Chaetura pelagica (chimney swift): 104386954 Help Entry 104386954         CDS       T08631                                  Symbol RTTN Name (RefSeq) LOW QUALITY PROTEIN: rotatin   KO K16484   rotatin Organism cpea  Chaetura pelagica (chimney swift) Brite KEGG Orthology (KO) [BR:cpea00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cpea03037]     104386954 (RTTN) Cilium and associated proteins [BR:cpea03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    104386954 (RTTN) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N DUF445 DUF383 Motif Other DBs NCBI-GeneID:  104386954 NCBI-ProteinID:  XP_009993938 LinkDB All DBs Position Unknown AA seq 2502 aa AA seqDB search MHMVEETPILINANGEEKVKLDSKPVMGICKLIGTIPPFCRGNPPGSGSASRPPGHGWAV GAGLHGSCSYSCSSGAPRVAVGRGVKAPSVLRAQPRAVGAASGSGADYISQGDGSCPLLG HRGRLLRGAAAVPTPLRGFVQGGGEGPAPRPPAVPRGFTCETGPSAACGSAAAGREGRRE RAAASFLGTRGAREHLPDPRFQVPAPDPAPVCRLLLSPSRCRHLGICGSCCPWEMLKAFP FRYSAFGFNRLGWIFVQVVSLRRLSVSTAYCGHELAEIRERSLKTIIFKLDHNLISYADL IHEKVLFFNLLEWFNFPVVPMKEEVLNLVNNLIKHPPAAQKLIGIGAVEFFSQLRPNVDP NLQAVIDGIVDGLFFLPSGLPSSSSSVCYQTLSQPSVDQPVLPQEEFLTGYFCQGERSLP QLEIPPKRTVGMCMKCLKFSTFPWLTLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDV IMQDFPAEIFLQRPKIVQSLLSLLNLAFGGDGGHRLALQAVSCLQQLCIFLRSRLNFHRD PSFSSTVQGTASQNSSMSYCQEARGPPCSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDA ASSSGNSTQPNANSRISLHSPLAVGHIDLPDTENEDTLELQMRQLSLPQFCVSILENAIP LLRTGNRRVTMEVLDLLVEDMFLIGDAISENVWEDDSLFALQLKDKLLMILDFLGEAILY HKTNISAEQPEVMLVHHRMAFVSISLFTVRLLQILLPVEKASKVLQKSLLNALFLLSLDV SFSLEYPSIHESIVAYLEQMSTENYNIYKQTSEAAYSIECTCSFMSEVHKKGDKNLSELV ELAGQALSSLPYHQHFPLLQECIHICSNIWKSAEANSLLQAEGQKVLLHLLSHPMLNIKT EAYHCCLEVVKDCLGIHNVVKPVSSICQGIHFLLHPKVLYEICTFGLPEAKNEVNSTAKA ILIHLLQGRLVMAVLTWNKFIEALCPIIPVLQGYADTKDTLGNCILTLSETASDKGDGIL PRTTRLRAALRLLFSKKQLVRSMALKHLTFHLLNEEGANLKRPHIHASVLSSISNLFIIE RAIELKLDDKTESIIKAETVEKLYDILTSDAVDLVLQKSAAEQLAIILEDTKMHGIVKKL GVIERILTYLNECVHVDGKLMESIVLPCLTLLRKLVYADPIVRLSLAQQSSLLLLLFRVA LIFQDNGDVLTEATVLLCLLLFDEVARTEMWYEKAVIXGDGITINDTGLPAFSLPVAVVR RYHLPVRITAHHVVSPNTVVVPLSSECLAMKPVSDMLKMAWNLSWYHGIKNLLQLINYEK EAETFLDSLKLSSEDIVILKITHTDYGLQDCLNSVIQGVSHRDVRAALIRLNFYILNDRL ALKCSSGSCVTTLKSFVWQKAINRFLQVLPASSEDEKLLVDILRFLNKLLKEQRSSLESD HIKWILKSFLKNEPKSLLALLVRPESQMQNEIDDIQTRVRQQLDKELIRLFNTLLLCSLS VTDREVLQLAGSFRTELALNLLQCLRLTDAPHFYGLPSLERTLRGMVHVTALPNWSTYSA AVEPVTICKKYLTGLLEVISSFYVEWGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAKDM DWISLWSLPYDTSEEQASRLGLAWLIPLWVDRDPEVRFTALGIGSALTSLEIGCIALAES CQNISGGLWATVINILLDQSECSVVRREAAFILQNLLVIPIPSEDVKDCFWHGPCVHDEE SGLCQTGKPALKTLLYHCQFYEHVNQMVKHCYLGCYMFDLNSSKEDSLIIEEGGITDFDD SLNLWRAPSSQSRSSHSQSTSETMIWYASPSLGSVTELQAIVAANSTSFIPENAADRLRA QGQSNTTTTESPSQRNSPMSATLSKQHAVVTPALLSAVCSLLHNLLVVTPRDTGIALQQA HLLTALSSLVSANLVERCILELKAPLGHPCHIEHVKDQVLLLLQYLSSVSRLLKSCLLVD SQLVIQDELLKPLLGNTFKILSISSKDELDTELTSVLHETWVDLFSLLSTLLWKGGQMCL SSVTAALANHCTAIIGTICDCIHLSDTYPALYIASLQFLSVILNEEGRRQLQDKDSICQN PTMSFLLDHVEGCQASVAQLTALIIQVCERKSAKDVLKEVTTNALLSLLAVSKNAQKCAL EVDLIGSCIEDMKHIHAQLNLDSLKPGKAQKKKEDNLIKQLRCSMQLLRNCLFQNEECKM AALKGHLVPVLHSLWPWFLTDDSSMQIALHLLCVYTANYSAGCASLCWASGGQSSLPSAR SAAGNSLMHNILKLASQVSNDNCPIQQVVFCLLSNLALSHDCKGIIQKSNFLQNFLSLSL PKGSHKNPGAVSTLWLKLLLNISFGEDGQQMIMKINGFLDQIVEMCKYKHKSSQHLALLI LHNVCFSPANKPKILANDKAIAVLSTCLESDSCAVQRIGAASLWALLHNYQKAKVTLKNP SIRRKIDEAYSLVKKTAPQPEENELHAYYLKCLESIVQLLDS NT seq 7509 nt NT seq  +upstreamnt  +downstreamnt atgcacatggtggaagagacacccattttaattaatgccaatggagaagaaaaagtcaaa ctggattcaaaaccagttatgggaatctgcaagctaataggaacaattcctcctttctgc cgaggaaacccgcctggctccggcagcgcttcccgcccgccaggacacggctgggccgtg ggcgcggggctgcatgggagttgtagttactcctgctccagcggcgcgccccgggttgcc gtggggaggggggtgaaagctcccagcgtgcttcgcgcgcagccaagggcggtcggggca gcgtcgggaagcggagcggactacatttcccaaggtgacggctcctgccccctcctgggg catcggggccggctgctgaggggcgccgcggctgtcccgacccctctgcggggctttgtg caggggggtggcgaggggcctgccccccgccctcctgcagtgccgaggggcttcacctgc gaaacgggcccgtcggctgcgtgtgggagcgctgctgctggccgggagggacggagggag cgggcagcggcttccttcctcggcactcggggggcgcgggagcacctgcctgatccccgc tttcaggtgcccgccccagaccccgcgccggtttgtcgccttctgctctctccttcccgc tgcagacatctaggcatctgtggatcctgctgtccctgggaaatgctgaaggctttccct ttcagatacagtgcctttggattcaacaggcttgggtggatttttgtccaggttgtgagt ctgaggcggctttcggtatccacagcttattgcggtcatgaactggcagagataagagaa cgatcactgaagactattatttttaaattagatcacaacttgatttcgtatgctgatctg atccatgaaaaagtgcttttctttaatcttttggagtggttcaattttccagttgtacca atgaaagaggaagtactaaatcttgtgaacaatttgattaagcatccacctgctgcccag aaactgattggaattggtgcagtggaattcttctctcagcttcgtcccaatgtagatcca aacttgcaggctgtaattgatgggatcgtggatggactgttcttccttccttctggactg ccttctagttcttcatcagtatgttatcaaactctgtctcagccttcagtagatcagcca gttctacctcaggaggagtttctcactggatatttttgtcaaggtgaaagatctctgcca cagttagaaatacctcccaaaagaacagttggtatgtgtatgaaatgcttgaaattttcc acatttccttggctaactctgacttcaacagatagacacgttctttcatcaaatgaaagc tctctgagaagtaacaaccaaagtttaatttggagtacgtgtgagcttctacaggatgtg attatgcaagattttccngctgagatcttccttcaaaggccaaagattgtacagagcctt ttgtctctgctaaacctggcttttggaggagatggaggacatcggttagctttacaggct gtgtcatgcctgcaacagttgtgcattttcttgagaagtagactgaactttcacagagat ccaagtttttcttccacagtgcaaggcacagcttcccagaattcatctatgtcttactgt caagaagcaagaggtcctccttgttctcagaatccatcacctggaagtagtagccctcgg ccatctgtgattggacggacagttcaacgtcctagaggagatggtcaagattgggatgcg gcatcttccagtggaaatagtacccaaccaaatgcaaactccagaatatctctgcattca ccacttgctgtaggacatattgacctgccagatactgaaaacgaggacaccttggaatta caaatgaggcagcttagccttccccagttctgtgtttccatcttggaaaatgcaattcct cttctaagaacaggcaataggagagtgacaatggaagttcttgacttgcttgttgaagac atgttccttattggtgatgctatttctgaaaatgtttgggaagatgatagcctttttgca ctgcaactgaaagataaattgcttatgatcttggattttcttggagaagctatattatat cacaaaaccaatataagtgcagagcagcctgaggtgatgttggtacatcacagaatggca tttgttagtatttcacttttcactgttagattgctgcaaatactgctccctgtagaaaag gcgagtaaagttttacagaagagtttgctgaatgctttatttcttctctctctggacgtg tccttctccttggaatacccaagcattcatgaatccattgtagcctatctggagcagatg agtactgagaactacaatatttataagcaaacttcagaagctgcatattcaattgaatgc acttgtagcttcatgagtgaagttcataagaagggagacaagaatctttctgaactggta gaattggcaggtcaggccttgagtagtctgccctaccatcaacactttcccttgcttcag gaatgcattcacatatgctcaaatatttggaagtctgccgaggctaactcattgctccag gctgagggtcagaaggtgcttctccatctattatctcatcctatgctgaatataaaaact gaagcctatcattgctgcttggaagtggttaaggactgtttaggtattcataatgttgtg aagcctgtttcttcaatctgccaaggaatacatttccttcttcatccaaaagttttatat gaaatctgtacgtttggccttccggaagctaagaatgaggtgaactctacagccaaggcc attctgatacatctattgcagggacgattagtaatggcagtattgacttggaacaagttt attgaggcactctgtcctatcattcctgttttacagggttatgcggatacaaaagataca ctaggtaactgtattctcactttgagtgaaacagcatctgacaaaggagatggtattctc cctagaactactagactacgagctgctctacgccttctcttctcaaaaaagcagttggtt cgttctatggcacttaaacatttaacatttcatcttttgaatgaagaaggggcaaatctg aaacgcccacatatacatgctagtgtgctttccagtatttcaaacttatttattattgaa agagctattgagctgaaattggatgataaaacagagtcaataattaaggcagaaactgtt gagaagctgtatgacatcttgacttctgatgctgttgacctagttttgcagaagtctgca gccgaacagctagctatcattttagaagataccaaaatgcatggcattgtgaaaaagtta ggtgtgatagaaaggattttgacttaccttaatgaatgtgtacacgtggatggcaagctt atggaatccatagtgttaccatgtctgacgctcttacgcaaacttgtatatgctgatccc attgttcgtctgtctctagcacagcaatcatctttactgcttttgctattcagagttgcc ctgatatttcaagacaacggtgatgttttaactgaagctacagtattgctttgtctcttg ttgtttgatgaagtggcaagaacagaaatgtggtatgaaaaagctgttatttagggtgat ggtataaccatcaatgatactggcctacctgccttcagtttacctgttgctgttgttaga aggtatcatctcccagtaaggatcactgctcatcacgtagttagccctaatactgttgtg gtgccattgtcttctgagtgcttggctatgaaacctgtgtcagatatgctaaagatggct tggaatctgtcatggtaccatgggatcaaaaacctattgcagctgataaattatgagaag gaagcagaaacatttttagactcactaaaactatcctcagaagacattgttatactaaaa ataactcacacagactatggactgcaggattgtctcaattcagtcattcaaggagtatcc cacagggatgttagggctgctctcattaggcttaatttttacattctgaatgacagactt gcattaaaatgcagttctgggtcttgtgtaaccactttgaagagctttgtttggcaaaaa gcaataaacagatttctgcaagtgcttccagcttcttcagaggatgagaagcttttagta gatatcttaagatttttaaacaaattgcttaaagaacagagatcaagtttggagtcagac catataaagtggatcctgaaatcatttcttaaaaatgagcccaaatcccttttggccctc ctggtgcgaccagaatcccaaatgcagaatgaaatagatgacatacagactcgtgtcagg cagcaacttgataaagaactcattcgtctttttaacacattgttactttgttccttgtca gtgactgacagagaggtcttgcaacttgctggctctttcagaactgagctggctctgaat ctgctacaatgcttaaggctaacagatgcaccacatttttatggccttccttcactggag agaacattacgaggaatggttcatgttactgcacttccaaactggagtacctactctgct gcagttgaacctgtgacaatttgtaagaaatatttaacaggtcttcttgaggtaatttct tcgttttatgttgaatggggaggaaacgctatgtccttcatgggaaaaggggttacaaaa agcacagtgctttgcttgcttcacttatctcatgaaatgatggctcaagcgaaggatatg gactggatatctctttggtctttgccttatgataccagtgaagaacaagcttctcggcta ggtctggcgtggctgattcctttatgggtagacagagaccctgaggtcagatttacagca cttggaataggatcagctcttacatctcttgaaataggatgtatcgctttagcagaaagc tgtcagaacatctcaggaggactgtgggcaacggtgataaacatccttctggaccaatct gaatgtagtgtggtacgcagggaggctgcttttattctacaaaatctccttgtgattcca attccttcagaagatgtgaaagattgtttttggcatggtccctgtgtacatgatgaagaa tctggcctctgtcagacaggaaagcctgcactaaagacccttttgtatcactgccaattc tatgaacacgtgaatcagatggtgaaacactgttacctaggatgttatatgtttgatttg aattcttccaaggaagacagcctcataatagaagaaggtggtataaccgattttgatgat tcccttaatctttggagggctccatccagtcaaagccgatcttcacattctcagtcaaca tctgaaactatgatttggtatgcatcaccatcactggggagtgttactgagcttcaggca atagttgcagcaaattcaactagttttattcctgaaaatgcagctgatcgacttagggca caaggtcaaagcaatacaaccacaacagaatctccaagtcaacgtaattctcccatgtct gctactctgtctaaacagcatgctgtagtcacacctgcccttttgtcagctgtttgcagc cttctgcacaatctgctggttgtcacaccaagagatactggaattgctcttcaacaagca catttgctaacagctctcagcagtcttgtaagcgctaacctggttgagaggtgtatcttg gaactgaaagctccactgggtcatccatgtcatatagaacatgtaaaagaccaggtgtta ctactacttcagtacttgtcatctgtatccaggcttctgaaatcatgtttattggtggac tctcagcttgtaatccaggatgaactgttgaaacctctcttgggaaataccttcaagatt ctctcaatcagctccaaagatgagttagataccgagttaacttctgtgcttcatgaaaca tgggtagaccttttcagccttctaagtacattattgtggaagggtggtcaaatgtgtctt tcgtctgtgacagcagcccttgcaaatcactgtacagcaataattggtaccatttgtgat tgtatacatctgtcagacacatatcctgctttatatatagctagtttacagttcctctct gtcattttgaatgaggaaggaagaagacaactccaagataaagacagtatatgtcagaat ccaactatgagctttcttctggatcacgttgaaggatgccaggcatcagtagctcaactt actgcattaattattcaggtttgtgaaagaaaatctgccaaggatgtgctgaaagaagtt actacaaatgcattgctatctctgttagctgtcagcaaaaacgcccagaaatgtgctttg gaagttgatctgataggcagctgtatagaagacatgaaacatatacatgcacaactgaat ttggattccctaaagcctgggaaggcacagaaaaaaaaggaggataaccttatcaagcag ttaaggtgttctatgcagctcctcagaaactgcctctttcaaaatgaagaatgcaaaatg gcagcactcaaaggtcatcttgttcctgttctgcattcgctatggccatggtttttaaca gacgattcctcaatgcaaatagctctgcatttactttgtgtctacactgcaaactattct gcaggttgtgcttcactttgttgggccagtggtggacaatcatcacttccatctgcacga agtgcagctggcaattcattaatgcataacatcttaaagttggcttcccaagtgtcaaat gataactgccctattcagcaggtggtcttttgtcttctttctaaccttgctctgtctcat gactgtaaaggaattattcagaagagtaacttcctgcagaactttttgtctctttcatta ccaaaaggaagtcataaaaatcctggtgctgtgtctactctttggctaaagctactactg aacatatcttttggagaagatggacagcagatgataatgaagattaatgggtttttagac cagattgtggaaatgtgcaaatacaaacacaagagcagccaacatttagcacttcttatt ctacataacgtatgttttagtccagctaataaaccaaagatactagctaatgataaagca attgcagtactgtctacctgtttggaaagtgatagttgtgctgttcagagaataggagca gcctcgctttgggctttgcttcacaactatcagaaggcaaaagtgactttgaagaatcca tcaataaggagaaaaatagatgaggcatattctttagtgaagaaaactgctccacagcca gaagaaaatgaattgcatgcctactatttaaaatgcttagagagtatagtgcagcttctt gattcttaa

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