Chaetura pelagica (chimney swift): 104386549
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Entry
104386549 CDS
T08631
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04514
Cell adhesion molecules
cpea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104386549 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104386549 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpea00535
]
104386549 (SDC3)
Proteoglycans [BR:
cpea00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
104386549 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
104386549
NCBI-ProteinID:
XP_009993468
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MSEISVAAQGFGDKKPTSWLLEAQRWRNENYERPVDLEGSGDDDPFGDDELDDVYSGSGS
GYFEQESGLETAGSLTTDTSVTLPTTAATLPVTPVQPVATPLGPFPAEDTTPGQTTSTLY
IPRVTEAPVIPTWKATTTTTTASDSPTTTTTTTTTTTTATTTAATTTTSTTVVTAKPTTT
RRFLPPFVTKAATTRATTLETPTTSIPDTSTPTEVATSPLVPTSTAKPRTLPKPTTSRTA
DLTEKSPALPATLPPTEAPQMEPGEVTTGLDNELEIPVSSGPSGDFEIREEEETTRPELG
NEVMVVATPPPRPGLGREAKTGLIDNTIDSGNSAAQLPQKNILERKEVLIAVIVGGVVGA
LFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatttctgtagcagcacagggttttggggacaaaaaacccacctcgtggctc
ctggaggctcagcgctggcgcaacgagaactatgagaggcccgtggacctggagggctct
ggggatgatgacccttttggggatgatgaactggacgacgtctactcgggctctggctcg
gggtatttcgagcaggagtcagggctggagacagcagggagcctcaccacggacacgtct
gtcacgctccccaccacggcagccacgctgcccgtcacccccgtgcagcccgtggcaacc
cccttgggaccattccctgctgaggacaccacccctgggcagacaaccagcaccttgtat
atccccagggtgacagaggcaccagtgatccccacttggaaagcaaccaccaccaccacc
actgccagtgactcccctactaccacgaccacgaccaccaccaccaccaccacggccacc
accactgcagccaccactaccaccagcaccaccgtggtcactgccaagcccacaaccacc
cggaggttcctgcccccttttgtcaccaaggcagccacgacccgggccaccaccttggag
acacctaccacctccatccctgacaccagcacacccacggaggtggccacctcacccctt
gtccccaccagcacggccaagccccggaccctgccaaaaccaaccacctccaggactgca
gacctcacagaaaaaagccctgctttgccagccactctgccgcccacagaagccccccag
atggagcctggggaggtgacgacaggccttgacaacgagctggagatcccggtcagcagc
ggccccagcggggactttgagatccgggaggaggaagagacgactcgtcccgagctgggg
aacgaggtgatggttgtggcgacgccgccgccgcggcccgggctgggcagggaggccaag
acggggctgatcgacaacacgatagactcggggaactcggctgctcagctcccccagaag
aacattctggagaggaaagaagtgttgatagcggtgatcgtgggcggcgtggtgggagcc
ctgtttgctgccttcctggtcatgctgctcatctacaggatgaagaagaaggacgagggc
agttacacgctggaggagcccaagcaagccaacgtgacctaccagaagcccgacaagcag
gaggaattttacgcgtag
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