Chaetura pelagica (chimney swift): 104387168
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Entry
104387168 CDS
T08631
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpea04054
]
104387168
Pattern recognition receptors [BR:
cpea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
104387168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR_2
TIR
Motif
Other DBs
NCBI-GeneID:
104387168
NCBI-ProteinID:
XP_009994167
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MGLPGVPGVFLGFLGGFPGGVSPYRFRNYSFRNCIQSPRDPRRFRCLQRFLRSVPAALGD
LPSSATSLNLSHNLLGHLPGGSFRPLPSLQTLDLSHNLLASVSPGAFLGLGGLSSLDLSR
NFLARLPGGVFLGLGNLSRLRLDHNPLTTLATDSLSPLANLTHLSLRGGRLVTLGSVVPS
LLPLPRLQLLDLCGNRLESLGPGPPFPLSLVTLKLCNNSLGGLVGGTPELFPVSLRFLDF
SYNNITEAAPFSRLRLGNLSRFRVTLGTLRLRRNGLSVLGEGALASCPPVASLDLSGNRL
KGLGCPGGWLRREQREKLRELVLEHNALRRPPRCPPTPNLLPNLLRISLRFNRILLVGKG
AFLHSPNLRELRLDVNGLARLDREALGGLRDLRELRLDNNLLSDVFPGSFSELGKLLRLN
LRNNRVAVLFPGAFRGLGNLQVLDLGGNNLRHLSAAGLGGLGELRKLYLDRNRLLEVSSA
SFRPVQLTLGVLDLXXXXXXXXXXKGPPPFRHLRGLYDLKLQAQQPHGLRVIPHRFFQGL
GRLRALYLGQNELLALPSDAFDELGQLRFLSLADTGGGLGELPPGVFKNMSLLRSLDLEN
AGLRWLDRGVLGNLSRLELLRLAKNELGGLGEGLGGFLPSLKYLDLRKCPLSCSCPNAWF
PGWLERGGFQVVYFYNYTCGGRPKTFLHLFDTQVCYQTLGMYLFVGTTPLVLGVLLVPLL
GRRWGWGLRYRWFQFRAWLGGPGRRDPRVFPYDGFVSYSSSDEPWVLGELVPRLEEEGGL
RLCLHHRDLPPGRAVLDNMAQGIRSSRRTLCVLSRSYLSSQWCCLELQLASFQLLEQLRG
VL
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggggttgccgggggtcccaggggtgttcctggggttcctgggggggttcccagggggg
gtctccccttacaggttcaggaactacagcttccggaactgcatccaatccccccgggac
ccccggcggttccgctgcctccagcgcttcctgcgctcggttcccgccgcgctgggcgat
ttaccctcctccgccacctccctcaacctctcccacaacctcctgggccacctcccgggg
ggctccttccgccccctcccctctttgcagaccctcgacttgtcccacaaccttttggcc
tccgtttccccgggggcttttttaggcttggggggtttgtcctctttggatttatcccgg
aactttttggcccgacttcccgggggggtttttttggggttggggaacttgtcccgactc
cgattggaccacaaccctttgaccaccttggctaccgattccctgagcccactggccaac
ctgacccacctgtccctgagggggggtcggttggtcaccctgggctccgtggtcccgtcg
cttctccccttgccccgcctgcagctcctggatctgtgcgggaaccgcctggaatccctg
ggtcccgggccccctttccccctttccctggtgaccctgaaactctgcaacaactccctg
gggggtctcgtgggggggacccccgagttgttccccgtttccctgcgtttcctggacttt
tcctacaacaacatcacggaagcggcgccattttcccggctccgtttgggcaacttgagc
cgtttccgagtgaccctggggaccctccgtttgcgccgcaacggtctgtccgttttaggg
gagggggctttggcttcttgcccccccgtggcctctttggacttgagtggcaaccgcctg
aagggtttaggttgccccgggggttggttgaggagggaacagagggaaaagctgcgggaa
ctggtgctggaacacaacgccctgcggagacctccgcgctgccccccaacccccaacctg
ctccccaacctgctccgcatctcgttgcgcttcaaccggatcctcctggtgggcaaaggg
gcttttctgcactccccgaacctcagggagctccggttggatgtgaacgggttggcccgt
ttggaccgggaagccctgggagggttgagggacttgagggagctgaggttggacaataac
ttgttgagcgacgttttccccgggtcgttctcagagctggggaagctgctccggctcaac
ttgcgcaacaaccgagtggccgttttgttcccaggggcttttcggggcctggggaacctg
caggttctggatttaggggggaacaacttgaggcacctgtcggcagccgggctggggggg
ttgggggagctgaggaagctttacctggatcggaaccggctcctcgaggtgagttcagcc
tcattccgacccgtccaactcaccttgggggtcttggacctgnnnnnnnnnnnnnnnnnn
nnnnnnnnnnccaagggaccccccccgttccggcacctccgggggctttatgacctcaag
ttacaggcccaacaaccccacgggctccgggtgatcccgcatcgtttcttccaaggtctg
gggagactccgggctctttatttgggtcagaacgagctcttggctcttccctccgacgcc
ttcgacgagttggggcagctcaggttcctcagcttggccgacaccgggggaggtttgggg
gagttgccccccggggtcttcaagaacatgagtctcctgaggagcctggacctggagaac
gcggggctgaggtggttggatcggggggtcctggggaacttgagccgcctggagctgctg
cgtttggccaagaacgagctgggggggttgggggaagggctgggggggtttttaccctcc
ctgaagtacctggatttgaggaaatgccccctgagctgctcctgccccaatgcctggttc
ccggggtggctggaaaggggggggttccaggtggtttatttctacaactacacgtgcggg
ggtcgccccaaaaccttcctgcaccttttcgacacccaagtctgttaccaaaccttgggg
atgtacctgttcgtggggaccacccccctggttctgggggtgttgctggtgcccctgttg
gggcgacgttggggttgggggctccggtaccgttggttccagttcagggcttggttgggg
ggtcctggaaggagggacccccgagtttttccctatgatgggttcgtgtcttacagctca
tccgatgagccatgggtgttgggggagctggtgcccaggttggaggaggaaggggggttg
aggctctgcctgcaccaccgggacctgccccccgggagggcagttctggacaacatggcc
caggggatccggagcagcaggagaaccttgtgcgtgttgagcaggagttacctcagcagc
cagtggtgctgcctggagctgcaactggccagtttccagctgctggagcagctgcggggc
gtgctg
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