Chaetura pelagica (chimney swift): 104387788
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Entry
104387788 CDS
T08631
Symbol
HDX
Name
(RefSeq) highly divergent homeobox
KO
K24884
highly divergent homeobox
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104387788 (HDX)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
104387788 (HDX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104387788
NCBI-ProteinID:
XP_009994879
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
SKSALESGGTPPGTVPSTLSVPPEAAVRNVVNIARSQSQQSTWTSSNNDVIVTGIYSPAS
SSGRQGSTKQTNSSMAEIHKTSIPRLPGKGDTEFQQQHIPLGRQVPHCKNASLLVGEKTI
ILSRQTSVLNSANSIYSHTKKSYGSSSMQTAELVLPQKPMICHRPCKAEPLACQRLHKPE
HAALVSHVPPGQRANARDPSCSTQNLEIREVFSLAVTDQPQRLVGGSAVQRHCPVEGSSL
SIAMETGDVDDEYAREEELASMGAQIQSYSRYCESSSSVRAENQSAALSGPGRNVSCSSQ
MVNARDVPDNVLYHNRDYHLPARTSLHTTSSTLYNTTNPSRSTFSPHFTSSSQLRLSQNQ
NNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVA
AELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETATEV
GDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQNPVSADNVKIEIIDDEESDMI
SNSEVDQISSLLDYKNEEVRFIENELENHKQKYFELQTFTRSLILAIKSDDKEQQQALLS
DLPPELEEMDFNHASPEPDDTSFSLSSLSEKNASDSL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcgttctgtatttactgtagaacaacaaaggatattacagcgttattatgaa
aatggaatgacaaatcaaagtaaaaattgctttcagctcatattacagtgtgcacaagaa
actaaactggacttcagtgtagtcaggacgtgggttggcaataagcgaaggaagatgagc
agcaagagtgctctagaatctggaggcactcccccagggactgtcccttctactctctca
gtacctccagaagcagcagttagaaatgtggtaaatattgctcgatcccaaagccagcag
tctacttggacctcctctaacaacgatgtcatagttactggtatatatagtcctgctagt
tcatctggtagacaaggatccaccaaacagacaaactcttcaatggcagaaatccataaa
acctcaattccacgcctcccaggaaaaggtgacacagagtttcagcagcagcacatccct
ctaggacggcaagtaccacattgtaaaaacgcttccctattagtaggggaaaagactatt
attttatcgaggcaaacaagcgtcctgaattctgccaactccatttatagccacaccaag
aaaagctacggcagttcctccatgcagacagcggagctggtgttacctcagaaacccatg
atatgccacagaccctgcaaagctgaacccctggcatgtcagaggttacacaaaccagaa
cacgcagctctcgtgtcacacgtgccccctgggcaaagggctaatgccagggacccttct
tgtagcacccaaaacctggagatccgggaagtgttttcgctggcggttacggatcaaccc
cagaggctggtggggggcagtgctgtgcagagacactgccccgtggagggcagctctttg
tccattgccatggaaacgggggacgtggacgacgaatacgctagagaagaggaactagcg
tccatgggagcacaaatacaaagctattccagatactgtgagagcagcagttctgttcga
gcagagaaccaaagcgcagccttgtctgggccaggaagaaatgtgagctgtagttcacag
atggtgaatgccagggacgtgcctgacaatgttctgtatcataacagagactaccacttg
cctgcacggacctcattgcacacaacatccagcacattgtataacactactaacccatca
agaagtaccttttctcctcattttacatcttcaagtcaactgaggctgtcacaaaaccaa
aataattaccagatttcaggaaaccttactgtgccttggattacaggttgttccagaaaa
agagcattacaagaccgtacacaatttagtgaccgagacctggcgaccctaaagaaatac
tgggacaatggcatgaccagcctgggctcagtctgcagagagaaaattgaagctgtggct
gcagaattaaatgttgactgtgaaatagtgcggacttggattgggaatcgaagacggaaa
tatcgtttaatggggattgaggtcccaccccctagaggaggtcctgctgatttctctgat
caatctgaatttgtttctaaatcagcacttaatccgggagaggaaactgctactgaagtg
ggggatgataatgacaggaatgatgaagtatcaatctgcttatctgaaggaagctcacaa
gaagagacaaatgaagctcttcagaatgaagaaattggtcacaaagatgatgaccagaac
ccagtatctgctgacaatgtgaaaatagaaataatagatgatgaagaaagtgatatgata
agtaactctgaagtggatcaaattagttctcttctggattataagaatgaagaagtcaga
ttcattgagaatgagttggagaaccacaaacagaagtattttgaactacagacatttact
cggagtttgatacttgctattaaatcagatgataaggaacagcagcaggcactgctctca
gacttacctccagaactagaagaaatggatttcaaccatgcatccccagagcctgatgat
acctcattcagcttgtcgtctttatcagagaaaaatgcctcagacagtttgtga
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