Chaetura pelagica (chimney swift): 104388522
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Entry
104388522 CDS
T08631
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
cpea
Chaetura pelagica (chimney swift)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
104388522
NCBI-ProteinID:
XP_009995698
LinkDB
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Position
Unknown
AA seq
618 aa
AA seq
DB search
MVPDAAALLVAAMVLGLRAAAGGGAGGYAQVKYMQPMVKGPLGPPFREGKGQYLDMPPLL
PMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGMHGQPGPAGPPGFSGIGKPGMPGLP
GKAGMKGMPGAKGEPGMRGEQGPRGLPGPPGLPGPAGISVNGKPGPRGGPGLPGFRGEPG
PKGEPGPRGERGMKGENGVGKPGLPGPRGNGGPPGPTGPPGPVGIGKPGLDGLPGAPGEK
GDMGPPGGPGVSGEPGPMGPRGPPGIDGIGIPGAAGVPGIQGPTGPKGEPGIRGLPGLPG
PTGHGKPGLPGLKGDRGQPGAPGAIGDKGEPGVDGEPGEPGPAGIIGPGVRGLTGSPGPK
GDGGIPGQPGLRGPSGIPGLQGPAGPMGPQGLPGLKGEPGLPGVPGEGKTGEPGMAGPIG
PPGMPGTPGLNGPPGPPGPPGPPGAPGVFDETGIAGLHLPDGGVEGAVLGNGKPGKPQYG
RGEISARIAPAFTAILTSPFPASGMPVKFDRTLYNGHNAYNPVTGIFTCPVSGIYYFAYH
VHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGSAVLELKENDQVWVQMPSDQANGL
YSTEYIHSSFSGFLLCPT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgccggacgccgcggcgctgctggtggcggcgatggtgctgggcctccgcgcggcg
gcgggaggtggcgcggggggctacgcccaggtgaagtacatgcagcccatggtgaaggga
cccctgggaccccccttccgcgaaggcaaagggcagtacctggacatgccaccactgctg
cctatggacctcaaaggggagccaggacccccagggaagcctggcccacgtggaccccct
ggcccccccggatacccaggaaagccaggcacgggaaagccaggaatgcatggccagcct
gggccagccgggccccctggcttctcaggcattgggaaacccggaatgccaggactccct
ggaaaggcgggtatgaaagggatgcctggagccaagggtgagcctggcatgcgaggagag
caagggccaagagggctgcccggccccccggggctgccggggccagctggcatctcagtc
aacgggaagccaggcccacggggtggccccggcctgcctgggtttcggggtgagcctggc
ccaaaaggagagccgggtccccgtggagagcgagggatgaagggcgagaatggtgtgggg
aagccagggctcccggggccccgggggaatgggggtcctcctggccccaccgggccccca
gggcctgttggcattggaaaacccggtcttgacggcctgccgggggcaccgggggagaag
ggggacatgggccctccaggtgggcctggtgtcagcggggagcccggccccatggggccc
cgcggccctcctggcatcgatgggatcggcatcccaggtgctgccggggtgccagggata
cagggccccacagggccaaagggagagcctgggatccgcggcctccctggtttgccaggc
ccaaccggacacgggaagccaggtttgcctggcctaaagggagaccgcgggcagcccggg
gcaccaggggccattggcgataagggggagcccggtgttgatggggagccaggcgagccg
ggccctgctggcatcattgggccaggggtgcgaggattaacgggcagccctgggccgaaa
ggggacggtgggatcccagggcagcctgggctgaggggcccctctggcatccctggctta
caaggacctgcaggtcccatggggcctcaggggttaccgggactgaaaggggagcccggg
cttcctggggttcccggtgaggggaaaaccggtgagcccggcatggccggacccatcggt
cccccgggaatgccaggaacaccagggctgaatgggccaccgggcccaccggggccgcct
gggcctccgggagcaccgggggtgttcgacgagacgggcattgcggggctgcacctgccg
gacggcggcgtggagggagctgtgctggggaacggcaaaccggggaagccacagtacggc
cggggagagatctccgcccggatcgcacctgccttcaccgccatcctcacctcccccttc
ccggcctcaggcatgccggtcaagtttgaccggactttgtataatgggcacaacgcctac
aacccggtcaccgggatattcacctgccctgtatccggcatctactattttgcctaccac
gtgcacgtcaaagggactaacgtttgggtggccctttacaagaacaacgtgcctgccacc
tacacctacgacgagtacaaaaagggctacctggaccaggcctcgggcagcgccgtgctt
gaactcaaggagaacgaccaagtctgggtacaaatgccctcggaccaggccaacggactg
tactccacggaatacatccactcctccttctccgggttcctgctctgccccacataa
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