Chaetura pelagica (chimney swift): 104387481
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Entry
104387481 CDS
T08631
Symbol
RQCD1
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104387481 (RQCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104387481 (RQCD1)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104387481 (RQCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
ADSL_C
Motif
Other DBs
NCBI-GeneID:
104387481
NCBI-ProteinID:
XP_009994553
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MHVFGAKKILGKVWVRLGKYACTEVFLSPSQPVPTALAQVDREKIYQWINELSSPETREN
ALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALL
QCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINF
LLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMV
LQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLA
QLVKNLQEGQVTDPRGIPLPPQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtttttggagcaaaaaagattttaggaaaggtttgggtgaggcttgggaaatat
gcttgcactgaagttttcttgtctccctcccagcctgtgccaacagcactggctcaggtt
gaccgtgaaaagatctaccagtggatcaatgagctgtccagcccagagacacgggagaat
gcactgctggagctgagcaagaagcgtgagtctgtgcctgaccttgccccgatgctgtgg
cactcgttcggcacgatcgcagcactccttcaggaaattgtaaatatttatccctcaatc
aatcctccgactttgacagcccatcagtccaacagagtctgcaatgctttagctctgctg
cagtgtgttgcttcacatcctgaaacgaggtcagcttttctggcagctcatatccctctc
ttcctgtaccccttcttgcacacagtgagcaagacacgtccgtttgagtatctgcgcctc
accagcctcggagtgatcggggccttggtgaaaactgatgagcaagaagtgataaatttc
ttattgactacagaaattatccccctgtgcttacgcattatggagtctggcagtgaactc
tccaaaacggttgctacgtttattcttcagaaaatccttctggatgacacagggctggca
tacatctgtcagacttatgagcggttttcccatgttgccatgatactgggtaaaatggtc
ctgcagctctccaaggagccatcggcgcggctactgaagcacgttgtccgctgctacctt
cgcctttctgataaccccagggcacgtgaagctctcaggcagtgccttcctgaccaactg
aaggacaccaccttcgcccaggtcctgaaggatgacaccaccacaaagcgctggctggct
cagcttgtcaaaaacctgcaagagggtcaagtcactgacccacggggcatccctcttcct
ccgcaatga
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