Chaetura pelagica (chimney swift): 104389340 Help Entry 104389340         CDS       T08631                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea03040   Spliceosome Brite KEGG Orthology (KO) [BR:cpea00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104389340 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cpea03021]     104389340 (SF3B3)    03041 Spliceosome [BR:cpea03041]     104389340 (SF3B3)    03036 Chromosome and associated proteins [BR:cpea03036]     104389340 (SF3B3) Transcription machinery [BR:cpea03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      104389340 (SF3B3) Spliceosome [BR:cpea03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     104389340 (SF3B3)  Complex B     104389340 (SF3B3)  Complex C    U2 SnRNP specific factors     104389340 (SF3B3) Chromosome and associated proteins [BR:cpea03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      104389340 (SF3B3)     TFTC complex      104389340 (SF3B3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  104389340 NCBI-ProteinID:  XP_009996612 LinkDB All DBs Position Unknown AA seq 1192 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGF ASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHN AYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASV IRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDEWYVLVGVAKDLILNPRSVAGGFV YTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKH IANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVA GADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQ KTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRS YYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRTPPEVSKKLEDIRTRYAF NT seq 3579 nt NT seq  +upstreamnt  +downstreamnt atgtttctctacaacctgactttgcaacgcgccaccggcatcagcttcgccatccatggc aacttctcaggaaccaagcaacaagaaattgtcgtttcccgcggcaagatcctggagttg ctccgccctgatcccaacaccgggaaagttcacaccctgctgaccgtggaggtgtttgga gtcatccgttccctcatggccttcaggctgacagggggcaccaaggattacatcgtggtg ggcagtgactcgggtcgaattgttatcctggaataccagccctccaagaatgtctttgaa aagatccatcaggaaacctttggcaagagtgggtgtcgcaggattgtcccaggccagtac ctggcagtggatccaaaaggtcgtgctgtcatgatcagtgccatcgagaagcagaagctg gtctacatcctcaacagggacgctgctgcccgcctcaccatctcctcccccctggaagcc cacaaggccaacaccttggtctaccacgtggtgggagtcgatgtgggctttgaaaacccc atgtttgcttgtctggagatggattatgaggaagcagacaatgatcccacaggagaagca gcagccaacacacagcagaccttgaccttttatgaactggacctgggtttgaaccacgtt gttaggaaatacagtgagcccttggaagagcatggcaacttccttataacagttcctggt ggttctgatggacctagtggggtgctgatctgttctgagaactatattacttataaaaac tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac ccagagagaggtatgatttttgtctgctctgctacacacaagaccaagtccatgtttttc ttcctggcccagacagagcagggagacattttcaaaatcactctggagactgatgaagac atggtgacagagattagactgaagtactttgacacagttcctgttgctgctgccatgtgt gtgctgaagactgggtttctctttgtggcatctgaatttggaaaccattacctgtaccag atagctcacctgggagatgatgatgaggagccagagttctcttctgccatgcctcttgag gaaggagacaccttctttttccagccacgacctctcaagaacctggtgctggtggatgag ttggacagtttatctcctattctgtgctgtcagatagcagatttggccaatgaggacaca ccccagttgtacgtggcttgtggtcggggtccccgctcatctctgagggttctaaggcat ggacttgaggtctctgaaatggctgtctcagagctgcctggtaaccccaatgctgtgtgg actgtgaggagacacgttgaagatgaatttgatgcctatatcattgtgtccttcgtgaac gccacactggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg ggtactacacccaccttgtcctgctctctccttggtgatgatgctttggtacaggtttac ccagatgggatcaggcacatccgagcagataagagagttaatgaatggaagacaccaggg aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga ggagagctggtgtactttgagatggacccgtcagggcagctgaatgagtacacggagagg aaggagatgtcggccgacgtggtgtgtatgagcttggccaacgtgccgcccggcgagcag cgctcccgcttcctggccgtggggctggtggacaacactgtcaggatcatctcccttgac ccctcggattgcctgcagcccctgagcatgcaggcccttcctgcccagccagagtctctc tgtattgtggagatgggtggaacagagaagcaggatgaactgggagagaggggctccatt ggctttctgtacctgaacattgggctgcagaacggtgtgctgctcagaactgtcctggat cctgttactggagatcttgtcctggccatgtcaagtcgttcctggctcagttattcctac cagtcacgtttccacctgactcccctctcttatgagaccttggagtttgcatctggattt gcttctgagcagtgcccagagggcattgtagccatctccaccaacactctaaggattttg gcactggagaaactgggggcagtcttcaaccaggttgccttccccttgcagtacacaccc cggaaatttgtcattcaccccgagagcaacaacctgatcatcatcgagacggatcacaac gcttacaccgaggccaccaaggcccagaggaagcagcagatggctgaggaaatggtggag gctgcaggtgaagatgaacgggaactggctgcagagatggctgcagcctttctgaatgag aaccttcctgaatccatctttggtgctcctaaggcagggaatggacagtgggcctctgtt atcagggtgatgaaccctatccagggaaatacattagatctggtgcagctggagcagaat gaagctgccttcagtgtggccgtgtgcaggttctccaatactggtgatgagtggtatgtg ctggtgggagtggccaaggacctgatcctgaacccacgctccgtggctggggggtttgtc tacacctacaagctggtgaacagtggtgagaagctggagttcctgcacaagacccctgtg gaggaggttcctgcagccattgctccattccaaggtagagtcttgattggagttgggaag ctcctacgtgtctatgacctgggcaagaagaaactgcttcggaagtgtgagaacaagcac attgccaactacatctgtgggatccaaaccattgggcacagggtgattgtttcagatgtt caggagagtttcatctgggtacgttacaagaggaacgagaaccagctcatcatctttgct gatgacacctacccccgctgggtcaccacagcaactctcctggattatgacactgtggct ggagcagacaagtttggcaacatctgtgtggtgaggttgcctcccaacaccaacgatgag gtagatgaggatcccacaggcaacaaagctctctgggacaggggcctgctgaatggagca tcacagaaggctgaagtgatcatgaattaccacgtgggagagacagtgctttccttacag aagaccaccctgatcccaggaggttctgaatctcttgtctacaccaccttatcagggggg atagggatcttggtcccttttacttcccacgaggatcatgacttcttccagcacgtggag atgcacctgagatctgagcaccctcctctctgtggacgagaccatctcagtttccgctcc tactacttcccggtgaagaatgtgatcgatggggacctgtgtgagcagttcaactccatg gagcccaacaaacagaaaaatgtggctgaagagctggataggaccccacctgaggtgtcc aagaagctggaggacatccgcacccgctacgctttctga

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