Chaetura pelagica (chimney swift): 104386394
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Entry
104386394 CDS
T08631
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03430
Mismatch repair
cpea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104386394 (MLH1)
03460 Fanconi anemia pathway
104386394 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104386394 (MLH1)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104386394 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104386394
NCBI-ProteinID:
XP_009993299
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MRAGGAGASSCLDAKSTSIQVVVKEGGLKLIQVQDNGCGIRKEDLDIVCERFTTSKLQKF
EDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAYRATYSDGKIKAAPKPCAGNQGT
QITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRYAIHNSGISFSVKKQGDTVSDVRTLS
NASTVDNIRSIFGNAVSRELIEVGCEDAGLAFKMKGYITNANYSVKKCAFLLFINHRLVE
STALRKAIETVYAAYLPKSTHPFLYLSLEIAPQNVDVNVHPTKHEVHFLHEDSILECVQQ
HVESKLLGSNSSRMYFTQTLLPGADCSSSEVVKSAANSSAVTKGTSDKVYAHQMVRTDSR
EQKLDAFLQPVNNPLSTGPTEATTETNAGPPESVVRPQESEMEDVSDLVEMADVEEDTVV
PVEMSESGRLSPETVPPRKRPREDMDVEMEKDDTRKVMTAACTPKRRIINLTSVLTLQEE
ISNQAHANLQEMLHDHSFVGCVSPQWALAQYQTKLYLLNTTRLSQELFYQILIYDFANFG
VLRLSEPAPLYELSMLALEDPESGWTEEDGPKEELAEYIVEFLTKKTEMLKDYFSLEIDK
EGNLTGLPLLIDNYVPPLEGLPMFILRLATEVNWDEEKECFESLSKELAMFYSIRKQYIV
DEANLTISQNEDSDSGSPTWKWTVEHVLYKAFRTHLLPPKHFTEDGNILQLANLPDLYKV
FERC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgggaggtgcgggagcgtcaagttgtttggatgctaaatccacgagtatccag
gtggttgttaaagaaggtggtctgaagcttatccaggtccaggataacggctgcggtatc
agaaaagaagatctggacattgtatgtgagaggtttactaccagtaaactgcaaaaattt
gaagacttggctagtatttctacctatggcttcaggggtgaggcattggctagcatcagt
catgttgcccatgtcacagtaacaactaaaacagctgatgcaaagtgtgcatacagagct
acttacagtgatggaaaaattaaagctgctccaaaaccctgtgctggcaaccaaggaact
cagatcacggttgaagatcttttttacaatgtaaatacaaggaggaaagctttaaaaaat
cccaatgaagaatatgcaaaaatacttgaagttgttagcaggtatgccatccataactca
ggcatcagcttttcagttaaaaagcaaggtgatactgtgtcagatgttaggaccttatca
aatgcttcaacagtggataacattaggtcaatctttggaaatgctgttagcagggaactg
atagaagtgggttgtgaagatgcaggtctggcctttaaaatgaaaggctacattacaaat
gcaaactactccgtgaagaaatgtgcatttttactcttcataaaccatcgattggtagag
tcgactgctttgcggaaagccatagaaactgtgtatgctgcttatctgccaaaaagcaca
catcctttcctatacctaagcctggaaatagccccccaaaatgtagatgtgaatgtgcac
cctacaaaacacgaggtccatttccttcatgaagacagtattcttgaatgtgtgcaacag
catgtagagagcaagttattgggctccaattcttcaaggatgtactttactcagacattg
cttccgggggccgattgttcttccagcgaggttgtaaaatcagcagcaaactcttctgcg
gttaccaaaggaaccagcgataaagtttatgcacatcagatggtccgcactgattcccga
gagcagaaattggatgcttttcttcagccagtgaacaaccccctaagtacaggccccact
gaagccacaacagagactaatgcaggacctccagagagtgtggtcaggccacaggagtct
gaaatggaagatgtcagtgatcttgtggaaatggctgatgttgaggaggacacagtggta
cctgtggagatgagtgaaagtggacgcttgtctcctgagacagtgcctcctcgaaagaga
ccacgggaagacatggatgtagaaatggaaaaagatgacacgagaaaggtcatgactgct
gcctgcacccctaaaagaagaattatcaacttgaccagtgtattgactctccaagaagaa
atcagcaaccaggcacatgcaaatcttcaggagatgctacatgatcactcatttgttggc
tgcgtcagtcctcagtgggctctggcccagtatcagacaaaactgtatcttctcaataca
acaagactcagccaagaactcttctaccagatacttatttacgactttgcaaactttgga
gtcttaaggttgtctgagccagctcctttatatgagctttcaatgcttgctttagaggat
cctgaaagtggctggacagaagaagatggcccaaaagaagagcttgctgaatacattgtg
gagtttctcacaaagaagactgaaatgctgaaagattatttttctcttgaaattgataag
gaaggaaaccttactgggttaccacttctgatagacaactacgttccgccactggaagga
ctgcctatgtttatccttcgcttggccacagaggtaaactgggatgaagaaaaggaatgt
tttgaaagcctaagtaaagaattagccatgttctactccattagaaagcaatacatagta
gatgaagccaaccttactatttctcagaatgaagattctgattctggttcacctacatgg
aaatggactgtggaacacgtactttacaaagcttttaggactcatcttttacctcctaag
cactttacagaagatggcaacattttgcagcttgcgaacctgcctgacctgtataaagtt
tttgagagatgttga
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