Chaetura pelagica (chimney swift): 104388054
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Entry
104388054 CDS
T08631
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104388054 (TFIP11)
Spliceosome [BR:
cpea03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104388054 (TFIP11)
Other components
Complex C specific factors
104388054 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
104388054
NCBI-ProteinID:
XP_009995165
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MSSRCLPTPRAGTLHFEDLGSKPSGGAEGAGITVFKYHALIAFPGNCSFHGKCRLCPRQL
RSVWQSPALLSAGFTPRRAARLAPWATCGVWAERDSDEERPSFGGKRSRDYSAPVNFISA
GLKKSAAEEMSEEDSDEDEKPVKQEEVPKEFVPKKLKTGGNFKPSQKGFVGGTKSFMDFG
SWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTSQSLQ
DFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVEELKAKGRINKKLSAPQKEI
SQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPPGKDAKAQGFALPELEHNLQLLID
LTEQEIIQSDRQLQYERDMVVNLTHEIQKMSEVLSHEEKAIGNLSKVLEMVEECERRMQP
GCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKDYFKNWDPLKDCTYGT
EIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVRNIVAQWQPRNCGSMVDFLD
SWVTAVPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQARLGPPPSP
IRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNIVPKLGMCLNELIINPHQ
QHMDAFYWVVDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPNYEEITKWYLGWKSM
FSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGARENIAYLTHTERRKDFQYEAMQ
ERREAENMAQRGIGAAASSVPMNFKDLIQTKAEEHNIVFMPVIGKRHEGKQLYTFGRIVI
YIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggtgcctgcccaccccaagggcagggaccctgcatttcgaagacctgggc
tccaaaccctccgggggagctgagggggctggaattacggtctttaagtaccacgcatta
atcgccttccctggcaactgcagtttccatggaaaatgccggctctgcccccggcagctc
cgcagcgtctggcagagcccggcgctgctcagcgcgggttttacacctcgcagggcggcc
agactggccccttgggccacctgcggcgtgtgggccgagcgcgactcggacgaggagcgg
cccagcttcggcggcaagcgctccagggactactcggcccccgtgaacttcatcagtgct
gggctgaaaaagtcagcagcagaggagatgtctgaggaggactctgatgaggatgagaag
cccgtgaagcaggaagaagtccccaaggagtttgtgccaaagaagttaaaaacaggtggt
aactttaagcccagccagaagggctttgtaggagggacaaaatctttcatggattttggc
agctgggagagacacacgaagggaattgggcagaagcttctccagaagatgggttatgtc
ccaggaagaggtctggggaagaatgctcaaggaatcatcaaccccatcgaggccaagcag
aggaaaggcaaaggggccgtcggtgcctacggctccgagaggaccagccagtctctgcag
gacttccctgttgtggactcggaggaagaagctgaggaggaatttcagaaggagctcagc
cagtggaggaaggaccctaatggaggcaagaagaagcccaaatacagctacaagacagtg
gaagaactgaaagccaagggcaggatcaacaagaagctttcagcccctcagaaggagatc
tcccaagtcaaggtgatagacatgacgggccgggagcagaaggtgtattacagctacagc
cagatcagccacaagcacaacatcccggacgacagcccccagcagccgcccggcaaggac
gccaaggcccagggctttgccctgcccgagctggagcacaacctgcagctcctcatcgac
ctgacggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtg
gtcaacctgacccacgagatacagaagatgtctgaagtcctctcgcacgaggagaaggcg
atcggcaacctcagcaaggtgctggagatggtggaggagtgtgagagacggatgcagccc
ggctgtgagaaccccctgaccctggatgagtgtgccaagatctttgagacccttcaagac
aagtactacgaggagtacaggatgtctgacagggtcgacctggccgtggccatcgtctac
cctctcatgaaggattacttcaaaaactgggatcccctcaaggactgtacatatggcaca
gagatcatagccaagtggaagagccttttggaaaacgaccagctgttatcacacagtggg
caggacctgtcaacagatgcttttcacagactgatgtgggaaatctggatgccttatgtc
agaaacattgtggctcagtggcaacccaggaactgtgggtccatggtggatttcttggat
agctgggttaccgctgttcccgtctggatactagataacattctggatcagctcatcttc
cccaagctgcagaaagaggtagaaaactggaatcccctgacagacacagtccccatccac
tcctggatccacccctggctgcccctgatgcaggcgcggctggggccgcccccctccccg
atccgcaacaagctggccaacgccctgcagaagtggcaccccagtgactcctctgccaag
ctcatcctgcagccctggaaggaggtgttcacacctggctcctgggaggctttcatggtc
aaaaacatcgtccctaaactcgggatgtgtttgaatgaactcatcataaaccctcaccag
cagcacatggatgctttctactgggtggttgactgggaggggatgatttctgtctccagt
cttgttgggctgctggagaaacacttcttccccaagtggctgcaggtgctgtgctcttgg
ctcagtaacagccccaattatgaagaaattaccaagtggtacttgggttggaagtccatg
ttctcagaccaagtgttagcacatccttcaatcaaagacaaatttaatgaagctcttgat
atcatgaaccgggctgtctcctccagcgtgggcgggtacatgcagccgggcgcgcgggag
aacatcgcgtacctgacgcacacggagcgccggaaggatttccagtacgaggcgatgcag
gagcggcgggaggccgagaacatggcccagcgcggcatcggcgcggccgccagctccgtg
cccatgaacttcaaggacctgatccagaccaaggcagaggagcacaacatcgtcttcatg
cccgtgatcgggaagcggcacgaggggaagcagctctacaccttcgggaggatcgtcatc
tacatcgaccggggcgtggtgtttgtgcagggagagaagacctgggtgcccacctccctc
cagagcctcatcgacatggccaagtga
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