Chaetura pelagica (chimney swift): 104386750
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Entry
104386750 CDS
T08631
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104386750 (SOX6)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104386750 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104386750
NCBI-ProteinID:
XP_009993700
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MPSNSEVLAGVVGESRTEEWKNSHYIRMSSKQATSPFACPADGEETMTQDLASRHKEEGN
NDQHATSHLPLHNVMHNKPHSEELPSLVTTIQQDPEWDGVISAQHRMESESNKLCSLYSF
RNTSTSPNKPDEGGRDRSELMSSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSS
CMEKLLSKDWKEKMEKLNTSDLLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPI
FPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAA
QLASMQVSPGTKMPSTPQPPNTTGALSPTGIKNEKRGTSPVTQVKDEAAQPLNLSARPKT
AEPVKSPTSPTQNLFPASKSSPVTVTNKSGIPSPLGGSLGRGSSLDILSSLNSPALFGDQ
DTVMKAIQEARKMREQIQREQQQQQQPHGVDGKLPSMNNMGLNNCRNEKERTRFENLGPQ
LTGKPNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDSR
GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE
EQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQ
IPITTGTGVVYPGAISMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSGSLAGN
EMINGEDEIEMYEDYEDDPKSDYSSENEAHEAVSAN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaactctgaagtgctggctggtgtggtaggagaaagcaggacagaagagtgg
aagaacagccattatataagaatgtcttccaagcaggctacctctccatttgcatgtcca
gctgatggagaggaaacaatgacccaggacttagcatcacgacacaaggaagagggcaac
aatgatcagcatgcgacctctcatctgcctctacataatgtaatgcacaacaaacctcac
tctgaggagctaccaagtctggtcacgaccatccaacaagaccctgagtgggatggagtc
atctcagcccaacacagaatggagtcagagagtaataaattatgttccttgtattccttc
cgaaatacctctacctcaccaaacaagcccgacgaaggaggtcgtgaccgcagtgagcta
atgagcagtgttaattttggaacaccagaacgccgcaaaggaagccttgcagatgtggta
gacacactgaagcaaaagaagttagaagaaatgaccaggactgagcaagaggattcatcc
tgcatggaaaagctactttctaaagactggaaggagaagatggaaaaattaaacacaagc
gatctccttggagaaattaaaggtacaccagaaagcctggcagaaaaagagcgacagctc
tctactatgatcacccagctgatcagtttacgggagcagctcctggctgcccatgatgaa
cagaaaaagctggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgc
caacagcaagaacagattgcaagacaacaacagcaacttctgcaacagcagcacaaaatc
aatctactgcagcagcaaattcaggttcagggtcacatgcctccgctcatgatcccaatt
tttccacacgaccagcggacgctggcagcggctgctgcagcccagcagggattcctcttc
cccccaggaataacttacaagccaggtgataactaccctgtgcagttcattccatcaaca
atggcagctgctgctgcttctggactcagccctttacagctccagcaactgtatgcagct
cagctggcaagcatgcaagtttctcctggaaccaaaatgccatctactccacagccacca
aatacgacaggggcactctcacccactgggataaaaaatgagaagagagggaccagcccg
gtaactcaagtgaaggatgaagcagcccagccactgaatctgtcagcccgacccaaaaca
gctgaacctgtgaaatccccaacatctccaacacagaacctcttcccagctagtaaaagc
agtccagtgacagtgacaaacaagagtggcatccccagccccctcggtggatctctggga
agaggatcctctttagatattctttccagtcttaattcacctgccctatttggggaccag
gacacagtaatgaaagccattcaggaggctcgaaaaatgagagagcagatccaaagggag
cagcagcagcagcagcagccgcatggtgttgatggaaaattgccctccatgaataacatg
ggtctaaacaactgcaggaatgaaaaggaaagaacaaggtttgaaaatttaggcccacag
ttaacagggaaacccaatgaagatggaaaactgggccctggtgtcatcgatcttacaagg
ccagaggatgcagaaggaagtaaagcaatgaatggctctgcagctaaactacagcagtat
tattgttggccaacaggaggtgccactgtggctgaagctcgagtctaccgggattcgcgg
ggccgagccagcagcgaaccacacatcaaacgaccaatgaatgctttcatggtttgggca
aaggatgagcgtcgaaaaattctccaagccttccctgatatgcacaactccaacattagc
aaaatcctaggatctcgctggaagtccatgtcaaatcaggagaaacaaccttattatgaa
gagcaggcacggctaagtaaaatccacctagaaaagtatcctaattacaaatacaaacct
cgaccaaaacgtacctgcattgttgatggaaagaaactgcgtattggtgaatacaaacaa
ctgatgaggtctcgaagacaggagatgaggcagttttttaccgtaggacaacagcctcaa
attccaatcaccacaggaacgggggttgtctatcctggtgctataagcatggcaactacc
acaccttcacctcagatgacatcagattgctcaagcacctctgccagccctgagcccagc
atccccgtcattcagagcacttatggtatgaagacggacagcggaagccttgctggaaat
gaaatgataaatggagaggatgaaatagaaatgtatgaggactatgaggatgatcccaaa
tcagactatagtagtgaaaacgaagcccatgaggcagtcagtgccaactga
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