KEGG   Chaetura pelagica (chimney swift): 104388310
Entry
104388310         CDS       T08631                                 
Name
(RefSeq) nyctalopin-like
  KO
K08129  nyctalopin
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cpea00535]
    104388310
Proteoglycans [BR:cpea00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    104388310
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRR_1 LRR_14 LRR_9 LRR_NXF1-5 LRRNT LRR_EndoS LRR_R13L1-DRL21
Other DBs
NCBI-GeneID: 104388310
NCBI-ProteinID: XP_009995473
LinkDB
Position
Unknown
AA seq 429 aa
MFFFVIFVFTCAAKAGLNLNISDSCPSMCKCAPEEITYCTRAGLRALPAEIAASTISLNL
SNNHLRSLTTTTFRNLTFLHSLWLDGNNLTFLSPGTFHALSKLRELHLSRSSRLTYLHAN
TFKGLINLISLDLSHCNIFEIHPLLFSHLPSLETLDLASNNMRYVPQAFRNLSSLTRLSL
EGNHIEAIGRDSLKDLETLYDLNLRKNRIWTIQNGAFTKLLRLGMLNLGHNFIADLPNQL
FDGLIQLKTMHLEANRITAVGCTFRHLLNLRNLYLNNNQISSISDSAFLYINKLHFLHLS
KNNLSSLPIRLFAELPKLKYVFLSQNPWKCDCKMLWFWRWTARHRGAIRGLHCAFLGPHN
TTALHFAHPGDLMDCTVPPELAGEDKCRLASTSTAPRTFSLPSKVILLALVCCTWYFARG
WDTQTFDRL
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgttcttttttgttatatttgtatttacttgtgcagccaaggctggactgaatctgaat
atctctgattcgtgcccaagcatgtgcaaatgtgcacctgaagagatcacctactgtacc
agagccgggctcagagccctccctgcagaaatagcagcatccaccatttctctaaacctc
tcaaataaccatttgcggagtctcaccaccaccaccttcagaaacctgactttcctccac
agcctctggctagatggaaacaacctgaccttcctgtccccggggaccttccacgctctc
agcaagctgcgagagctgcacctcagcaggagctcacgcctcacctacctgcatgcaaac
actttcaaaggactaataaacctcatcagcctggatttgtcccactgcaacatcttcgaa
atccacccacttctattttcacacctgccttctctagaaacacttgatttagcctccaat
aacatgcggtatgtcccacaagcctttaggaatctctccagcctcacaaggttgtcactg
gagggcaaccacatagaagccattggcagagattccttgaaggacctggaaaccctgtat
gatctgaatctcaggaagaatcggatatggaccattcaaaacggtgcttttacaaagctg
ctcagattgggcatgttaaatttaggacacaacttcattgctgatttgcctaatcagctt
tttgacgggttgatccagctcaagaccatgcaccttgaagccaacagaatcactgctgtc
ggctgcaccttcaggcatctgctgaacttgagaaacttgtacctgaacaacaaccagatc
tcctccatctcagactcggctttcttgtacataaacaagctgcacttccttcacctgagc
aagaacaacctcagctccctccccatccgcttgtttgccgaactcccaaaactgaagtac
gtgtttttatcccaaaacccctggaaatgtgactgcaagatgctgtggttctggaggtgg
acagcaaggcaccggggagccatcagagggctgcactgtgccttcctgggccctcacaac
accacagctcttcattttgcccacccaggggacctgatggactgcacggtgccacctgag
ctggcaggtgaagacaagtgcaggttggccagtaccagcacagctcccaggaccttctct
ctccccagcaaggtcatcctgctggcacttgtctgctgcacgtggtattttgcaagggga
tgggacacacaaacttttgataggctttaa

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