Chaetura pelagica (chimney swift): 104386443
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Entry
104386443 CDS
T08631
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104386443 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104386443 (SMG5)
03032 DNA replication proteins [BR:
cpea03032
]
104386443 (SMG5)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104386443 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
104386443 (SMG5)
DNA replication proteins [BR:
cpea03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104386443 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
104386443
NCBI-ProteinID:
XP_009993353
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MTSLALLSVLPCRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKLRELCVKLMFLHPV
DYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSH
YQLELQGCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVD
TELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAFGNL
KRLYDKAAKMYHQLKKCETRRLSPSKKRGKDIKRLLVSFMYLQSLLQPKSSSLDSELTSL
CQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMVIICLMSVHSLKRA
GSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDDQEPREPLNSIEK
EAEADLANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSMK
GSDGSESGSEKSDEEGEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSGRGKSGPKEAL
KNCVDGSGLGDSKSLSISKMEAPDPAVNGPVSLSTNDASIASNLQAMSTQLFQTKRCFRL
APTFSNILLKPNSEPSALKDGLESKPCVNGDLEKPSLAEQDDVSDSEESISSNKSCRNER
SLQEKLEIMTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQ
ESGLALCNEVKDILNDAELPDLKANLLLPEDVALRNLPPLKNAHKRFNFEQDRPIFSAVE
EAVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQAEQDNLLHQAQAQFHMAAEEAR
RNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQLATSGRF
IIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDL
DAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSTFSVPMQSALQAAASASI
EIKNVLEFYKQWKEMG
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccttgctcttctttctgtgttgccctgcagagcagtggtggaggctgttcat
cggctggatctcatccttgggaacaaggcagcctatcaagaagtgttcaagcctgagaac
atcagcttgaggaacaagctgcgggagctctgtgtgaagctgatgttcttgcacccagtg
gactatggaagaaaagcagaagagttgctctggaggaaagtttactatgaagttatccag
ctcattaaaaccaataaaaagcacatccacagtcggagcaccctggagtgcgcataccgg
acccacctggttgctgggatagggttctaccagcacctgctcctctacatccagtcccac
taccagctggagctgcagggctgcattgactggacacatgtcaccgacccactcatcggc
tgcaagaaacctgtgtctgcatcagagaaggagatggagtgggcccagatggcatgtcac
agatgtctggtgtatctgggagatttagctcggtaccagaacgaactggccggggtggac
acggagctgctggccgagcgcttctactatcaagccctttctgttgccccacagattggc
atgcccttcaaccagctggggacactggcagggagcaaatactacaacgtggaggccacc
tactgctacctgcgctgcatccagtctgaagtgtcctttgaaggtgccttcgggaacctg
aagcggttgtatgacaaggcagccaaaatgtatcaccagctgaagaagtgtgagaccagg
aggttgtctccaagcaagaaaagaggcaaagacattaagaggttgctggtgagctttatg
tacctgcagagtcttttgcagccaaagagcagctctctggattctgagctgacatccctc
tgccagtcagttctggaggacttcaacctgtgcttgttctacctgccctctcctcctaac
ctgagctcaacgagtgaagatgaagaggagtatgagagtggctactccttccttcctgat
cttctcatcttccgcatggtgatcatctgccttatgagtgtccacagcctcaagagggca
ggttccaagcagtacagcgcagccatcgccttcaccctggccctcttctcccacctcatc
aaccacgtcaacattcgcctgcaggcagagctagaagagggagaaaatccagttccagcc
tttcagagtgatggcacagatgaccaggagccaagggagccactgaactcgattgagaag
gaagctgaagctgacttggccaatcatcagcccagtgaggagcagcggaagaatgactgc
aagaagagcaagaaatactctcgtctctcctgtttgcggcgccgccgccacccccagaag
gtggatgagagtgacctgagcgagggctttgactctgactccagccagggctccatgaag
ggcagtgatggctcagagagtggctctgagaagagtgacgaggaaggagaagctgctttt
gacgtggagacggactctgacatgaacagccaggaatctcgctccgacttggaggacatg
gaggatgagccgggcgaggagggaagcggccgaggcaaaagtgggcccaaagaggcctta
aaaaactgtgtggatggcagtgggctgggggactccaaaagcctgagcatctctaaaatg
gaggctccagatccagcagtgaatgggcccgtttccctgagcaccaatgacgccagcata
gccagtaacctccaggccatgtccacccagctgttccagaccaagcgctgctttcgcttg
gctcccactttcagcaacatccttctgaaaccaaacagtgaaccctctgccttgaaggat
ggactagaaagcaagccatgtgtaaatggagatctggagaagcccagcttggcagagcaa
gatgatgtgtcagactctgaggaaagcatttcaagcaacaaatcctgcaggaatgagcga
tcccttcaggagaagctggagatcatgaccaacgaagggctgcttctcactgtcaaggtc
ttcctggactggctgaggacaaacacagacctcatcatcatgtgtgctcagagctctcag
agcctgtggaacaggctgtctgtgctcctgaaccttctgccttctgctgcagacctgcag
gaatcagggctggccctgtgtaatgaggtcaaggacatcctgaatgatgctgagctccca
gacctgaaagccaacttgctgctcccagaagacgtggccctacgaaatcttccccctctg
aaaaatgcccacaagaggtttaactttgagcaggacaggcccattttctcagcagttgag
gaggccgtggttcggatctgctgcattcggagctttgggcacttcatcacccacctgcaa
ggcagcatcctgcagttcaactcagagcttgggatcttcatcagcatcgctcaggcagag
caggacaacttgctgcaccaggcccaggcccagtttcacatggctgcagaggaggctcgt
cggaacaggctgatgagggacatggctcagcttcgactgcagctggaggtctctcagctg
gagggaagtctccagcagcccaaagcacagtcagccatgtctccttaccttgtcccagac
acccaggccctctgccagcacctggctgtggtcaagcagttggccaccagtgggaggttc
atcatcatcatccctcgaacagtgatcgatgggttagacttcctgaagaaggagaacgca
ggtgcccgggacagcatccggtatctggaggcagaatttaaaaagggaaacaggtacatc
cgttgccagaaggatgttgggaagagctttgagaggcataaattgaagagacaagattta
gatgcctggaacctctataaaatactggacagctgcaaacaactgacagtgtcccagggg
agtggagaggatgacaccacaggcatggtcaccatcatcactggcttccagctggaggac
ccaagcacgttctcagtgcccatgcagtctgccctgcaggcagctgccagtgccagcata
gaaataaaaaacgttctggagttctacaagcagtggaaggagatgggctga
DBGET
integrated database retrieval system
