KEGG   Chaetura pelagica (chimney swift): 104388421
Entry
104388421         CDS       T08631                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104388421 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpea03041]
    104388421 (SF3A1)
Spliceosome [BR:cpea03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104388421 (SF3A1)
 Complex B
    104388421 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    104388421 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 104388421
NCBI-ProteinID: XP_009995587
LinkDB
Position
Unknown
AA seq 768 aa
PEEESKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFL
NPNDPYHAYYRHKVSEFKEGKAQEPSAAVPKVMQQQQSAQQQLPQKVQAQVIQETVVPKE
PPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLF
NYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQVYYRVEWAKFQERERKKEEEEKE
KERVAYAQIDWHDFVVVETVDFQPSEQGNFPPPTTPEELGARILIQERYEKFGESEEVEM
EVESDEEDDKQEKTDEPPAQLDQDTQVQDMDEGSDDEDEGQKVPPPPETPMPPPLPPTPD
QVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRS
IREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGH
SGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIGPSKPNEIPQPPPPSSASNP
PASAQPITSVPRPPTMPPPVRAAVVAAVPVMPRPPMTSVVRLPPGSVIATPMPPIIHTPR
INVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPSPAPMPPVHPPPPMEDEPVSKKL
KSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQVLVFTLPLSDQVSVIKVKIH
EATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHLALKERGGRKK
NT seq 2307 nt   +upstreamnt  +downstreamnt
ccggaagaggagtcaaaagaggaagcagcaccagctaagcctgtggtaggaattatttac
cctcctccagaagtcaggaatattgttgacaagactgccagcttcgtagccagaaatggt
ccagaatttgaagctcgaattcgtcagaatgaaataaataaccccaagttcaatttcttg
aaccccaatgacccttaccatgcctactaccggcacaaggtcagcgagttcaaagagggc
aaagcccaggagccctcggctgctgttcccaaggtcatgcagcagcagcaaagtgctcag
cagcagcttccccagaaggtgcaggcccaggtgatccaggagacagttgttccaaaggag
ccacctccagagttcgagttcatcgcggatcctccctccatctcagcctttgacctggac
gtggtgaagctcacggcgcagttcgtggctcgcaatgggcggcagttcctgactcagttg
atgcagaaggagcagaggaactaccagtttgacttccttcgcccccagcacagcctcttc
aactacttcactaagctggttgagcagtacacaaagatcctgatcccaccaaaaggctta
cttctcaaactcaagaaagaggctgaaaatcccaaggaagtcctagaccaggtgtattac
agagtggagtgggcaaagttccaggagcgagagagaaagaaggaagaggaggagaaggaa
aaggagcgtgttgcttatgcccagattgattggcatgactttgtggtcgtggaaacagtt
gacttccagcccagcgagcaagggaatttccctcctcccaccactccagaagagttggga
gctcgaatcctgattcaggagcgttatgagaagtttggagaaagtgaggaggtggagatg
gaggtggagtcagacgaggaagatgacaagcaagagaaaacagatgagcccccagcccag
ctggatcaagacacacaagtgcaggatatggatgagggctcagatgatgaagatgaaggt
cagaaggttcctcctcctccagaaaccccgatgccaccacctctgcctcccacgccggat
caggtcattgtgcggaaggattatgatcccaaagcctcaaaaccattgccacccgcccca
gctccggatgagtatcttgtttcccccatcactggagagaagattcctgccagtaaaatg
caggagcacatgcggatcggtctcctggatcctcggtggttggagcagcgggatcgctcc
atccgggagaagcaaagcgatgatgaggtctatgccccaggtctggatattgaaagcagc
ttgaagcagctggcagagcgccgtacagatatctttggtgtagaggagactgctattggt
aaaaagattggtgaggaagagatccagaaaccagaggaaaaggtgacctgggacgggcac
tcgggcagcatggcccgcacacaacaggctgctcaggccaatatcactctccaagagcaa
attgaagctatccataaggctaagggcctggtgccagaagatgacagcaaggagaagatc
ggccccagcaaacccaatgaaattccccagccacctcctccttcatctgcatcaaacccc
ccggccagtgctcagcccatcacctccgtccctcgtccacccaccatgccgcctcccgtc
cgcgccgctgttgttgccgccgttccggtcatgcctcgtccccccatgacctcggtggtg
cgtctgcccccggggtcagtcatagccacccccatgccccccatcatccacaccccccgc
atcaacgtggtccccatgccgccctccgcgccgcccatcatgagcccccgcccgccgccc
atgatcgtccccacagcatttgttcctgcacctcccgtggctccggtgccttccccagca
ccgatgcctcctgttcacccaccaccacccatggaggatgagccagtctccaagaaactg
aagagtgaggatagcttgattccagaggaggagtttctgcgccggaacaagggtccagtc
acagtcaaggtccaggttcccaacatgcaggacaagacagaatggaagctgaatggccag
gtgttggtgttcaccctgccgctctcggaccaggtgtctgttataaaggtgaagatccac
gaggccacagggatgccagctgggaaacagaagctgcagtatgagggcatcttcatcaag
gattcaaactccctggcctattacaacatgaccagtggctccctcattcacctggcactc
aaagaaagaggaggcagaaagaaatag

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