Chaetura pelagica (chimney swift): 104388172
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Entry
104388172 CDS
T08631
Symbol
USP19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104388172 (USP19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104388172 (USP19)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104388172 (USP19)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104388172 (USP19)
Ubiquitin system [BR:
cpea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104388172 (USP19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
CS
zf-MYND
MYND_ZMYND11_ZMYD8
USP7_C2
Motif
Other DBs
NCBI-GeneID:
104388172
NCBI-ProteinID:
XP_009995300
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MSSSTNAPGQRRVSRGLDDATNKKKQKDRANQESKEVSRPELEQAETAQEKDSEEELLLD
WKQNADEIIVKLNLGSGALKVEDVDAAFSDRDCVVKLPDGRQWSCQFYEEIEGSCSKIQY
KKGNFLHLVLQKKIPLHTWSSLLKRRKDGSKELGKGATCWENGKEKAASAELAPEEPRAE
GAEPPRSRQEPSNPKRAPGRSEALGGKSPASPGTQSGPSAKRAVYLKGAHTEEELNARVT
GSVEPSKGHSGRAGGRRNGRASQVDVATALVDLTPPLEKAVALAKETVPMEMPPLTATTE
VFPHHVATCVEKRVLQPGSPAEALRGRDCTPVLGESSKAVPVATPPLGRDSEKRDWSKDD
VALEAAADKPEPFVSLTFVKNDSYEKGNDLVVVHVYVKEIDKETSKVLFREQDFTLVFQT
SDTNFLRLHPGCGPHTVFRWQVKLRNLIEPDQCTYNFTVSRIDVCLKKRQSQRWGGLEAP
ATRGAVGGAKVAMPTGPTPLDKNPPGSNQHPLSSKEEARASDKEKPRVEDGGLDGVAART
VPEHVAVKQEPHIPSPKPTCMVPPMTHSPVSTESVEDDEDEDEKKKVCLPGFTGLVNLGN
TCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRALWKGTHHA
FQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDE
VVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPVPLPQKQKVLT
VYYFAKEPHKKPIKFLVSISKENSSAMEVFDSVAHSVRVKPENLRLAEVIKNRFHRMFLP
SHSLDTVSPTDLLLCFEVLSPELAKERVVELQVQQRPQVPSGPVAKCAACQKKQLSEDDK
LKRCTRCYRVGYCNVACQKTHWPDHKASCRPENIGFPFLISVPESRLTYARLAQLLEGYA
RYSVSVFQPPFQLARMSPEQELQPLLPDKLEPLAKSSCAAATSVPELGDGDNRPSTLLQE
PPLSPAVPELHPELGDAGTVRSKVLAARSSLLSLDSGFSEHMESQGDSCCEKEPSYERAL
KPEAAIPGYQHTPDSLSARATPFYINKIDSANREHKLEDKGDTPLELTDDCSLALVWKNN
ERLKEYVLVESKELECVEDPGSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWSCPKCKQ
HREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGEQQ
LPMYDLYAVINHYGGMIGGHYTAYARLPNDKNSQRSDVGWRLFDDSTVTTVEESQVVTRY
AYVLFYRRRNSPVERPLPGHPPDHRSERTPSTEAAASQASLIWQELEAEEQELQLEAPQR
PARSSWRPCGQKHSPGTPQHPDEGCARYFVLATTAAIVALFLNVFYPLIYQTRWR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagtaccaatgcccctgggcagaggagagtgtctcggggcttggatgatgcc
accaacaagaagaagcagaaggatcgagccaaccaggagagcaaggaagtgtctcgcccc
gagctcgagcaggctgagactgcccaggagaaagactctgaggaggagctgctgctggac
tggaagcagaatgctgacgagatcatcgtcaagctgaacttgggcagtggagctctgaag
gtagaggatgtggatgctgctttcagtgacagggactgcgtggtcaaactaccagacggg
cgccagtggagctgtcagttctacgaggagattgaaggctcctgtagcaagatccagtac
aagaagggcaactttctacacctggtgcttcagaagaagatcccactccatacctggtct
tcgcttctgaagagaaggaaagatggatccaaagaactgggcaaaggggccacgtgctgg
gagaatgggaaggagaaggctgcttctgcagagctggcccccgaagagccaagggctgaa
ggtgcagagcctccgaggtcccggcaggagccctccaaccccaagcgtgccccgggaaga
agcgaggccctgggagggaaaagcccagccagcccagggacacagagtggccccagtgcc
aagcgggcagtgtacctcaaaggggctcacactgaagaggagctgaatgccagagtcacg
gggagcgtggagcccagcaaggggcacagcgggagggcaggcggccgccgcaacggcaga
gccagccaggtcgatgtggccacagccctggtggacctcacacccccgctggagaaggct
gtggctttggccaaggagactgttcccatggagatgccacctctcacggctaccacagag
gtgttcccccaccatgtagccacctgtgtggagaagagagtcctgcagccaggcagccct
gctgaggccttgcggggccgggactgcacgcctgtcctgggagagagctctaaggctgtc
ccagtggctacccctcccttgggcagagacagtgagaagagggactggtccaaggatgac
gtggctctggaagcagcagctgataagccagagccttttgtgagcctgacttttgtcaag
aatgactcgtatgagaagggcaacgacctggtggtagtgcatgtctatgtgaaggagatc
gacaaggaaacgtccaaggtgttgttccgggagcaagacttcacgctggtgttccagaca
agtgacacaaacttccttcgccttcatcctggctgtgggccccacacagtgttccggtgg
caggtgaagctcaggaaccttattgagccggaccagtgcacatacaacttcacggtgtct
cgcatcgacgtctgcctgaagaagcgccagagccagcgctggggggggctggaggctcct
gccactcgaggtgcagtgggtggtgcaaaggttgccatgcctacaggccctacccctctg
gacaagaatcctccgggcagtaaccagcaccccctgtccagcaaggaagaggcccgagcc
agtgacaaagagaagccacgtgtggaagatggaggtctggatggtgtggcagcccgtaca
gtcccagagcatgtggcagtgaagcaagagcctcacatcccctcgcccaaaccaacatgc
atggtgccaccaatgacacacagccctgtgagcactgagagtgtagaggacgatgaggat
gaggatgagaagaagaaggtgtgcctgcctggcttcacggggctggtgaacctgggtaac
acctgcttcatgaacagcgtcatccagtccctttccaacacccgggaactgcgtgactac
ttccatgatcggtcctttgagtcagaaatcaactacaacaaccctctggggacgggggga
cgcctggccatcggctttgccatgctgctgcgagcgctgtggaagggcacacaccatgcc
ttccagccctctaaactgaaggcaatcgtggccagcaaggccagccagttcactggctat
gcccagcatgatgctcaggagttcatggccttcctacttgatggcctgcatgaggacctc
aaccgcatccagaacaagccctacacagaaactgttgactcagatgggagacctgacgag
gtggtagctgaggaggcctggcagcgacataagatgaggaatgactcatttattgtggac
ctcttccagggccagtacaaatccaagctggtgtgcccagtgtgttccaaggtgtccatt
acctttgaccccttcctgtacctccccgtgcccctcccacagaagcagaaggtgctgact
gtctactactttgcaaaggaaccacacaagaaacccatcaagtttctcgtgagtatcagc
aaggagaactccagtgccatggaggtctttgactcagtggctcacagtgtgcgtgtgaaa
ccagagaacctgcgcctggcagaggtgatcaagaatcgcttccaccgcatgtttctgccg
tcccactcattggacactgtctctcccacggacttgctgctctgcttcgaggtgctgtcc
ccagagctggccaaggagcgggtggtggagctgcaggtccagcagcgtccgcaggtgccc
agcggccccgtcgccaagtgtgctgcctgccagaagaagcagctgtcagaggatgacaag
ctcaagcgctgcacgaggtgctatcgagtcggttactgcaacgtggcatgtcagaagaca
cactggccagaccacaaggcttcatgccgcccagagaacatcggtttccccttcctcatc
agcgtgcccgagtcccgcctcacctacgctcgcctggcccagctgctggagggctatgca
aggtactcagtcagtgtgttccagcctccattccagctggcccggatgtcaccagagcag
gagctgcagcctctcctcccagacaagttggagcccttggccaagagcagctgtgcagca
gccacctctgtccctgagctgggggatggggacaacaggccttccactctcctgcaggag
cccccactctcaccagctgtgcctgagctgcaccctgagctgggggatgctggcactgtc
cggagcaaggtcctggcagccagaagttccctgctgagcttggattcaggcttctctgag
cacatggagtcgcagggcgacagctgttgtgagaaagagccgtcctatgagagagccctc
aagccagaagctgccatccctgggtaccagcacactccagactcgctgagtgcccgtgcc
acgccgttctacatcaacaagatcgacagtgccaaccgagagcacaagctggaagataaa
ggtgatactcccctggagctgacagatgactgttctcttgcactggtgtggaagaacaat
gagcgcctcaaggagtatgttttggtggagtccaaggagctggagtgcgtggaggacccg
ggctcggccagtgaagcagcccgggctgggcacttcaccctggagcagtgcctcaatctc
ttcactaagcccgaagtcctggccccggaggaagcgtggtcctgccccaagtgcaagcag
caccgtgaggcctccaagcagctgatgctctggcggttgcccaatgtcctcatcatccag
ctcaagcgcttctccttccgtagctttatttggagggacaagatcaatgacatggtggat
ttccccgtccggagcttggacctgagcaagttctgcatcggccgaaagggtgagcagcag
ctgcctatgtatgacctgtacgctgtgatcaaccactacgggggcatgattggggggcac
tacacagcgtatgcccgcctgcccaacgacaagaacagccagcgcagcgacgtgggctgg
cggctctttgatgacagcacagtcaccaccgtggaggagagccaggtggtaaccagatac
gcgtatgtcctcttctaccgtcggaggaactctcctgtggagagacccctgcccgggcac
cccccagaccaccgctccgagcgcaccccctctaccgaagctgctgccagccaggcttct
ctgatctggcaggaactggaggctgaagaacaagaactgcaacttgaggctcctcaaagg
cctgcaagaagctcctggaggccctgtggccagaagcatagtccaggcaccccccagcac
ccagatgaaggctgcgccagatactttgtcctggccactacagccgcaattgtggctctc
ttcctgaatgtcttctaccctctcatttaccaaacccgctggagatag
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