Chaetura pelagica (chimney swift): 104388310
Help
Entry
104388310 CDS
T08631
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpea00535
]
104388310
Proteoglycans [BR:
cpea00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
104388310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRR_NXF1-5
LRRNT
LRR_EndoS
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
104388310
NCBI-ProteinID:
XP_009995473
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MFFFVIFVFTCAAKAGLNLNISDSCPSMCKCAPEEITYCTRAGLRALPAEIAASTISLNL
SNNHLRSLTTTTFRNLTFLHSLWLDGNNLTFLSPGTFHALSKLRELHLSRSSRLTYLHAN
TFKGLINLISLDLSHCNIFEIHPLLFSHLPSLETLDLASNNMRYVPQAFRNLSSLTRLSL
EGNHIEAIGRDSLKDLETLYDLNLRKNRIWTIQNGAFTKLLRLGMLNLGHNFIADLPNQL
FDGLIQLKTMHLEANRITAVGCTFRHLLNLRNLYLNNNQISSISDSAFLYINKLHFLHLS
KNNLSSLPIRLFAELPKLKYVFLSQNPWKCDCKMLWFWRWTARHRGAIRGLHCAFLGPHN
TTALHFAHPGDLMDCTVPPELAGEDKCRLASTSTAPRTFSLPSKVILLALVCCTWYFARG
WDTQTFDRL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttcttttttgttatatttgtatttacttgtgcagccaaggctggactgaatctgaat
atctctgattcgtgcccaagcatgtgcaaatgtgcacctgaagagatcacctactgtacc
agagccgggctcagagccctccctgcagaaatagcagcatccaccatttctctaaacctc
tcaaataaccatttgcggagtctcaccaccaccaccttcagaaacctgactttcctccac
agcctctggctagatggaaacaacctgaccttcctgtccccggggaccttccacgctctc
agcaagctgcgagagctgcacctcagcaggagctcacgcctcacctacctgcatgcaaac
actttcaaaggactaataaacctcatcagcctggatttgtcccactgcaacatcttcgaa
atccacccacttctattttcacacctgccttctctagaaacacttgatttagcctccaat
aacatgcggtatgtcccacaagcctttaggaatctctccagcctcacaaggttgtcactg
gagggcaaccacatagaagccattggcagagattccttgaaggacctggaaaccctgtat
gatctgaatctcaggaagaatcggatatggaccattcaaaacggtgcttttacaaagctg
ctcagattgggcatgttaaatttaggacacaacttcattgctgatttgcctaatcagctt
tttgacgggttgatccagctcaagaccatgcaccttgaagccaacagaatcactgctgtc
ggctgcaccttcaggcatctgctgaacttgagaaacttgtacctgaacaacaaccagatc
tcctccatctcagactcggctttcttgtacataaacaagctgcacttccttcacctgagc
aagaacaacctcagctccctccccatccgcttgtttgccgaactcccaaaactgaagtac
gtgtttttatcccaaaacccctggaaatgtgactgcaagatgctgtggttctggaggtgg
acagcaaggcaccggggagccatcagagggctgcactgtgccttcctgggccctcacaac
accacagctcttcattttgcccacccaggggacctgatggactgcacggtgccacctgag
ctggcaggtgaagacaagtgcaggttggccagtaccagcacagctcccaggaccttctct
ctccccagcaaggtcatcctgctggcacttgtctgctgcacgtggtattttgcaagggga
tgggacacacaaacttttgataggctttaa
DBGET
integrated database retrieval system