Chaetura pelagica (chimney swift): 104388103
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Entry
104388103 CDS
T08631
Symbol
VPRBP
Name
(RefSeq) protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpea01001
]
104388103 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104388103 (VPRBP)
Enzymes [BR:
cpea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104388103 (VPRBP)
Protein kinases [BR:
cpea01001
]
Serine/threonine kinases: Other
Other
104388103 (VPRBP)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104388103 (VPRBP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mahjong_helical
DCAF1_helical
DCAF1_N
DCAF1_4th
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104388103
NCBI-ProteinID:
XP_009995228
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVTILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKHENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVSGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHTSVGSTTTSVHAQARPPASQGPLALPGPSYANTSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQDDEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctggacatgtagactccaaggctgagctcacggctttgcttgagcaa
tgggagaaagaacatggcagtgggcaagacatggtcactattctcaccagaatgtccgag
ctgattgagaaggaaactgaagagtatcgcaaaggggatccagacccgttcgatgaccga
cacccaggtcgagcagaccctgagtgcatgcttggtcacttgctgaggatacttttcaag
aacgatgatttcatgaatgcgctagtgaacgcttatgtgatgacaagcagagaacctccg
ttaaacactgctgcctgccgacttcttctggacatcatgccagggctggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcacgagaggctgat
cagccactaagaacatatgcaacaggactgttaggtggagctatggaaaaccaggatatt
gctgcaaactacagggatgagaactcacaattggtggctttggtgcttcgacggctacga
gagttacaggttacagaaatgactacaaaacatgaaaacaagcgtcccagccctcggaaa
gtgccatcagatcctctgctgcctctcgatgaagaggctgtggatatggattatggggag
atggcagtagatggagagcaagaggaagtttctggtgatatggagatctcctttcatctc
gattcaagtcacaagaccagtagcagagtaaactctgctacaaagctagatgatggggga
ctgaggaaaagcaaatcagggaaacagcatgaaagagatggcttccggaaggccaagcag
aagctgggcttctctgcctcagagccagagcggatgtttgttgaactgtctaacagcagc
tggtcagaaatgtccccgtgggtgattggcactaattatacactttaccctttgactcct
gccatagagcagaggctaattcttcagtatctgactcctctaggggagtaccaagagctg
ctacccatctttatgcaactggggtcaagggagctgatgatgtactacatcgatttgaag
cgaaccaacgatgtgctgctcacttttgaagcccttaagcatttggcatcattgctgctg
cacaacaagtttgcaacagagtttgttgctcatggaggagtgcaaaagttgctggagatt
ccacgtccttctatggcagcaactggagtctcaatgtgtttatattatttgtcttacaat
caagatgccatggagagggtttgcatgcacccccataatgtactttcagatgtagtaaac
tacaccttgtggctaatggagtgctcccacgcctcaggctgctgccatgctactatgttc
ttctccatttgcttctccttccgtgctgtcctggagctttttgacaggcatgatggcctt
cggcgactggttaacctgataagcacacttgagatcttaaacctggaagaccaaggagcc
ctcttgagtgatgatgagatctttgccagccggcagactgggaaacacacctgcatggcc
ctgcgtaggtactttgaggctcaccttgctatcaaactggagcaggtgaagcaatcactg
cagcgcactgaaggtggcattctggtccatccgcagcccccctacaaggcctgttcgtat
actcatgagcagattgtagagatgatggagttcctgattgagtatggcccagcacagctt
tactgggagccagcagaagtttttctcaaattgtcttgtgtccagctcatgcttcagctc
atttcaatagcatgcaactggaagacgtactatgcaaggaatgacacagtacgatatgct
ttggatgtactagccatcctcactgtggttcctaaaatccagttgcagttggcagaatct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagtattatcctt
ggagttgctgaaggtgaatttttcatccatgatgctgagattcagaaatcagcccttcag
atcatcatcaattgcgtttgtgggccagataatcggatctccagtattggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggctcccaagagcagtgagcatacgttagct
aagatgtggaatgtggtgcagtccaacaatggcatcaaagtgctgctgtcactgctgtcc
ataaaaatgccaatcacagatgcggaccagatccgagcactggcctgcaaggccttggtg
gggctctcacgcagcagtaccgtccggcagatcatcagcaagctgcccctcttcagcagc
tgccaaatacagcagctgatgaaggagccagtgctccaggacaagcgcagtgagcacgtg
aagttctgcaaatatgctgctgagctgatagagcgcgtctcggggaagccgctactgatc
ggcacggatgtctctctggctcggttgcagaaagcggatgtggtggcccagtcaaggatc
acgtttcctgagaaagagctgctgcttctgattcggaaccatctgatctctaagggtcta
ggagaaactgcatctgtcctcaccaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcacccctgtggcagctgctgcctcccctgtgaccctgcctcgcactcct
cgcatagctaatggaatctcagcccgtttgagtagtcatacttctgtaggttccaccacc
acctctgtccatgctcaggcaaggccgcctgcatcccaaggtccacttgcccttccaggc
ccttcttatgccaacacctctcctctgattggcagaattagctttgtcagggagaggcca
tctccctgcaacggcaggaaaattagagtgctgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccctccccgcccacgctg
gacagtataataacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacggc
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccaatatct
gtgttcagggaagcaaatgaggatgagagcggctttacctgttgcgcgttttctgcaaga
gaacgattcttaatgctgggaacttgcacggggcagttgaagctgtataatgtgttcagt
ggacaggaggaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatccttattgctgacatctgctacgtggagccagcctctgtctgcattgtgg
ggaatgaaatctgtctttgatatgaagcattccttccctgatgaccaatatgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagatattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcagcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gtttttcatcccaatgggctagaggttatagtcaacacagaaatttgggacctccgaact
ttccatttgttacacacggtacctgcactggatcagtgtcgtgtggtcttcaactatact
ggcacagtcatgtatggagctatgttgcaggcagatgatgaagatgaccttttggaggag
agaatgagaagtccctttggttcttctttcaggacatttaatgcaactgattataaacct
atagctaccatcgatgtgaagcggaatatctttgacttgtgcacagacagcaaggactgc
tacctggctgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactatatgaagtgggcaggcagcgcttggcagaagatgaagaggatgaagaggaagat
caggatgatgaagaacaagaagaggaagatgatgatgaagatgatgatgatacagatgac
ctcgatgaactagatacagaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaacgacttttctccctctgatgatgaggagcttgct
aacctcctcgaagaaggagatgagggtgaagatgaagattctgatgctgatgaggaagtt
gagctgattcttggagataccgacagctcggataactctgacttggaggacgacataatc
ctgtccctgaatgagtga
DBGET
integrated database retrieval system
