Chaetura pelagica (chimney swift): 104386658
Help
Entry
104386658 CDS
T08631
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104386658 (DENND4A)
Membrane trafficking [BR:
cpea04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104386658 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
104386658
NCBI-ProteinID:
XP_009993589
LinkDB
All DBs
Position
Unknown
AA seq
1872 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVINKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRARDKPPLTDLGVLYDGKERVKQGCEIIH
TTPYGRPANISGSASSQRVYVTYRRASDNMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLSEKQKSQLGLAAAAESK
SDSCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLSNLYQQLAEMQQRPREDALM
ELAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFE
LQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFERPEGFLTAPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYV
KVCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAG
IDPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKLPANTSHTAV
PGGLSDLGNNTSFKEESKQGKTCLQDIQEQKEDKRESDSSSLSEVESTKGSGDCLSKLNY
QNSSDAKAASSIVRLNGTVDNTVAEADTVSLESSVGLLFTSPFEDASEAEVIESKSLRKR
HKSTIEPDLREVPWESRSRNLSGDGLVGLMINSINQESNPGEIVEKLGADARILSSALQK
SIRPKTLNIRTSSLGSKRESLEKESSDEDAAFDGSFTDKTESPVIFDLEDLDAEPETPTA
VKPSCEKSRRLQRKSSFPVKTVEKTDVETGFDPLSLLVAETEQQKEDEEDEDDRSVSTPS
ARRDLAEEIVMYMNNMSSPLSSRAPSIELQKPCDDRNANKKSPTVIQPCRRSSLPPNSPR
PSNLTKSKSYHARHEERPRDRLWSSPAYSPNSPAKEQPADATGALTLVSSPSFNLDTLLT
PKFDVLKSSMFSAGKGVAEKASKWYSKFTMYAASSKDQNSDRASVSSLGALDSESTSLTD
EDVCNDFESASPQENNTSEIKRIGLSRTSLESSASHDGSLSKFPLPDKSELVSSCSTSST
SVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLSIEI
RDLRRPGRYFLKSSPSTENMQLPSLFANQSGKPCNTAAPVGLATSLMSVQEDINSKSKSK
QHDNICARSIQIPSGRRQNTSGSDCTSHPVARSISTFGPLEEDEEENQKMSHIIPTGSLP
ATLQGPTDSLGLEWHLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFVDHHPIV
FWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWDNMKLHQDP
RQPLYILWNAQTQKYPMVHLLQKDDDSFNQELLRSMVKSIKMNDVYGPMSQILERLNKWP
HIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTANQVKNTHNCDRPPSTGV
MECRKIFGEPYL
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggctcgtgttgctgactactttgttgtcgcaggattaacagatatt
tcaaaaccactagaggaagaaatccacttcaatgatgcttgccataaaattgctaaacca
aaagaacctattacagatgtaacagtaattaataaatctctgggggaggaagttcctcag
ggatataaatgcatagatgttactccttcaggactgtctgcagatctcaataatggcagt
ctggtgggaccgcagatatacctttgttatcgccgagcaagggataagcccccacttact
gatctgggggttttgtatgatgggaaagaaagagtaaagcagggttgtgaaataattcac
actactccctatggtcggcctgccaacatcagcggcagcgcctcctcgcagagagtgtac
gtcacttaccggcgggcgtccgacaacatgacacagaacaccttggctgttactgatata
tgtatcatcataccaagtaaaggagaaacccccccacataccttctgcaaggttgacaag
aatcttaataatagcatgtggggctcagcagtatatttatgttataaaaagtccgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagataccctgaagaagattat
gagtcattcccactaccagaatctgtgcctcttttttgtctacctatgggtgcaacgatt
gaatgttggccatctaacagtaaataccctctcccagttttttccacatttgtactgact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaactgtatcctgaa
gagaatctctcagagaaacaaaaatctcagctgggattagcagctgcagctgagagcaag
tcagattcatgtagaacagttcaaacaaataaatgcatctgtctgctctctcactggcct
ttttttgatgctttcaagaagtttcttacctttctgtatcgttactccatttctggtcca
catgtcctacccattgagaaacacatttcccatttcatgcataaagttccttttccatcc
cctcagaggccaagaattctagttcagctatctccacatgataacctgattcttagccaa
cctgtgtcatcacctcttccactgagtgggggcaagttttctacactacttcagaattta
ggacctgaaaatgctgtaactctacttgtgtttgcagtgaccgaacacaaaattctcatc
cattcattgcgaccttctgtccttactagtgtgacagaggcattagtctctatgatattt
cccttccactggccttgcccatatattcctctctgtcccttggcactggcagatgtgtta
agtgcaccatgcccattcatagtgggaattgattcaagatactttgatctctatgaccct
ccaccagatgttagctgtgtggacttggataccaatacaatttctcaaactggagataag
aaagctattgcatggaagatcttaccaaagaaaccttgtaaaaatttgatgaacacttta
agtaatttatatcagcaactggcagaaatgcaacagagaccaagagaagatgcgttaatg
gaattagcaatgaatgactatgattttaattctgggaagaaattacatttgttagatttg
gagatccaggaagcatttctgtgtttcatggcctcaatactaaaaggttacaggtcttac
ctcaggccaataacagaggcaccttctgaaacagccacagatgcaagttccctctttgaa
ctacaaggcttcctcaaaagtcgagatcgttcccatcagaagttctacaccctgatgacc
aaaactcagatgttcatccgcttcattgaagagtgttcctttgtcagcgataaggacgca
agccttgcgttttttgatgactgcgtggacaaagtagacatggacaaaactggggaaaca
cgacttatagagctggatgagtcatacaagagtgagcacacggtgttcataacaccaccc
gagatccctcacctgccaaatggtgaagaacaccctctgcagtacagctataatgggttt
ccagtgctaaaactagatttgtttgagcgaccggaaggatttctcacagcaccaaataac
aagctgtcctcaaaagccagcagtcccaacagcccatcaccaatgttcagaaggactaaa
caggaaattaaatctgcacataaaattgcaaagaagtactcatccataccccagatgtgg
tccagatgtttgttacgtcactgctatggtctttggtttatctgccttcctgcatatgtc
aaagtgtgccactccaaagtcagggctctgagaacagcctatgatgtgctacaaaaaatg
cataccaaaaaaatagatccacctgatgaggtgtgctaccgagtgctcatgcaactgtgt
gggcagtatggtcagcccgtgctagcagtgagagtgctgtttgaaatgcagaaagctggt
attgaccctaatgccattacttatggctactacaataaggcggtgttggagagcacctgg
ccttccagcaatcgaggtggctatttcctatggatgaaaatccggaacgttgttttagga
atagcacagtttaaaaaggcattgaaaaagctaccagcaaacacctcacatacagctgtt
cctgggggactttcagacttgggcaataacacatcattcaaagaagaatccaagcaaggt
aaaacttgtcttcaagatatacaagaacaaaaagaggacaagagagagagtgactccagt
tctctgtctgaagtggagagcacaaaagggagtggtgactgcctctctaagctgaattac
cagaactcaagtgatgccaaagctgcttccagcatcgtgcggctcaacggtaccgttgac
aacacagtagcagaagcagacacagtgagtttagagagttctgtaggattgctgtttaca
tcaccttttgaggatgccagtgaagcagaagttatagaaagcaaatccttaagaaagaga
cataaaagcaccattgaacctgacctgagggaagtgccatgggaaagcaggagccgtaac
ctgagtggagatgggttagtgggactcatgataaatagcatcaatcaggaatcaaaccct
ggagaaattgttgaaaaactaggagctgatgccagaatcctatctagtgcattacagaaa
agcataaggccaaaaactcttaatataagaacttcctctttgggatctaagagagagagc
ctggagaaagaatctagtgatgaagatgcagcttttgatggcagttttacagataaaaca
gagtctcctgttatctttgatctggaagatttggatgcagaaccagaaacacctacagca
gtgaaaccctcctgtgaaaaatctagaaggttgcaaagaaagagcagctttccagtaaag
acagttgaaaagactgatgttgaaactgggtttgatccactgtctctgctggttgctgag
acagaacaacagaaagaggatgaagaggatgaggatgacagaagtgtttctacaccatct
gcaagacgagatttagctgaggaaatagtcatgtacatgaacaacatgagcagccctttg
tcaagtcgtgccccaagcattgagttgcaaaaaccctgtgatgacagaaatgctaataaa
aagagcccaacagtaatccagccttgtaggaggtccagccttccccccaactccccaagg
ccatccaatcttaccaaatccaagagttatcatgcaaggcatgaagaaaggccaagagac
agactttggtcctccccagcttattctccaaacagtccagcaaaggagcagccagcagat
gctactggtgcattaacactggtgtcttcaccgtcgttcaacctggatactctgttaaca
cccaagtttgatgttctaaaaagcagcatgttttctgctggaaaaggggttgcagagaaa
gctagcaagtggtactcaaaatttactatgtatgctgcatcctctaaggatcaaaattca
gatcgagcaagtgtttcatctcttggagctctggactcagaatctacttctctaactgac
gaagatgtctgcaatgattttgaaagtgcatctcctcaggagaataacacatcagaaatc
aagagaattggcctcagcaggacaagcctagaaagctcagcttcccatgatggttctctt
tccaagttccctttaccggacaaatcagagttggtgtcttcttgcagtacaagcagtacc
agtgtgtttcagaactatgctatggaggtcctcatctcaagctgttcaagatgtcgaact
tgtgactgtttggttcacgacgaagaaatcatggcaggttggacagcagatgattcaaat
ctcaacaccacgtgtcccttctgtggcaacttatttctgccttttttaagcatagaaatc
agagatctgcggcgacctggacgttattttctgaagtctagcccttctacagaaaacatg
cagctcccatcactttttgcaaatcagagtggaaagccctgtaacactgcagctcctgtt
ggccttgctacatcactgatgtctgtgcaagaggatataaattcaaagagcaaatctaag
cagcatgacaatatctgtgccagaagcatccagattccctcaggaagaagacaaaacacc
tctgggtcagattgtacaagtcaccctgtagcaaggagtatcagtacttttggtccattg
gaagaggatgaggaggaaaaccagaagatgagccatatcattcctactggtagcctgcct
gctactttgcaaggaccaacagattccttgggcctagaatggcacttgcctagtcctgat
cctataacggttccttatctcagtcctctagtggtatggaaagagcttgagagcttactt
gaaaatgaaggggatcatgcaataacagtggcagactttgtagatcatcatcctattgtg
ttctggaacttggtgtggtacttcaggcgcttggacttgcccagcaacttaccaggatta
atactttcttctgaacactgtaataaaaactccaagattccacggaactgtatgtcagag
gacagtaaatacgtgcttattcagatgctgtgggacaatatgaaattgcatcaggatcca
aggcagcctctctatatcttgtggaatgctcagacccagaagtatccaatggtccattta
ttgcaaaaagatgatgactcttttaatcaggagctcttgagaagtatggtaaaaagcatt
aagatgaatgatgtgtatggaccaatgagtcagatattggagagactgaacaaatggcca
cacattaaaaggcagaggagcctttacagagaaatactctttctttcacttgttgctcta
ggaagagataacattgatatagatgcttttgaccgagagtacaaaatggcctatgatcgt
ctgacagctaatcaggtgaagaacactcataattgtgatagaccaccaagtactggagtg
atggaatgcagaaagatttttggagaaccttacctttaa
DBGET
integrated database retrieval system
