Chaetura pelagica (chimney swift): 104388368 Help Entry 104388368         CDS       T08631                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea03013   Nucleocytoplasmic transport cpea03040   Spliceosome Brite KEGG Orthology (KO) [BR:cpea00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104388368 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     104388368 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cpea03019]     104388368 (THOC2)    03041 Spliceosome [BR:cpea03041]     104388368 (THOC2) Messenger RNA biogenesis [BR:cpea03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      104388368 (THOC2) Spliceosome [BR:cpea03041]  Complex C   Other components    EJC/TREX     104388368 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     104388368 (THOC2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  104388368 NCBI-ProteinID:  XP_009995530 LinkDB All DBs Position Unknown AA seq 1572 aa AA seqDB search MAVQLCRSLSENKSHDSMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDMPS ILADVFCILDIETSCLEEKSKRDYFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQ QFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGC FNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSGET PSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSSEK TEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIAVA LCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGPHL SHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDCNA CMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVK PSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALAN PEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEV VQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPL CLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDV LCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHD AVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPN KKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCI FPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRF LCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHY KLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDL YALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTVRLE EGTTEETDKLKEKSQGMVKVINKAVNATPKVTTSNGNSGSNSKIIKEKDEKEKSGKEKDK EKKDKTPAATPEMKALGKDGKDKPKEERVNKDEKAREIKEKTPKSDKEKEKVKKEEKASK EEKSKTIVTIVESKSTAEKEREKEPSRERDIAKEMKSKENTKGGEKMPVAGSLKSPVPRS EISESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKEREVDKK DLDKSRERSREREKKDEKDRKERKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESP SDSPRLTEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTG GKEEKKQYPLTH NT seq 4719 nt NT seq  +upstreamnt  +downstreamnt atggctgtgcaactgtgtcgcagtctcagtgaaaacaagagccatgatagtatgggtttc agagatatccaacaggctttgtatgagctggcataccatgttgtcagaggaaacctgaag cacgatcaagcctctaatgttcttggtgatgtcatagaattccgggaagacatgccttcc atcctagctgatgtattctgcatactagatattgaaacaagctgtttagaagaaaaaagt aagagggattattttacccaactggtattagcctgtttgtatcttgtatcggacactgtc ttaaaggagcgtttagatccagagacactggagtcattaggacttatcaagcagtctcaa cagttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacagaagttt aatttgttaagagaggagaatgaaggttatgcaaagctcatcgcagaacttggacaagac ttatctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgt tttaaccttgatcccaaccgagttttggatattatcctagaagtctatgagtgcaggcct gagtatgatgacttctttgtaccactgattgagtcttacatgtacatgtgtgaacctcaa actctatgccacatccttgggttcaaattcaagttttatcaggatccaagtggtgagaca ccttcatccctatacagagttgctgctgtgcttctgcaacataatcttatagacctagaa gatctctatgttcatcttcttccaggggataatgccatcattgaggaacacaagcgagag atagtggaagccaagcaaattgtcagaaaacttacaatggttgtcttatcctctgaaaag actgaggaaaaggagaaggaaaaagaaaaagaggaggagaaaactgaaaagcctcctgat aatcaaaagcttggtttattggaagctttattaaaaattggtgattggcaacatgcacaa agtattatggatcagatgcctccattttatgctacttcacacaagcctattgcagttgct ctttgccagcttgtacatgtgacaattgaacctctgtaccgcagagttggtgtacctaaa ggagcaaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaagcagat agctttgaggacttgagaaaggaagtgttcaacatgctttgttacctcggtcctcatctc tcccatgatcccattttatttgcaaaagtggttcgtctcggaaaagcctttatgaaagag tttcagtctgatggcagcaaacaagaagataaagagaaaatggagatcctgtttagctgt ttgttgagtattacagatcaagtcttgcttccatctctttctttgatggactgcaatgca tgcatgtctgaagaattatggggaatgttcaaaacttttccataccagtacaggtaccga ctttatggacaatggaagaatgaaacatacaatagtcatccacttctagtgaaagttaaa gctcaaaccatagacagagccaaatacatcatgaagcgtttaactaaggaaaatgtgaag ccctctggaagacaaattgggaagctcagccacagcaatcctacaattttgtttgattat attttatcacaaatacaaaaatacgataacttaataactccagttgttgattcactgaaa tacctcacttcgctgaactacgatgtcttggcatactgtatcattgaagctctggcaaac cctgagaaggagagaatgaagcatgatgacactacaatctcaagctggctgcagagtctg gctagcttttgtggtgcagttttccgaaaatacccaattgagcttgctggtctacttcag tatgtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaagaggta gtacagaaaatggcaggaatagaaattacagaagaaatgacaatggaacaattggaagcc atgactggtggagaacaactaaaagctgagggtggatactttggccaaatcaggaataca aaaaagtcttcacagagattaaaagatgcattattggaccatgatcttgcccttccgctg tgcctgcttatggctcaacagagaaatggtgtgatctttcaagagggaggggaaaaacat ctgaagctggtgggaaaactgtatgatcagtgccacgacaccctggtacaatttggtgga tttttagcatccaatctaagcacagaggattacattaagcgagtgccttctattgatgtt ctctgcaatgagtttcacacacctcatgatgctgcatttttcctctcaaggcccatgtat gcacaccatatttcatcaaagtatgatgaactaaaaaaagctgagaagggaaataaacag cagcacaaagttcacaaatacattacatcgtgtgagctggtgatggctccagttcatgat gctgtgatttctctgcaccttcccaaggtttgggatgacatcagtcctcagttttatgct acattctggtctttgacaatgtatgaccttgctgtcccacatagtagctatgacagagaa gtcaataaactgaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaat aaaaagaaaaaagaaaaagaacgttgcacagctctgcaggacaagcttcttgaggaggag aagaagcagttggagcatgtgcagagagttctacagagactgaaactagagaaggataac tggcttctggcaaagtctaccaaaaatgagactatcacaaaatttttacagttatgtata tttcctcgatgcatattttcggcgatcgatgcagtttattgtgctcactttgtagaactg gtgcatcagcagaaaacacccaacttctccacacttctctgctatgacagagttttctct gatattatatatacagttgcaagttgcactgaaaatgaagctagtagatatggcaggttt ttatgctgtatgctggaaactgtgactagatggcacagtgacagagtcatatatgaaaag gaatgtggcaactatccaggcttcctaactatattacgagcaactggatttgatggtgga aataaagctgatcaattggactatgagaattttagacacgtggtacacaagtggcactat aaattaactaaggcttctgtgcactgccttgaaacaggtgaatacacacacatcagaaat atcctgattgttctgaccaaaatccttccgtggtatccgaaagtgctgaacctgggccaa gccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacctgatcta tatgcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatgatacct gaaaatgaattccaccacaaagacccacctgccaggaatgctgtcgctgcaacagtacaa aatgggccaggtggtgctgggatgcctacatctctcacaataaatacagttagactggaa gaaggcactactgaggagactgataaactaaaggagaagtctcagggtatggtgaaagtt attaataaagctgtcaatgctacaccaaaggtgacaacaagcaatggaaacagtggttct aatagcaaaatcattaaagaaaaagatgagaaagaaaaaagcgggaaggaaaaagataaa gaaaagaaagacaagactccagctgccactccagagatgaaggcacttgggaaggatggg aaagataaaccaaaggaagaacgggtaaacaaagatgagaaagcaagagagatcaaggag aaaacgccgaaatctgacaaggagaaggaaaaagtcaagaaagaagaaaaagcttcaaaa gaagaaaaatccaagacaattgttaccatcgttgaatcaaagtcaactgcagaaaaggag agagaaaaggagccatccagagaaagagatatagcaaaggaaatgaaatccaaggaaaat actaaaggaggagaaaagatgccagtagctgggtccttgaagtcacctgttccccgatca gaaatatcagaatctgaaagggaacaaaaacgccgcaaagttgatactcattcttctcca tcacattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcac tacattaaccacactactccaacactgtccaagagtaaggagagagaagtggacaagaaa gatttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacagg aaagaacgaaaaagggatcattcaaacagtgaccgagaggtaccgcaggattcgactaag cgacgcaaagaggaaaatgggacaactggttcttcaaaacacagcaagagtgaaagtcct tctgattcccctcgcttaactgaaaaggagaaggagaagaacaaatcaaaatcttcagga aaagagaaaggtgattcaattaaagcagaaaagatggagaagagctcctctggcagcaaa aaggaatctagacatgataaagaaaaaactgaaaagaaagaaaaacgagacagtactgga gggaaggaagaaaagaagcaatatcctttaacacattaa

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