Chaetura pelagica (chimney swift): 104387174
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Entry
104387174 CDS
T08631
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104387174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104387174
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104387174
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
HECT type E3
104387174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Peptidase_C25_C
Motif
Other DBs
NCBI-GeneID:
104387174
NCBI-ProteinID:
XP_009994173
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDQNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNNYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHVVKHIFSGGDQTFVLCSKFENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLVWFLHQAGMKVRPSIIQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKIMVQKDNREEFVEAYVNYIFNL
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIVIQSTASGEQYLPVAHTCYN
LLDLPKYSSKEVLSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggatactcatcttttggacaacctggaataggtagcaacctccaggtc
atcattcctgaaccacaagtttatggattcattcatgaccaaaatgtcaaggaggtggca
tgtggaggaaaccactctgtgttcctgttggaagatggggaagtatatacctgtggcttg
aacaccaaaggccagctgggacatgactgtgaaggaagcaagccagaacaaattggagcc
ctggctgggcagcacatcgtgcatgtggcctgcggagagtctcacagcgtggcgctcagt
gaccagggccagctcttctcctggggtgctggcagtgatggacagttgggcctcaccact
atagaagatgcagtgacagtaccaaggttgataaagaaattaaatcaacagacaatactg
caggtttcttgtggaaattggcattgtctggctttggcagcagatggccagttcttcacc
tgggggcagaacaactatggtcagctgggcttgggtaaagaatgtccctcccaagccagt
ccacaacgtgtcaagtctcttgatgggatccctttggctcaggttgctgcaggtggagcc
cacagctttgccctctctctctcaggagctgtttttggctgggggaaaaacagctcagga
cagctgggactaagtgatgaacgagaccgagaatccccttgtcatgtgaagctgttgcgg
tctcagaaggttgtgtacatcagctgtggagaggaacacacagcagttctgacaaagagt
ggaggggtgttcacgttcggtgcaggttcgtgtgggcaactgggacatgactccatgaat
gatgaagtgaacccccgaagagttcttgagctgatgggcagtgaagtgtcccagattgct
tgtggcagacatcacactttagccttcgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacttgcaatgttaagtgtccctctcct
gtcaagggtcactgggcagctcacaatgggcaactctcagggaaacctgatgcctgtaaa
tatcacgttgttaaacatatattctctggaggagaccaaacatttgtcctttgctccaaa
tttgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcatgctggaatggaagcttc
ttggagaagaaaattgatgaacattttaaaaccagtccgaagatcccagggattgatctg
aactccaccagagtgctgtttgagaagctgatgaactctcagcactccattctcctagac
cagatactgaagagctttgaaagttttttgattcctcagctgtccagttcaccaccagat
gttgaggcaatgaggatctacctaattctccccgaattcccacccttccaagactcgaag
tattatattacattaactcttcctctagcaatggctattctgcgcctagataccaacccg
agcaaagttctagataactggtggtctcaagtgtgcccaagatatttcctcagactagtg
gacctctataaaggtgcagtggtttacctgctcagtggaagaaagacactgttgattcca
gtcctgttcagtagctacattacagctgctctcagacttctggagaaactccacaaggtg
aatcagaaggttaaacatgtagaatatgataagttttatatccctgagatttccagtttg
gtggacattcaggaggattatctggtgtggttcttacatcaggctggaatgaaagtaaga
ccatctatcatccaggatgctgtgacactctgttcatatcctttcatcttcgatgctcag
gctaagaccaagatgttacagacagatgcagaactacagatgcaggttgcaataaatggt
gcaaatttgcagaacgtcttcatgcttcttaccctggagcctctgctggccagaagccct
ttcctggtactccacgttcgcagaagtaacttagtcggtgatgctttaagggagttgagc
attcattcagacattgatttgaaaaagcctcttaaagtcatctttgatggtgaggaagct
gttgacgctggaggagtgacaaaagaatttttcctcctgttgttaaaagagctcctcaac
cccatctatggcatgttcacttactatccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgctatatac
aacttcacagtagtagacctccactttcccttggctctgtacaaaaaactcttgaatgtg
aagccctgccttgaggatttgaaggagctatcccctacggaaggaaggagtcttcagcaa
cttttagattaccctggggaagatgtagaagagacattctgcttgaattttacaatctgc
agggaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaattatg
gtgcagaaggacaatagggaagaatttgttgaagcctacgtaaattacatcttcaacctc
tccatccatgagtggtacacggccttttccactggcttcctgaaagtgtgtggtgggaaa
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaattggaggagagcgctgtctataagggagactacactgcgacacaccca
acggtgagaatgttctgggaaacctttcatgcatttcccttggaaaagaagaagaagttt
ctcttgtttctgacaggcagcgaccgcattcccatctatggcatgtccagcctgcgcatt
gtcatccagtccactgccagcggggagcagtacctgcccgtggcacacacctgctacaac
ctcctggacctgcccaagtacagcagcaaggaggtcctcagtgcccggctggtgcaagcc
atcgaccactacgagggctttagcttagcttga
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integrated database retrieval system
