Chaetura pelagica (chimney swift): 104388736
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Entry
104388736 CDS
T08631
Symbol
ARVCF
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome
KO
K28154
splicing regulator ARVCF
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104388736 (ARVCF)
Spliceosome [BR:
cpea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104388736 (ARVCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Atx10homo_assoc
Arm_2
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
104388736
NCBI-ProteinID:
XP_009995953
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MDDYDIRSAASILASVKEQEARFERLTRALEEGRRHXXXXLERANQPADRLSICNIGNGQ
PLATAWQQLVLQEQSPSNQTSIAMMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTR
RTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQA
SSTLTRSYNNYNDSYPESHEGQYRPYIGHDGYGDLSDNYGSLSRGVNYRPRYAYVPGNSY
RPDDGSFTLPSRRDNYGPVAQPQVPXNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPD
YSTVNRRTTAGVPERGRPHKGRGYDDPIETEMVEERIPYLHGGYAAPLAQPERGSMASID
RLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVR
HLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTND
MEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTT
VFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRN
LSYHVHKEVPGADKYQELDVSQTTSMGGSQKKKKDDAGCFGGKKAKEEWFNQGKKNGDLD
RNFDTLDLPKRSEAAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWMW
STYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMGELVRN
LPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRET
KAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKS
QDNEKAGSRDMIPMDELGPDGYSTIDHREKERKYKTSDNTGDASEKEPLKNDTNRKNINR
SNRASVNLVDARDIKPQPVDSWV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggatgactatgatatcaggtctgctgccagcattttagcatctgttaaggagcaagaa
gctcgtttcgagcggcttacccgtgcacttgaggaagggcggcgccacnnnnnnnnnnna
ctcgagcgtgccaatcagccagcagaccgactgagcatttgcaacattggcaatggtcag
ccactggcaaccgcctggcagcagcttgtactgcaggaacaaagccccagtaaccagaca
tcaatagcaatgatgcaagagcctcaagaaatggtggaagagacagttactgtggaggaa
gacccaggcactcccacttcccatgtgtctattgtcacttctgaagatggaaccacaagg
agaactgaaaccaaggttaccaaaatggtcaaaactgtcaccaccagaacagtgcgtcaa
gtgccgcttgggcctgatggcctgccatcaatggatggctcatctcctatgggcagctac
acagattccatagacagaaggtatatgaagaatggggagcggtacatcacaccacaagca
tcctccacattaaccaggtcttacaacaactacaacgattcctaccctgaaagccatgaa
ggccagtatcgcccttatattggtcatgatggttatggagatctctctgataactatggc
agcttgtctcgtggtgtcaactaccgtcctcgctatgcctacgtgccaggaaacagttac
aggccagatgatggtagcttcactttgccaagcagaagggataactatggtcctgttgcc
cagcctcaggtgccnnnnaaccgctcccaaccagaacgcttccaaccagagccctatgga
ctggaagatgataaccgcagccttggagtagatgatgaagggtatgaactggatcctgat
tactccactgtgaaccggaggacaactgcaggtgtgccagagagagggagacctcacaaa
ggaaggggctacgatgaccccatcgagacagagatggttgaagagaggatcccttacctt
cacgggggctatgcagcaccgctggcacaaccagagagaggaagcatggccagtattgac
cgtctggggaagcgctccccctctattgacagcattcgtaaggacccgaggtggagggac
cctgacctccctgaagtaattgccatgctcagccaccccattgatcccgtcaagtcaaac
gccgcagcctacctgcagcacttgtgctatgagaatgataaaatcaaaaaggacgtgagg
catctcaaagggatacctatcttggtgggcctacttgatcatccaaagccggaggtccat
cggaaagcctgtggggctctcagaaacatctcctatgggaaggataatgaaaacaaggtg
gctataaagaactgtgatgggatccctgcattgatcagactattgcgaaaaacaaatgac
atggaagtcagagagctaattacaggcaccctgtggaacttgtcctcctatgagcccctg
aagatggtcatcatcaaccatggtctgcagacacttaccaacgaggtgattataccccat
tcaggttgggagagtgagccaaatgaggactccaagcctcgtgatgctgagtggacaact
gtcttcaagaacacttctggttgcttacggaatgtaagttcagatggagcagaagcacgt
agaagactaagagagtgtgacggcttggtggatgccctccttcatgccctacagtctgca
gttggcaagaaggatacagacaacaagtctgtggagaactgtgtgtgcatcatgcggaac
ctttcctatcatgtccacaaagaggtccccggagctgataagtaccaagagctagatgtc
agccagactacaagcatgggaggctctcagaagaagaagaaagatgatgctggttgtttc
ggtggaaagaaagctaaagaggagtggttcaatcaaggaaagaagaatggagatttggac
cgaaattttgatacacttgatttgcctaagcggtctgaagcagcaaaaggctttgaatta
ctttaccagccagatgtggttcgactgtacctgtccatcctcaccgaaagtcagaacttc
aacactctggaagctgcagcaggggctttgcagaatctcagtgctggcaactggatgtgg
tccacatacatccgtgcaacagtgcggaaggagagaggcttaccagtgctagtggagctg
ctccagtctgactctgacaaggttgtgagggctgtgtcaattgctctgagaaacctctcc
atggatcgtcgcaataaagaccttataggtagttatgccatgggtgagctggtaagaaat
ttgcccagcaggcagcagagatctgcaaagaacctggaagaggatacggtggttgcagtg
ctgaacaccatccatgaaatcattactgacagctcagaaaatgcaaggtctctgatccag
acacagggcattcagaagctggtcgctatcagcaagtcgagccagtctcccagagaaaca
aaagcagcatctcacgttcttcagatgatctggagctataaagaactacgaaacgccctg
cagaaagatgggtggaacaagtcacacttccagtctgtttctgcaactccaaagagttcc
aaaggtactgctggcaggtctggctatgacgacagcactctgcctctggtggataaaagt
caagataatgagaaggctgggagtcgtgatatgatacctatggatgaacttggcccagat
ggctactccactatcgatcaccgggagaaggagcgcaaatacaagaccagtgataacaca
ggagatgcctcagagaaagaacctttaaaaaatgacacaaataggaaaaacattaacagg
agtaacagggcttcggtgaatctggtggatgcccgtgacattaaacctcagcctgttgac
tcctgggtctaa
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