Chaetura pelagica (chimney swift): 104386984
Help
Entry
104386984 CDS
T08631
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03022
Basal transcription factors
cpea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104386984
09124 Replication and repair
03420 Nucleotide excision repair
104386984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104386984
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104386984
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104386984
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104386984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
IBR
Motif
Other DBs
NCBI-GeneID:
104386984
NCBI-ProteinID:
XP_009993969
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDETGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKNKRAEKMTEL
SGNSKKHITALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVFSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLENNSEPGLTLGGYFCPQCRAKYCE
LPVECKVCGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDLFVHDSLHCCPGCIHKQTTPESG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaacccgagcggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attctcaaagaagatgaaaccggatctctgaaagcgactattgaggacattctgttcaag
gcgaagaggaaaagactctatgaacaccatgggcaggttcgacttggaatgatgcgtcac
ctctatgtggttgttgatggatcaagaaccatggaggatcaagacttaaaaccaaataga
cttacttgcactttgaagttactggaatattttgttgaagagtactttgaccaaaatcct
attagtcagattggcttaattgtaaccaagaataaaagagctgaaaaaatgacagaactc
tcaggtaactcaaaaaagcacataactgctctgaagaaagcagtggatatgaactgcagt
ggggagccatcgctgtataattcactaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttggtagtcttcagcagtctgacaacatgtgatccagcc
aacatctatgatctcattaagtgtttaaaagcagtcaagatcagagtatctgtcattggc
ctgagtgctgaagttcgagtctgtacagtacttgcccgagaaacgggtggaacataccac
gttattttagatgaaagtcattataaggagctgctgatgcatcatgttagtcctccacct
gccagttcaagttctgagtgctccctcattcggatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccatccttcagcatggcgcatttggaaaacaacagt
gagccaggtcttacactgggtggatatttctgtccccagtgcagagccaaatactgtgaa
cttcctgtggaatgcaaagtctgtggtcttacattagtgtctgcgcctcacctggctcgg
tcttaccatcacttgtttcctttggatgcctttcaggaagtgcctctggaagagtatcaa
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaacgtttacatatgt
aaagtgtgtcagaatgcattttgcgtggaatgcgatttgtttgttcatgattctctgcac
tgctgtcctggatgtattcacaagcaaacgactcccgaatctggatga
DBGET
integrated database retrieval system
