Chaetura pelagica (chimney swift): 104386600
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Entry
104386600 CDS
T08631
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104386600 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104386600 (DCP1B)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104386600 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
104386600 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
104386600
NCBI-ProteinID:
XP_009993526
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MQGFKYWLPPGNNRNKEKTDVEGTLFVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQ
LQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQQEQFKAQQGTATGLSPMIMNSA
NNKEVDILRMLTKAKDEYTKCKTCSEPKQITSSSAIYSNPNLIKPIPVKPSENQHQRIPQ
QSKNVDPEPQHLSLTALFGKQEKPDVSEPLAKQHQENLPVRQGVVRSLSYEEPSRLSPSA
EKQLCPAIQKLMVRGTDLHPLAEFPENRLCENGNIHPVGETFTGLFQPVTSHGIATSHVV
QETAGTQSLLQKLQGQSGSVTKMEPSATGSVNSAAXXXXRTPAAVGAEAAPVNTMSQPPL
VYFNGSLPGQTLESQTLGKEQSKLPRQPLSLTSNQTANSGVISPQELLKKLQIVQQEQLH
VSSRPTLAAKFPVVTQNTNTLKPLDSWIEKAPSTEKQSSLFQVISPQHIPATVTPTLLMS
PMVFTQSTPAPPKANESGRLTTANQEPAASSASLLLPMQTPEPSVVNSNSVTKMQLQETL
LHLIQNDDNFLNIIYEAYLISVRKAAMRKSM
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcttcaagtattggttaccacctggcaacaacagaaacaaggagaagaccgat
gtggagggaacactgtttgtttacacaagatcggcttctccaaggcatggattcacaatt
atgaacagactaagcatggaaaatcgaacagaacctattactaaagaccttgatttccag
ctgcaggacccttttttactgtacagaaatgccagattgtccatatatgggatttggttt
tatgataaggaagaatgccaaagaattgcagagctcatgaaaaacctaactcagcaggag
caattcaaagcacagcagggcacagcaacaggactgtccccaatgatcatgaattctgca
aataacaaagaggtggatatcctacggatgcttaccaaggccaaagatgagtataccaag
tgtaagacctgctcagagccaaaacaaataaccagttcctctgcaatctatagcaacccc
aacctaatcaaaccaattccagtgaagcctagtgaaaatcagcatcaacgaatacctcag
caaagcaagaatgtggatcctgaaccacagcacttgtctttgacagcactgtttggaaaa
caagaaaagccagatgtctcagagccacttgctaaacagcatcaagagaatcttcctgtt
aggcagggtgtggtacgttcactgtcctacgaagaacctagcaggctttctccctctgca
gagaagcagctttgccctgccattcagaagcttatggtacgtgggacggaccttcatcca
cttgctgagtttcctgagaaccggctctgtgaaaatggcaatatccaccctgtgggtgag
actttcacaggactcttccagcctgtgacttctcatggtattgcaacatctcatgtagtt
caggagactgctggcactcagagcttattacagaaattacagggtcagtcagggtcagtg
actaaaatggagcccagtgcaacaggatctgtgaactcggcagcnnnnnnnnnnnnnagg
actcctgctgctgttggagcagaagcagcaccagtaaacacaatgagccagccacctttg
gtatatttcaatggttccctaccaggccagactttagagtctcagacacttggtaaagaa
caatccaaacttcctagacagccactttctcttactagcaatcaaacagccaattctgga
gtgatctcacctcaagagttactgaaaaaactccaaatagtgcaacaagaacagttgcat
gtgtccagcagaccaactttggcagctaagtttccagttgtcactcagaataccaataca
ctgaaaccactggattcctggatagaaaaagcaccgagtacagaaaaacagagctctctc
tttcaggtaatctcaccccaacacattcctgccactgtgactcctaccttgttgatgtcc
cccatggtgttcactcagtccacacctgctccaccaaaagcaaatgaaagtgggaggcta
acaacagcaaaccaagaacctgctgctagctcagccagccttctcctgcccatgcaaacc
ccagagccatctgtggtcaacagcaactcagtgacaaagatgcagctgcaggaaacgctt
ttacacctgatccagaatgatgacaacttcttaaatattatttatgaagcatatctcatc
agtgtgagaaaggcagcaatgagaaagtccatgtga
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