Chaetura pelagica (chimney swift): 104388373 Help Entry 104388373         CDS       T08631                                  Symbol ATG4A Name (RefSeq) cysteine protease ATG4A   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea04136   Autophagy - other cpea04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:cpea00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104388373 (ATG4A)    04136 Autophagy - other     104388373 (ATG4A)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:cpea01002]     104388373 (ATG4A)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cpea04131]     104388373 (ATG4A)    03029 Mitochondrial biogenesis [BR:cpea03029]     104388373 (ATG4A) Peptidases and inhibitors [BR:cpea01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    104388373 (ATG4A) Membrane trafficking [BR:cpea04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     104388373 (ATG4A) Mitochondrial biogenesis [BR:cpea03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     104388373 (ATG4A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  104388373 NCBI-ProteinID:  XP_009995536 LinkDB All DBs Position Unknown AA seq 421 aa AA seqDB search MREWGWESRGDGGSAAAPGTDSSVFEEPVRSAILSRYENQITILSDYLEEFPETDEPVWI LGRQHHLNTDKSKFLLDISSRLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALI CRHLGRDWQWENHKKQPEEYHRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTV AQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCWSPPQSGSAHPHRGALGRNKSTAGF CPGWKPLLLVIPLRLGINHINPVYIGAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELI YLDPHTTQSFVDSEENGTVDDQSFHCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSL VQKEILKQQSLRMFELVQKHPPHWPPFIPPTKPEVTTTGAELIESTDKLFELEEEFEILS V NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atgcgggagtggggctgggagagccgcggggacgggggctcagctgctgcacctgggaca gactcttcagtctttgaagagcctgttcgctctgccattttatccaggtatgaaaaccaa atcactattttgtcagactacttagaagaattcccagaaactgatgagccagtgtggatt ctaggaaggcaacaccacctaaacacagacaaatctaagtttttgttggatataagttct cgtctctggtttacgtacagaagaaagttttcgcctattggaggcactggtccttcctcc gatgctggctgggggtgcatgctgcggtgtgggcagatgatgctggcacaagcactgatc tgcagacatttgggaagagattggcaatgggaaaaccacaaaaaacaaccagaagaatat catagaatcttacagtgctttctagacagaaaggattgctgttactccatccaccaaatg gctcagatgggtgttggagaggggaaatcaattggagaatggtttggaccaaatacagtt gctcaagtactgaagaagcttgctttatttgatgaatggaattcattagcagtttatgta tctatggacaatacagtggtcattgaagacatcaagaagatgtgctggtcccccccgcag agcggcagcgcccacccacacagaggcgctcttggccgaaacaagagcacagcaggattc tgcccaggctggaagcccctcttgctcgttatacctctgcgactggggataaaccacatc aatccagtgtatatcggtgcatttaaagaatgctttaagatgccacagtctttgggagca ttaggagggaaaccaaataatgcctattatttcataggatttctaggcaatgagctgata tatttggaccctcacaccactcaaagttttgttgattcagaagaaaatggcacagttgat gaccagagcttccactgccagcaagctccacacagaatgaagatcatgaatttggaccct tcggtagctttaggcttcttttgcaaagaagaatgtgattttgataactggtgtagtctt gtacaaaaggagattctaaagcaacagagtctacggatgtttgagctggtccagaagcat ccacctcactggcctcctttcatacctccaacaaagccagaagtgacaaccacaggagca gaactcattgaatctactgacaaactatttgaattggaagaagaatttgaaatcctgagt gtatga

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