Chaetura pelagica (chimney swift): 104389363
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Entry
104389363 CDS
T08631
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104389363 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104389363 (PDS5B)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104389363 (PDS5B)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
104389363 (PDS5B)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
104389363 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
104389363
NCBI-ProteinID:
XP_009996647
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MAHSKTRANDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQSEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYL
YATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGGKIEEDFPHIRSALLPVLHHKAKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGNAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDIKEC
LWFILEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDQKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFAPGKPKAANVLGAVNKPLAS
AGKQSQSKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEEFTLASPLPGKKTDK
RDDSDLVRSEMEKPRGRKKAAITDSEEKLSIDDLSKLGQEQKLRGSQRGRKRPAVVSESD
ETQWQEEKRLKEDVIESEDEQNSPPKKGRRGRPPKANNGGTPKEEPVAKSSKRSKKKQTP
AAAAEEEEEEEERQTENIEQKPKGRQNRTQKRTPQRAEPSETSTVESAQSTPQKRRGRSS
NTPPSQQKKVRVGRSKQAASKENESSEEMDVFQSSSPVSDDIPQEEVTEEEEVSTINIRR
RTSKRERR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaagagccaatgatggaaaaatcacataccctccaggagtcaaa
gaaatctctgataaaatatctaaagaagagatggtgaggaggttaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctctacctaaatcttgct
ttacatcttgcttcagattttttcctcaaacatcctgataaggatgtacgtttgttggta
gcatgttgtcttgctgatattttcagaatttatgcccctgaagctccatacacttcacca
gataaactaaaggatatatttatgttcataacaaggcaacttaagggtttggaagacaca
aaaagcccccagtttaatcgatatttttacttgcttgagaacattgcttgggtcaaatct
tataacatatgctttgaattagaagacagcaatgagatttttacacagttatacagaaca
ctgttttcagtaataaacaatggtcataaccaaaaagtacatatgcacatggttgatcta
atgagctctatcatttgtgagggagatactgtgtcacaggaacttttggatacagtgtta
gttaatctagtgccagcacataagaatttaaataagcaagcctatgacttggcaaaggct
ttactaaagcggacagcacaagcaattgaaccatacattactaatttcttcaatcaggtc
ctcatgcttggtaaaacatcaattagtgacctgtcggagcacgtgtttgacttgattttg
gagttatacaatattgacagtcacctcttgctttctgttctaccacagcttgaattcaaa
cttaagagcaatgacaatgaagaacgtctgcaggtggtaaaacttctggcaaaaatgttt
ggggcaaaggattcggaattggcatctcaaaacaaaccactttggcagtgctacctggga
aggtttaatgatatccatgtacctattcgtcttgaatgtgtgaaatttgcaagtcactgc
cttatgaaccatcctgacctagctaaagacttaacagagtatcttaaagtaaggtcacat
gatcctgaagaggccataaggcatgatgttatagtatccatagtaactgctgctaaaaaa
gatcttttgcttgtcaatgatcacctgcttaattttgtcagagagcgaacactggataag
aggtggagagtgaggaaggaagctatgatgggacttgcacagatatacaagaaatattca
ttgcaatcagaagcaggaaaagaagctgcaaaacagatatcatggatcaaagataaactt
ctgcatatatattatcaaaacagtattgatgaccgactacttgttgaacgtatctttgcc
cagtatatggtccctcacaacttggagacaaatgaacgaatgaaatgtttgtattacctt
tatgcaacgctggattcaaatgctgtgaaagcattgaatgaaatgtggaagtgtcaaaat
ctgctacggcatcaagtaaaggatttagttgacctaataaaacaacccaaaacagatgcc
agcagtaaagctatattttcaaaagtgatggttataacaagaaatcttcctgatccaggg
aaagctcaagatttcatgaaaaaattcacacaagttctagaagatgatgaaaaaataaga
agtcagttagaaatgcttgttagcccaacatgttcttgtaaacaggctgaaggatgtgtg
agggaaatcacaaagaagttgggcaatccaaaacaaccaacaaatcctttcctggaaatg
attaagtttcttcttgagagaattgctcctgtgcacattgatactgaatccatcagtgcc
cttatcaagcaagtaaacaaatctatagatggaacagctgatgatgaagatgagggtgta
cctactgaccaggcaatcagagcaggtcttgaattgcttaaggtactttcatttacgcac
cctatctcatttcattcagctgaaacttttgagtctctcctggcttgcttgaaaatggat
gatgaaaaagtggcagaagctgcattacagattttcaaaaatacaggcggtaaaattgaa
gaagactttcctcatatacgatcagctttgcttccagtgctacatcataaagctaaaaag
ggaccccctcgtcaagccaagtatgcaattcactgcattcatgcaatattttccagcaaa
gaaactcagtttgcacagatatttgagccactgcataaaagtctggatccaagcaatttt
gagcatctgattacaccattggttactataggccatatagccatgctagcacctgatcaa
tttgctgcccctttgaagtctttggttgccacttttattgttaaagatttgctaatgaat
gataggcttccaggaaaaaagacaacaaaactttgggtcccagatgaagaagtatctccc
gaaacacttgttaaaattcaagccatcaaaatgatggttcgatggttgttaggaatgaag
aacaatcacagcaagtcaggaacttctactctgaggttgctaacaacaatattacacagt
gatggagatttaacagagcagggaaaaattagtaaacctgatatgtctcggttgaggctg
gctgcagggaatgctattgtgaagttggcacaagaaccttgctaccacgaaatcatcacc
ttagaacagtaccagctgtgtgcactagccataaatgatgaatgttaccaagtgaggcaa
atatttgcgcagaaacttcacaaaggcctttctaggctacgactgccactggagtatatg
gctatttgtgcactgtgtgcaaaagatccagtgaaagagaggagagctcatgctaggcag
tgccttgtgaagaacataaatgtcagaagggaatatctgaagcaacatgcagcagttagt
gagaaactgttgtcacttctgccagaatatgttgttccttatactatccatcttctagct
catgacccagattatgtcaaagtccaggacattgaacaactgaaggacattaaagagtgc
ctgtggttcatactggaaatattgatggctaaaaatgaaaacaacagtcacgcatttatc
agaaagatggtagaaaatatcaaacagactaaggatgctcaaggcccagatgaccaaaaa
atgaacgagaaactatacacagtctgtgatgtagcaatgaatattattatgtcaaagagt
acaacatacagtttggaatcccctaaggaccctgtacttccagccagatattttactcaa
cctgacaagaatttcagtaacaccaaaaattatcttcctccggaaatgaagtcttttttc
gctcctggaaagcccaaagcagccaacgttcttggagcagttaataagcctcttgcatca
gcaggcaagcagtctcagtccaaatcttcacgaatggaaactgtaagcaatgccagcagc
agttcaaatccaagctctccaggaaggatcaaaggaaggcttgacagtagtgaaatggac
cacagtgaaaatgaagaattcacactggcttcacccttaccagggaagaaaactgacaaa
agggacgactctgatcttgtaaggtcggaaatggaaaagcccagaggaaggaagaaagca
gctatcacagattcagaagagaaacttagcatagatgacctgagtaaactgggacaagag
cagaaactcagaggtagtcaacggggaaggaagagacctgcagttgtttcagaatctgat
gaaacacaatggcaagaagaaaaaaggctaaaagaagatgtaatagaaagtgaagatgaa
cagaacagtccaccaaagaaagggagaagaggacgcccacccaaagcaaataatggggga
acaccaaaggaagaaccagtagcaaagtcatcaaaacggagcaaaaaaaaacaaacacca
gcagctgcagcagaagaggaagaggaggaggaagaaaggcaaactgaaaacattgaacaa
aaaccaaaaggcaggcaaaataggacacagaaaagaacaccgcaaagagcagaaccatct
gaaactagtacagttgaatcagcacagtctacgccacagaaaagacgaggaaggtcatca
aacacaccaccatcacagcaaaaaaaagtccgtgtgggacgttccaaacaagcagccagt
aaagagaacgaatctagtgaagagatggatgtttttcagagtagttcacctgtcagtgat
gacattccccaggaagaagtaacggaagaagaggaggtttccacaatcaatatccgtcgc
agaacttccaaaagggaaagacgatga
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