Chaetura pelagica (chimney swift): 104388044
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Entry
104388044 CDS
T08631
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104388044 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpea02000
]
104388044 (ABCA12)
Transporters [BR:
cpea02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104388044 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
104388044
NCBI-ProteinID:
XP_009995158
LinkDB
All DBs
Position
Unknown
AA seq
2511 aa
AA seq
DB search
MFQLAVTNLKQSPEFAAVYKDGSDSFSKELSCIVQSLQFSLGFLSELNLVSELQNSWIEE
KARALSGLTEGLLQSNASCSIPVQDEAAVLPPQLLKMLIPFVLNETALNSLNFSDSLAGW
NNLSMLFSVARDELHLNDLLQRIQGVFNLITQTFYSSIWDVVDSLLNTQRNLTEVAAFAK
LLEAVTNNSVDNVSALEIIGASHYILRRLNLSDLLNEFNINSSLAFLSNKTGFDSVLDIV
AHHFIVTAETLYNKTLPWTQSDQTLSPTLLITRFLFLEFENTILQVTVNNSYNPYLMCLI
NATEAEDSTLTEKILLLLKQTHPTKNPSMQNLTSEKHSSIPELLKLKISHFRDLTTLLCD
HETFKSMQHVCHLPNISFGELCEQGQSQEQLLHAIELSNQVVTNVLNHRRISQELQNILI
GNATNIWAQVKWFQEQVPEIAVFQEIPQYMATLNSMLNVTENSTESSKQEKLRDVFKSVD
QLREDLKNTTVMSTASIEALLEAPLPENSSQLISQLLQLESCSDPPADPQLQRVAEEFCN
LPPSERAREGYILGVTLLQHLDIYQFLYKMFFPKELQKPVDKMLDLLTKMKYFRHQVESG
VDPLLQAIHSLKKLRQSRNVPLTKALSKPSNFRVTHGTFKSMAKVLCNQEITPLFFESLL
PGFGDPVSNSSSVEDAYVQEMMMKYGIPHDSTPFCLSFYLDLVKTPTGALIWSFLKPMVL
GKILYTPDTVETRAIMGKSNATLEQMADLALKSQEWLDKSPVIMNSLTKLNQTVPMIKNT
LQNPFVQVFIKLMVDLDAAELLSQINKLDDIRLELQNNTDIVDQLNTLATLAVNVSSCIS
FNRIRAVRSLEEMEALAKELFLKNELFASIIFKLPSSPSGRSVGGDLALPPVLNYTIRMS
SRITQTTNRIRERIWTVGPHNSTSQSQIYSRAFIYIQDSIERAIIELQTGKKPEEIAVQV
QAMPYPCYSKDMFLTSVTYSLPFALMAAWVLFIADFVKRLVQEKDLRLYEYMKMMGVNAS
SHLIAWFIECAIFLLITVTFLILVLKVGDILPKTNTLLLFLYLMDYSLSIIAMSYFISVF
FNNTNIAALVGSLVYILTFFPFIVLLVIENHLSFSVKSVLSLLSPTAFSYASQYIARYEA
QGIGLQWDNMYKSPMIGDNTSFGWMCWLILIDSFIYFILGWYIRNVFPGRYGMAAPWYFP
LLPSYWVEYNSYLPLWKGKCRGLLFTKLMIKKDATLNNKICAPPPHLEPEPTDLTLGVSL
CGITKVYGSKAAVENLSLNFYEGNITSLLGHNGAGKTTTISILTGLFPTSSGTIFVYGKD
IRTDQEVIRKSMGVCMQHNVLFNYLTTKEHLLLYGYIKVPHWSNQELYQEVKRTLKETGL
YSHRHKLAGSLSGGMKRKLSIAIALLGGSKVVILDEPTTGVDPCSRRSIWEIISKNKKGR
TIILSTHHLDEAEVLSDRIAFLEHGGLKCCGSPFYLKETFGDGYHLTLTKKKIMIEECDT
TAVTSLIQSHLPEAYLKEDIGGELVYVLPPFKSTVSGAYQGLLRALDTSLSDLHLGCYGI
SNTTVEEVFLNLTKELGKDQQEDAELFQQLPGASGQTGSDGMSVSTDTFTERDDQLLIRS
KSLQGLPLLLKKTSALFIKRFHHTRRDVRGFIAQVILPVLFVMAAMGLGTLRTKETEYPE
LVLSPSLYGTADQADFFGNFNETTEALVASMLAFPGTDNTCMNQSNLQCLKEDMLGPWIV
SGSQRTKYSACNCTDGIQTCPQTNYTPPHRRTFSTRTLYNLSGHNVETYILATAKDFLQK
RYGGWSFGLPLTTDLQFDIRPVPPNRTLTKVWYNPEGYHSLPAYLNSLNNFILRANLPNN
ETSRYGIFLSAHPYPGGQSQEQVMLNSLLDIIVSMSVLVGYSITTASFVLYVVKEHQTKA
KQLQHISGLGMMSYWVTNFIYDLVLFMVPIGLSIGVISSFQIPAFCNNSNLLAVFLLLLL
FGYATFSWMYLLAGVFKETGMAFIVYVCVNLFFGINTIITHSVVFLLSQEKATDQGLHDL
AENLRHAFLLFPQFCFGYGLIELSQDQALLGFLKAYGVDYPDKTFKLDKTTSKLFAMFVQ
GTVFFAIRLTVHDRMIQRAWNKILEFLFDRVHGKAALLPPVAEEDGDVQAERNRVESGKA
DFDVVQLQNLTKIYHLPQKRIVAVKNIXLFFPTPQCFGLLGVNGAGKTTIFKMLTGDIGA
SSGRLRVQGPSGSLNDISEAHWSLFGYCPQEDALDDLLTVEEHMYYYARLHGIPERNIKG
VVLQLLHRLNLMAYKDRVTSMCSYGTNRKLSTALALIGNPSILLLDEPSSGMDPNAKRHL
WKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGSFQCIGSLQHIKSRFGRGFTVKM
HLNSSTVSTDMLTEFMKSHFPNTCLKDRHFNMVEYHVPVSAGGVANIFDLLEASKAAFNI
RHFSVSQTTLEEVFINFAKDQGDPDGVDAGPDVTLDSSDTSSQDSTLSSIY
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcttgccgtaacaaacctgaagcagtctccagagtttgctgctgtctacaag
gatggcagtgacagcttttccaaggagctgtcatgcattgtccagtctctgcagttttct
ctgggtttcctttctgaattaaaccttgtgtctgagctgcagaactcttggatagaggag
aaggccagagctctgagtggcctcacagaggggctgctgcagagcaatgcttcctgctcc
atcccagtgcaagatgaggctgctgtgctcccaccccagctgttgaagatgctcattcct
tttgtgctgaatgaaacagcactgaactcactgaatttctctgacagcttagcaggctgg
aataacctgtccatgctcttcagtgtggcacgggatgagctccacctgaatgacctgttg
cagagaatccaaggtgtcttcaacctcatcacacagactttttactccagcatctgggat
gtggttgacagtttgctaaacacccaaaggaacctgactgaagtggctgcctttgccaag
ttgttggaagcagtgacaaacaactctgttgacaatgtgtcagctctagaaatcatagga
gccagtcactacattctcaggaggctgaacttatctgatctgctcaatgagttcaatata
aattccagtttggctttcctctccaacaaaactggttttgacagtgtgcttgatattgtt
gctcaccacttcattgtcactgcagaaaccctgtacaacaagacccttccttggactcag
agtgaccagactctgtcaccaacccttttgatcacacgatttctgtttttagaatttgaa
aacaccatcttacaggtgacagtgaataacagctataacccttacctgatgtgtttaata
aatgccactgaagctgaagacagcacactgacagaaaagatccttctgcttttgaagcaa
actcatccaacaaagaacccttctatgcaaaatcttacctctgagaaacattcatccata
ccagagctcctgaagctaaagatctcacactttcgggatctgacaacacttctttgtgac
catgagaccttcaagtccatgcagcatgtttgccatctcccaaacattagctttggagaa
ctgtgtgaacaaggtcaatctcaggagcagctcctccatgctattgaactgagcaatcaa
gttgtgaccaatgtactgaatcacagaagaatctcccaagagcttcaaaacatactgatt
gggaatgccacaaacatctgggcacaagtgaagtggtttcaagaacaagtaccagaaatt
gctgtctttcaagagattcctcagtatatggctactttgaattccatgttgaatgtcact
gagaattcaacagaatctagcaagcaagaaaagctaagagatgtatttaaaagtgtggac
cagctaagagaggatctcaaaaacacaacagtgatgtccacagccagtattgaggctctt
ctggaagcacctctcccagaaaacagcagccagctcatctctcagctccttcagctcgag
tcctgcagtgaccctcctgctgacccacagctgcaaagggtagcagaggagttctgcaac
ctccctccctcagagagggcccgtgagggctacatcctgggggtcaccctgttacaacac
ctagacatctaccaattcttatacaagatgttttttcctaaggaacttcagaaacccgtg
gacaagatgttagacctcctgacaaaaatgaagtatttcagacaccaggttgaatctggt
gttgatccattgctacaagctattcattcactgaagaagctccggcagtccaggaatgtg
ccactgaccaaggcattgtctaagccaagcaactttagggtaacacatggcacatttaaa
tccatggcaaaagtcctctgcaaccaggagatcacacctctgttttttgagtccctgctt
ccaggttttggagaccctgtaagcaacagttcttctgtggaggatgcctatgtccaagag
atgatgatgaaatatgggattcctcatgattccacaccattttgcttatccttttacctg
gacctggtcaagaccccaactggagctttaatttggtcttttttgaaaccaatggtgctt
gggaagatcctttatacaccagatactgtagaaactcgagcaatcatgggaaagtctaat
gcaaccctggagcagatggctgatctagccctgaagtcccaggagtggttggacaagtct
cctgtcatcatgaattcactgactaagttaaaccagacagttccaatgatcaagaacacc
ctgcagaatccctttgtgcaggttttcatcaagctgatggtggatttggatgcagctgaa
ctgttgagtcaaataaataaactggatgatattcggctggaattgcagaacaacactgac
attgttgaccagcttaatactttagctaccctggctgtcaacgtgtcctcctgcatctcg
tttaatcgcatccgggcagtcaggagcttggaggaaatggaagcactggccaaagagctc
ttcctgaagaacgagctttttgcaagtatcattttcaagctgccttcaagccctagtgga
cgttcagttggaggggacttggcgctccctcctgtgctcaactacaccattcgaatgagc
agcaggatcacccaaaccaccaataggataagggagcgcatctggaccgtgggcccacac
aactccacctcccagagccagatctacagccgagcctttatttatatccaggacagcatt
gaaagagccattattgaactacagactggcaagaaaccagaggaaatagctgttcaagtc
caggccatgccttatccctgctacagtaaggacatgttcttaaccagtgtgacctattct
cttccatttgctctgatggctgcctgggtgctgtttatagctgattttgttaaaagactt
gttcaagagaaagatctgaggctctatgagtacatgaaaatgatgggtgttaatgccagc
agccatttaattgcctggttcatagagtgtgccatcttcctgctcatcactgtcaccttc
ctcatccttgtcctaaaagtgggtgacatccttcccaaaacaaacacactgctcctgttc
ctgtaccttatggactacagcctgtccatcatagccatgagctacttcatcagtgtcttc
ttcaacaacaccaacatagcagccttggtgggcagtctcgtgtacatcctcaccttcttc
cccttcattgtgttgcttgtcattgagaatcatttgagcttctctgtgaaaagcgtgctg
agtctgttgtctccaactgcattcagttatgcaagtcagtacattgctcgatacgaggca
cagggcataggtttgcagtgggacaacatgtataagtccccaatgattggagacaacact
tcctttggctggatgtgctggctcattctgatagactctttcatttacttcatcctggga
tggtatataaggaatgttttcccaggtagatatggcatggctgctccctggtacttccca
ttgcttccatcttactgggttgaatacaacagttacctccctctctggaaggggaaatgc
agaggccttctcttcaccaagctgatgataaagaaagatgccaccctcaacaacaagata
tgtgccccccctcctcacctggaaccagagcccactgacctcaccttgggagtctccctc
tgcggcataacaaaggtttatggatccaaagctgcagtggaaaacctcagcctcaacttc
tatgaagggaatatcacttcccttctgggacacaatggagctgggaaaactacaaccata
tctattttgactgggttgttccctacatcatcaggtactatctttgtgtatggcaaagac
atcaggactgaccaagaagttatcaggaagagcatgggggtgtgtatgcagcacaatgtg
ctctttaactacctgactacaaaggaacacctgctgctctatgggtacatcaaagttcct
cactggagtaaccaggagctctaccaagaagtgaagaggactttgaaggagactggactg
tacagccatcgtcacaagctggctggctccctgtctggggggatgaagaggaagttgtct
atagctattgccctcctgggtgggtcaaaggtggtgatactagatgaaccaaccacaggg
gtggatccgtgctctagaagaagtatttgggaaattatctccaagaataaaaaaggcaga
accatcattctctcaacacatcacttggatgaagcagaagttctgagcgatcgaatcgcc
ttcctagagcacggagggctcaaatgttgtggttccccattctacctcaaggaaaccttt
ggtgatgggtaccacctgacactcaccaaaaaaaagatcatgatagaagagtgtgacacc
acagcagtgacctccttgatccagtcccaccttccagaggcttatctgaaggaggatatt
ggtggagagctggtgtatgtgctgcccccattcaagtccacagtctcaggggcctaccag
gggcttctcagggccctggataccagcctgagtgatctccaccttggttgctacgggatt
tccaacacaactgtggaagaggtgtttctcaacctgacaaaagagctagggaaggaccag
caggaagatgctgagctgttccaacagctgcctggagccagtggtcaaactggcagtgat
ggaatgtctgtgagcacagataccttcacagaaagagatgaccagctcctgatcagatcg
aaaagcctgcaggggttgcctttgctacttaagaagacatcagctttgttcatcaagagg
ttccaccacacccggagggatgtcagaggcttcattgctcaggtcatcctcccagtcctc
tttgtgatggctgcaatgggacttgggacactgagaactaaggagactgaatatcctgag
ctggtcctctccccctctctgtacggcacggccgaccaggcagatttctttgggaatttt
aatgaaaccacagaagctttagttgcttcaatgcttgctttccctggaacagataacacg
tgcatgaatcaaagcaatttgcagtgtttaaaggaggacatgctgggcccatggattgtc
agtggaagccagaggactaagtattctgcctgcaactgcacagatggcatccagacatgt
ccacagaccaactacactccccctcacagaaggaccttctccacacggacgctttacaac
ctgtcagggcacaatgtggagacctacattctggcaactgccaaagacttcctgcagaaa
aggtatggtggctggagctttgggctgcctctgacaacagatctgcagtttgatatcagg
ccagtgcctcccaacaggaccctgactaaggtgtggtataatcctgagggttatcacagc
cttccagcctatctcaatagcttgaacaacttcattcttcgagctaacttgccaaacaat
gagacttccagatatggtattttcttatcagctcacccatatccgggaggacagagtcag
gagcaagtaatgctcaacagcttactcgacatcattgtttccatgtctgttttggttggc
tactctatcacaacagcaagctttgtgctctacgtggtaaaagaacaccaaaccaaggcc
aaacaactgcagcacatttcaggccttgggatgatgagctattgggtgactaacttcatt
tatgatctggtactttttatggtccctattggactctcgataggagttatttcatccttc
cagataccagctttctgcaacaacagtaacttactggcagtatttcttctgctgttactg
tttggatatgcaacgttttcatggatgtacctgctggctggggttttcaaagaaacagga
atggccttcattgtttatgtctgtgtcaacttgttctttggcatcaacactatcataact
cactcagttgtatttctgctctcccaggaaaaggccacagatcagggcttgcatgatctt
gctgaaaacttaaggcatgcattccttctgttcccacaattttgctttggctatggtttg
attgaactctcacaggatcaggcacttctgggcttcctgaaagcttatggagtggactac
cctgacaaaacctttaagttggacaagaccacatccaagctgtttgccatgtttgtccag
ggcactgtgttttttgccattcgtctcacagttcatgacaggatgattcagagagcctgg
aacaaaatacttgagttcctgtttgacagggtacacggcaaagcagcacttctgcccccc
gtggctgaagaggatggggacgtccaggcagagaggaaccgggtggagtctggcaaagct
gacttcgacgtggtgcagctccagaacctcaccaagatctaccacctgcctcagaaacgc
atcgtggctgtgaaaaacatcntacttttctttcccaccccccagtgctttggcttgctt
ggtgtgaatggagctgggaagacaaccatctttaagatgctgacgggtgatatcggagcg
tccagcggaaggctgagggtccagggtccttctgggtccctgaatgacattagtgaggca
cactggtccctctttggctactgtcctcaagaggatgccttggatgacttgctgacagtg
gaagagcacatgtattactatgctaggctccatggcatcccagagagaaatatcaaaggg
gttgtactccagcttctccacaggctgaacctgatggcttacaaagacagagtaacctct
atgtgcagttatggcaccaacagaaaattgtccactgctctggctctcattgggaatcca
tctattctgctgctggacgaaccgagctctggaatggatcccaatgctaaacgtcacctt
tggaaaatcatcagtgaggaagtgcagaacaaatgctcagtgatcctcacatcccacagc
atggaagaatgtgaagccctgtgtaccaggctggctatcatggtgaatgggagctttcag
tgcattggctctttgcagcacatcaagagcaggtttggaagagggttcactgtaaagatg
cacttaaacagcagcacagttagcactgacatgctgacagagttcatgaaatcacacttt
cccaacacatgcctgaaggaccggcacttcaacatggtggagtatcatgttccagtctct
gcaggaggggtggccaacatatttgatctcctggaagccagcaaagcagccttcaatatc
aggcacttctcagtgagtcaaacaacattagaggaggttttcatcaacttcgccaaagat
caaggagatcctgacggggtggatgcaggtcctgatgtgacactggacagctctgacaca
agtagccaagatagcaccctaagctccatctactga
DBGET
integrated database retrieval system
