQLSREGKLQVLRDLDREKEPYYSIIVKASSQRNWSPPQDQQEGSAQ LWDLSQDLTLQEVRIFLDDINDQSPQFTKSEYTAGVATDAKVGSELIRVVAVDADVGNNS LVLYNILGIRYIKQHSNDSEEVANIFSIGTLDGILRTFDLFTAYNPGYFVVDIMASDLAG HNDTAIVGIYILRDDQRVKIIINEIPDKVRHFEEEFISLLSNITGAIVNTDDVQFHVDKK GRVNFAQTELLIHVVNRETNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARAP DDLSALQMAIIVLAVLLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPN TNKYSFDGANPVWLDPFCRNMELAAQAEHEDDLPENLSEITDLWNSPARTHGTFGREPSA AKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLKVVLDDYMRLKKLFAQRMVLKATS SQGDRSSVSELIQKELEEEEGEHSPGQGSLRFRHKQPVELKGPDGIHVVHGSTGTLLASD LNSLPEDDQKVLGRSLETLTTDCGGYGDPNARTESAKSTPLHKMREVIMESPLEITEL NT seq 10077 nt NT seq  +upstreamnt  +downstreamnt atggattttgagatcgaggggtttgcagacaccagttccctgtgggaagggctgcttggc cggggcaacaggctgccatacttcatcaactacttctttgacacctacctgctgatcaac gaggacactcctgtgggttcctcggtgacccagttgctggccagggacctggacaatgac cctctggtctatggtgtggttggggaggaggccagtcggttcttcgcggtggagagcgag actggggttgtctggctcaggcagcccctggacagagagactaagtcggaattcacggtg gaattttccgtcagtgacagccaaggggtgatcaaagggagcgtgaacatccaagtggga gatgtgaatgacaacgccccacggttccacaaccagccctacagcgtccgcatcccagag aacaccccggtgggcactcccattttcattgtgaatgccacggatccagaccagggagca ggaggcagtgtgctctattccttccagcctccttcagatttctttgccatcgacagcggc cgcggcatcgtgtcggtgatccgggagctggactatgaagtgactcaggcctaccagctc caggtcaatgccacggaccaagataaacacaagccactctccactctggctaacctggca atcatcatcacagatgtgcaggacatggaccccatcttcatcaacctgccctacagcacc aacatctacgagaactcacctccgggcaccactgtgaggatgatcacagcagtggaccag gacaagggccgtccccggggcatcggctacaccatcgtctcaggtaacaccaacagtatc tttgcactggactacatcagtggagccttaaccctgaatggacctctggacagggaaaac cccttctatagctctggattcatcctcacggtgaaggccacagagctgaacgacgaccgc acgccctccaacgccaccgtcaccaccaccttcaacatcctggtcatcgacatcaacgac aacgcgcccgagttcaacagctccgagtacagtgtgtccatcccagagctggcccaggtg ggctttgcccttcccctctacatccaggtgcaggacaaagatgagggacccaacagcgtt tttgaggtttacctggtgggcaacaactccaaccacttcatcatctcccccacctccatc caggggaaggcagacatccgggtgcgcgtggcggtgcccctggacttcgagaccattcct cgctacgaattctcactctttgcaaacgagagcgtcccggaccacgtcggcttcgcacgg gtgaagatcaacctcatcaacgagaacgacaaccgccctgttttcagcaaggccctgtac aatgtcagcctctttgagaacgccaccgtgggcaccactgtcctccaggttcacgccact gacaatgatgttggcacgtatgggaaagtcagttactttttcagcgatgaccctgaccgt ttctccctggacaaggacacaggggttgtcctcctgacagcccggctggacttcgagacc acccagcgctacaccctgacggtcattgcccgggatggaggtggggaggagaccacgggg agagtccgcatcaacgtcctcgacgtcaacgacaacatccccaccttccagaaggaggca tacctgggggccctgagggagaacgagccctctgtcacccaggtggtccggctccgggcc tcagatgaggactcccctcccaacaaccagatcacctacagcatcgtggaggcgtctgcc ttccgcgagtacttcgacatcaccgtgtcggaagggtacggagtgatcagtgtgaaccac ccccttgactatgagcaggtggccaacggggttatttacctgactgtgatggccaaggat gctggcaacccaccgctcaacagcaccgtccccgtcaccatcgaggtgtttgatgaaaac gacaacccccccatgttcagcaagccctcctacgtgatagccatcatggaagacatcatg gcaggagccacagtgctgttcctcaatgccacggacatggacaagtccagggagtatggg caggagtcaatcatctactccctggagggctcctcacatttccggatcaatgctcgctca ggagaaatcaccacgacatctttgctggaccgggaggccaaatccgaatacatcctgatt gtgagggcagtggatggaggtgtgggccaccaccagaagacaggcattgctatggtgaac atcacgctgctggacatcaatgacaactatcccacctggaaggatgagccctacttcatt aacctggtggaaatgaccccccccaactcggatgtcaccacggtggtggccttggaccca gacctgggggagaatggcacggtggtctacagcatccgaccccccaacaagttctacagc atcaacagcaccacgggcaagatccgcaccaccggggtcctgctggacagggagaacccc aacgcccaggaggcccagctcatgaggaggatcgtggtgtctgtcactgactgcgggcgg ccacccctgagagccactagcagtgccactgtttttgtcaacctcctggacttgaacgac aatgaccccactttccagaacctgcccttcactgctgagattgccgagggccttccagcc ggctcctccgtctttcaggtagtggccatcgacctggacgagggtcccaacgggcaggtg acctaccgcatgcaggtggggatgccccgcatggatttcctcatcaacagcaccagtggg ctggtcacctccaccaccgtgctggacagggagaggatctcccagtactacctacgggtg gtggccagcgatgctggcgtgccctccaagagctccaccagcaccctgactgtcaaagtc ctggatgtgaacgacgagagccccaccttcttcccagccatctacaacgtgtccctgccc gaaaacgtggcccgggatttcaaagtggtccggctcaactgcacggatgctgacattgga ctgaatgctgagctcagctacttcatcacgggtgggaaccaggatggcaaattcagtgtt ggcttcagggatggagtggtcaggacagttgtgagcctggacagggagaccgtggcatcg tacacgctgattctggaggccatcgacaacggccccagcgggaaccgccgcacgggaact gccaccgtctacgtgacagtcctggatgtcaatgacaaccgacccatcttcctgcagagc agctatgaagtcagtgtccccgaggacatcccagctgccagcagcatcgtgcaggtgcaa gccacagatgcagatgaaggcattaatgggagagtgtggtacagaatcgtcaaggggaat gagcacaaccacttccgcatcaatcccagcaccgggctggtgatgcgcggcgtgaggcag ctggacagggagcagaactcctcccacgtcctggaggtggaggcctacaacacagagcag ggacccatgaggagctctgtgagggtgattgtctacgtggaggacgtcaatgacgaggtg ccggtgttcacccagcggcagtattcccgcctggggctgcgggagacggcgggaataggc acttcagtggccgtggtccgggccaccgaccgagacacggggaatggtggtctggtgagc tacaaaatcctgtcaggtgctgaagggaagtttgagattgatgagagcacgggcctcatc acgacaatcgactacctggactacgagaccaaaaccagctacctgatgaacgtctctgcc acggaccaggcaccccccaacaaccagggcttctgcagcgtgtacgtcagcctgctggac gagctggatgaggctgtacagttctccaacagcagctacgaggccgtgatcatggagaac atccctctgggctccgaggtgctccgggtccaggcccgatccatcgacaacctcaaccag atcacctacaagtttgaccccaacaccaacgcccaggcgctctccctcttcaaaatcaac gggatcactggtgtgatcactgtcaaaggccaggtggatcgagagaaaggggatttctac accttgacggtggtggctgatgatggaggaccaaaggttgactccacggtgaaggtgacc atcacagtcctggatgagaacgacaacagcccccagtttgacatcacctccgactcatcg gtgagcgtggcagaggacgttgctgttggcaaacgggtggccctggttctggcccgtgac cccgacgcaggcagcaacgggcaggtgaccttctccctggcatcagggaacatcggccag gcttttgagatccgtaccaccaacaacacctatggagaggtgtttgtggcacggcccctg gaccgggagctgctggatcactacaccttacggatccaagcctcagatgctggcgtccct cctcggaggaaggagcacactctgagggtcaacatcctggatgtcaatgacaaccctccc atcattgacagcccctttggctacaacgtgagcgtgagcgagaacgtcggtggtggaact gccgtggtccaggtccgtgccaccgaccgggatgctggcctcaacagtgtcctctcctac tacatcacccgtgggaacgaggacctgaccttccgcatggaccgtgtcacgggagagatc gccacccgaccctccccgcccgaccgcgagcggcagagcttctacagcctggtggtcact gtggaggatgagggcaacccctccctgtcggccaccaccatggtgtacgtcaccatcctg gacgagaacgacaacgctcccgctttccagcagcagctgtacgaggtgaccctcgatgaa ggtcctgacacccttaatgccaccctggtcaccctccaggccctggaccaggacgaggga cccaatggcacggttgcctatgccatcaccgaaggcaacatcttggataccttccacatc gacagcaccacgggggagattcgcacggtgaaggagctggactatgagatcagccacggg cgctacaccttgatcgtcaccgccaccgaccagtgccccgtcatctcgcgccggctgacg tccaccgccacggtgctggtgaacctcaacgacatcaatgacaactgtcccaccttccct cggccgtacgagggtccctttgatgtcacggaagggcaacctggcccacgtgtctggacc ttcctggcccacgatggtgactcgggacccagcgggcaagtggagtacagcatcattgct ggagacccccttggggagtttgtcatctccccggtggaaggggagctgcgggtgcggaag gacgccgagctggaccgcgagaacatccccttctacaacctcaccatcgctgcccgggac aggggtgtgccccctctcagctccacaatgctggtgggcatccgtgtgctggacatcaac gacaatgaccccgtgctcctcaacctcccaatgaacctcaccctgagtgagaacgcccct gtctccagctttgtcacccgtgtcctcgcccgagacgcggaccaggggcccaacgctctc ctgacttttgacataacctcaggcaacacagagaacaccttctacatcaacagcaccagt ggtgttgtctacgtcaaccgcccgctggacagggagagggtggcagagtacaggctgact gtcacagtgaaggacaaccccgagaacatccgcaatgccaggcgggattttgacttgctg gtcatttccatagcggatgagaatgacaaccgtcccctcttcacccagagctcctaccag gctgaggtgatggagaactcacccccggggactccagtcacgatgctcaatggacccatc ctagccctggatggtgacgagggcagcaatgctgtggtgacctaccagctcctggagaca tccctggacctctttgttatcaacaacaggacaggtgttgtttcggtgaagcctggccgt gtgatagaccgagaggctttgctggaccctcacctggagtacaccctggtggctcgtgac gcgggggggctgaacagcactgccagcctggcagtgaccatcctggatgacaatgacaac cggcccatcttccagccagcatccctcacggcgtggctgagggaaaacagccccccaggc ttctccatcctccaggtgacagccacggatgctgacagcggcctcaaccagcagctggat taccggatcgagagtggtggccaggacaggttcctgattgatgccaccacgggggtgatc cgtgtggccaacatcagcatcgaccgggaggagcgggatgcctaccggctaacggtggtg gccgtggaccagggcacaccccctctctccggcactgccaccatcagcctcttcatccag gacgtcaacgactgccggcccgagttcatcaaccccatccagaccgtcagtgtccccgag tcagctccccctggcaccgtggtggccgaggtcaccgccatcgaccgggacctccaccct cgcctggagtactacctgctggagatcgtggcccgcgacgacacggatgctctggtgccc gaccagcaaggagcatttgaggtggattttcggacaggagctgtgaagatcaaaaactct ctcaaccgggaactggtggccacctacgaggtcaccatctccgtccatgacaatgccagt gaagtcatcgaccgctcagtcagcgtgcccaacgccaagctgacagtcaacgtcctggat gtcaatgacaacacgcctcgcttccgccccttcggggtcacctacttcaccgagaggatc ctggagggagccacccagggcaccacactcatctccatctccgcagtggacccagacaaa ggtgccaatgggcagatcacttacgagcggctgaacctctcaccagaaggctacgtctgc ctcgaggaccagtcggcagggaaggtcgtagccaacaggacggtggactatgaggaggta cagtggctgaacttcaccatccgagcttctgacaatggatctccccgcagatcagctgag atccccgtgtacctggagatagtggacatcaatgacaacaaccctgttttcagccaaccg tcctaccagaaagctgtctttgaggacgtgccactggggactgtcatcctgagggtcaag gccactgatgcggattcggggcgttttgctctcatccagtacagcctgggggatggagag ggcaaatttgggataaatcccaacacgggtgacatctacatcctgtcagccctggaccgg gagaagaaggatcactacacactgacagccgtggccagggataaccctggggacatctcc agcaaccgccgggagaactccgtgcagctgtgctttgttgcaggagtcctggacataaat gactgcaggccccagttcagcgggagccagttcagcaccagcgtctatgagaacgagccg gcggggatgtcggtgatcaccatgactgccaccgacctggatgaaggggacaacggtgtg gtgacctacagcatcgagggccctggagcagaggccttcaagatcaataaagtctctggg ctcatcacaacccggcggcgcttgcagtcctacgagaggttcaacctgaccgtggtggcc acggacaaggggcaccctcctctctgggggaccaccatgctccacgtggaggtcattgac atcaatgacaaccgccccgtctttgtccgcccacccaatggcaccatcctgcacatcaag gaggagatccccctgcggtccaacgtctacgaggtctacgccacggataaagacgagggc ctcaacggggcggtgctctacagcctgctgaaaactggggtggggagcaaagactgggaa tatttcagcatcgactcagtcagcgggctgatccagacggccatgagactggaccgggag aagcaggcagtgtacaacctgatcattgtggccagcgaccagggccagccagcctatgag accatgcagcccctccaggtcaccctcgatgacatcgatgacaatgaacccctcttcctc aggccacctaaggacagtccccagtaccaggtgctctccgtccctgagcactccctgcct ggcaccctggtggggaatgtcaccggggcagtggatgcagatgagggctccaacgccatc gtctactacttcatagcagctgggaaccaggagagcaacttccagctgagccgggagggg aagctgcaggtcttgcgagacctggaccgggagaaggagccatactactccatcattgtc aaagcttccagccagaggaactggtcccctcctcaggaccagcaggagggcagtgcccag ctctgggacctcagccaggacctgacccttcaggaggtgcggatcttcctggatgacatc aatgaccagtccccccagttcaccaagtcggagtatacagcgggggtcgccactgacgcc aaggtgggctcagagctgatcagagtggtggccgtggatgccgatgtgggcaacaacagc ctggtcctgtacaacatcctgggcatccgctacatcaagcagcactccaacgactctgag gaagtggccaacatcttcagcatcggaacccttgacgggatcctgcgaaccttcgacctc ttcacggcctacaaccctggctactttgtggtggacatcatggcctccgacctagcaggc cacaacgacacagccatcgtggggatttacatacttcgggatgaccagagggtcaaaatc atcatcaacgagatcccagacaaggtcaggcactttgaggaggagttcatcagcctgctc tccaacatcacgggtgccatcgtcaacacggatgacgtgcagttccatgtggacaagaaa ggtcgggtgaactttgcacagacagagctgctgatccacgtggtgaacagggaaaccaac cgcatcctggacgtggagagggtgattcagatgatagatgagaacaaggagcagctgagg aacctcttcaggaactacaacgtgctggacgtgcagcccgccatcaccgctcgggcccca gatgacctctcggctctgcagatggcaatcatcgtgctggctgtcctgcttttcctggca gccatgctcttcatcctcatgaactggtactaccgcacagtgcacaaaaggaagctgaaa gccatcgtggctggctccacgggaaacagaggcttcatggacatcatggacatgccgaac accaacaagtactcctttgatggggccaacccggtgtggctggaccccttctgcaggaac atggagctggcagcacaagcagagcacgaggatgacctgccggagaacctgagcgagatc accgacctctggaacagccctgcccgcacccacgggaccttcgggagggaaccctcggcg gccaagcccgaggatgaccgctacctgcgggcagccatccaggagtatgacaatattgcc aagctggggcagatcatgcgggagggacccatcaagggctctctcctgaaggtggtcctg gatgattacatgcgcttgaaaaagctctttgcccagcggatggtgcttaaggccacctcc agtcagggggaccgctcctcggtctcggagctgatccagaaggagctggaggaggaggaa ggcgagcacagcccaggccaaggcagcctccgcttccgacacaaacaaccggtggagctg aaaggtcctgacggcatccacgtggtgcatggcagcacgggcaccctgctggcttctgac ctcaacagcttgcctgaagatgaccagaaggtgctgggtcgctccttggagactctgacc accgactgtgggggctacggggaccccaacgcccgcaccgagtcggccaagtccaccccc ttgcacaagatgagggaggtgatcatggagagcccgctggagatcactgagttatga

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