Chaetura pelagica (chimney swift): 104388082
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Entry
104388082 CDS
T08631
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104388082 (TMF1)
Membrane trafficking [BR:
cpea04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104388082 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
SlyX
ATG16
DUF3450
Motif
Other DBs
NCBI-GeneID:
104388082
NCBI-ProteinID:
XP_009995203
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEESPWPDAVIPDYGDGTNSLISGGWDTS
SWGLSSNTEPQNQPVSPTAITKPVRRTVVDESENFFSAFLSPTEVQSIQKNSVVSKPPAK
SQRPKEEVKSTLKESQHPSQLEVPVTTEAEVKDPSVAGLVDLKNLDIPKEKLEENSVLES
DAKHEESTNEVTDKKVSALNLEVPEDALNEKCSPGGAGTGGAPGSTSQPLHTGTKEVGLE
TKERKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHL
MQTSFQLLSTSACADYNRLDDFQKMTESCGSSDAFERIDSFSVQSLDSRSVSEINSDDEL
SGRAPASASVAVSASAPKAEVVDALKNKSENSSDAPVVPAEEAEMEESGRSATPVNSEQP
DVLVATVQTVEEQIVKEETEPQQDAVEKVVEEDTEKQELNKVIDSLTEKLEKREIQLLST
SKEKARLEEAYDNLKDEMFRMKEESSSLSSLKEEFAQRIADAEKKLQLACKERDAARKEV
KTVKEELATRLNSNETAELLKEKEEQIKGLMEEGEKLSKQQLHNSNIIKKLRAKEKEREN
INAKQNKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEKDLTKLQAEVED
LEERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQDEAR
QQQEALAIQVADLRLALQRAEQQAARKEDYLRQEISELQQRLQEAESRNQELSQSVTSAT
RPLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELLSNKIQM
SSTESQNSLLRQENTRLQAQLEVERNRLKKMENENSRYEVELEGLKDEYAKTLEEAKKEK
TLLATQLEMEKMKVEQERKKAIFVQEAAKEKDRKPFPVDTVSSTPTMSRSSSISGVDMAG
LQTSFLSQDDPHDHSFGPVATSGSNLYDAIRMGAGSSIIENLQSQLKLREGEISHLQLEI
GNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKFRAQLKDLDQRYNTILQMYGEKAEEAE
ELRLDLEDVKNMYKTQIDELLKQRQT
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcttcgcagctttccagcttcgccaagcaggcgctgtcgcaggcc
cagaagtccatcgaccgggtgctggacatccaggccgaggagagcccttggcccgacgcc
gtcatccccgactacggcgacggaacaaactccctcataagtggaggatgggatacatct
tcctggggcttaagttcaaatacagaaccacagaaccagcctgtatcaccaacagcaatc
actaagccagtgaggaggacggtagtagatgaatctgagaacttcttcagtgcctttctc
tccccgacggaggttcagagtatccagaagaactcagtggtgtccaaacctccagccaaa
tcacagcgacccaaagaggaggtgaaaagcactttaaaggagtcccagcaccccagtcag
ctggaagtaccagtgacaacagaggcagaagtgaaggatccctctgtagctggcctagtg
gacttgaaaaaccttgatattcccaaggagaaattagaagagaattctgtgcttgaatct
gatgccaagcatgaagaaagcacaaatgaagttactgacaaaaaggtgtctgctctaaat
ttggaagtacctgaagatgctcttaatgaaaaatgcagcccaggaggggctgggacagga
ggtgcaccaggcagcacctcccagcctctccacacaggtacaaaggaagtgggtttggaa
actaaggagcgaaagactgaggacaggcaaagcaatacaccctcacctccaattagcact
ttctcctcggggacatccacaacgagtgacattgaagttctggaccatgaaagtgtcata
agtgagagctcagtaagttcaagacaggaagctgcagattcaaaatccagtcttcatcta
atgcagacatcgtttcagcttttgtctacatcggcctgcgcagattataatcgtttagat
gactttcaaaaaatgactgagagctgtggctcctctgatgcttttgaaagaattgattca
tttagtgtccagtctttggatagcagaagtgtgagtgaaataaattcagatgatgagtta
tcaggcagggctcctgcttcagcatctgtcgccgtcagtgcttctgcgccaaaggcagaa
gtggttgatgctctgaaaaataaatctgaaaactcgagtgatgctcctgttgtacctgct
gaggaagcagagatggaggagagtgggagaagtgcaacccctgttaattctgagcagcca
gatgttctggttgctactgtgcaaactgttgaagagcagattgtaaaagaggagactgag
ccccagcaggatgctgttgaaaaagtggtagaagaggacactgaaaagcaagagcttaac
aaggtcattgattcattaactgagaagctggagaagagggaaatacagttattaagcact
agtaaagaaaaggcacgcctggaagaagcttatgataacctcaaagatgaaatgtttaga
atgaaagaagagagcagtagcctttcctctcttaaagaggagtttgctcagaggattgcg
gatgctgagaagaagctccagctggcctgcaaggaaagggatgcagctagaaaggaagta
aagactgttaaagaagaattggctactagacttaatagtaatgaaactgctgaattactg
aaagaaaaagaagagcaaatcaaaggattaatggaggaaggagaaaagctttccaaacag
cagctgcataattccaacattattaagaaattaagggccaaggagaaagagagagaaaat
attaatgcaaaacagaacaaaaagattaaagaattggaagaggagttgcagcatttaaaa
caggtgcttgatggcaaggaagacctggagaagcagcatcgagacagcattaagcaactg
aacagtgttgtagagagacaagaaaaggatcttactaaacttcaggcagaagtggaagac
cttgaagaacgcaacagaagtgtccaggcagcacttgacagtgcatacaaggaacttgca
gatcttcataaagctaatgctacaaaggacagtgaggcacaagaagcagccctcagtcgg
gagatgaaggcaaaggaagagcttgggttagctctggagaaggcccaggacgaggcacgg
cagcagcaagaggctttggcaattcaggtggcagacctgaggctggcactgcagcgtgcg
gagcagcaggcagcaagaaaggaagactatttacgccaggaaatcagcgaactacagcag
agactgcaggaagcagagagccggaaccaagagctaagtcagagtgttacatctgccaca
cggcccctgctccggcagatagaaaatctgcaagccacactgggagcacagacctctgct
tgggaaaaattggaaaagaacctttctgacaggcttggtgagtctcaaactcttctagca
gcagctgctgagagagaacgggctgctacagaagaacttctttctaataaaattcagatg
tcttctactgagtctcagaatagtcttttaaggcaagaaaatacacgccttcaggctcag
ctagaagtggagaggaacagattgaaaaaaatggagaatgaaaatagtaggtacgaggtt
gaactagaaggactcaaagatgagtatgcaaaaaccttggaagaggcaaagaaagaaaag
acattgctagctactcagctagaaatggaaaagatgaaggttgaacaagaaagaaagaag
gcaatttttgtgcaagaagcagcaaaggagaaggatcggaagccctttccagttgacact
gtttcaagtactccaacgatgtcacgctccagttccataagtggagttgatatggcaggt
cttcagacatctttcctttcacaggatgatcctcatgatcactcatttgggccagtagct
actagtggaagcaatctttatgatgccataaggatgggagcaggttcaagtataattgaa
aacctccaatcacagctaaagttaagagaaggagagatttcacatctacagctggaaatc
ggaaacctggagaaaactcgatcaataatggcagaggagctggttaaattaacaaatcaa
aatgatgaacttgaagaaaaagtgaaggaaatccccaaattccgggcacagttaaaggat
ttggatcaaagatacaacacaattcttcagatgtatggagagaaagcagaagaagctgaa
gaactccgactggatctggaagatgtgaaaaacatgtacaagactcagatagatgaactt
ctaaaacaaagacaaacttaa
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