Chaetura pelagica (chimney swift): 104389486
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Entry
104389486 CDS
T08631
Symbol
NUP160
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104389486 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104389486 (NUP160)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104389486 (NUP160)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104389486 (NUP160)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104389486 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
TPR_Nup160_C
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
104389486
NCBI-ProteinID:
XP_009996786
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
TTSGDTVELVEESLDVNLLHNAVRLRLQGCPLLPGGVHLCELQSHLVLLLVTGQTLHRLF
LPHPARLYRSELLTESQMQSVFTDIGKIDFQDPSNYCNIPSVPGLAPTSTASAAWLSSEG
EALFALPSALGGIFVVKLPPPDTPGSISIVELKQSSVMQRLLTGWMPTAIRGDCGPSDLP
VSLSVHCLDHDAFLFALCQDHKLRMWSYKFCVFQLVSTESNRYSLDHISSLFSSQETLVD
FALTSAEIWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVTVRPDQDPRETYL
EYLFTPGRFSNAAIQKALQIFSQGTDRHMDLTWEELKREVTLAVESEFQGSVTEYECSPE
EFWQLQVEFWSKFYACCLQYQEALSRPLALHLNPYSSMVCLLKKGSLSFLVPCSLVDHLY
LLSNEHLLTEDDAAIFDDLEMSRDVVCLVQCLRLIGESISMEMAFIMEMACSRLQPPEKA
AEQIMEDLIANDTENVLEEIHSKLQEIRNPIHAMGVLIREMDYETDTDLERGGFPLPAPH
LGVRMSLAQLYGSGTAVAVVCGGVSKVASLRFLICRDLLILQQLLLRLRDPVVLGGGQLF
QSQQQDLLHRTSPLLLSYYLIRWASQCLAADVPIDTLESNLQHLSVLELADTTALTPHKL
VSSPQTIVELFFQEVARKHIISRLFLQPNTSLAETSLNWPHLFTAVVTDFLPLLWPSNPS
FLFPECLMGSCQYTQLQEYIRLLQPWCHVNMGSCRFMLGRCYLVMGEAHKALDCFCQAAS
EVGREEFLDRLIQPEEGEIISTPRLQYYNKVLRLLEMVGLPELVIQLATLAIMESADDWR
SQAMLRTCIFKHHLDLGHNSEAYVALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEFPY
INLDNEVVGIIESHARAVDLMTHNYYELLYAFHIYRNNYRKAGTVMFEYGMRLGREVRTL
RGLQKQGNCFLAAINCLRLIRPQYAWIVQPVSGAVYERPGASPKRSHDGECTAVPTTRQI
EILELEDLERESVLARIRLTLVQHDLSTAAVAGNSTPEETLALLIRAGLFDTAVTLCQTF
KLSLTPIFEGLTFKCIKLQLGGEAVQAEAWDWLAANQLSTLVTTKESSATDEAWRLLSAY
LEHHPSQNSLYHRCVINKLLAHGIPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVELVL
EYVDAVLGKGHQYFGIEFPLSATAPMVWLPYTAIDQLLRALQESSTNHHNVVLYQKLQEK
MEDYQQKVSVATRDRLYRRS
NT seq
3844 nt
NT seq
+upstream
nt +downstream
nt
gaccacctcaggagacacagtggagctggtggaggagtctctggatgtcaacctgctgca
caacgccgtgcggctccggctgcagggctgcccgttgctgccggggggggtccatctctg
cgagctgcagagccacctggtgctgctgctggtcaccgggcagaccctgcaccgcctctt
cctgccccatcccgcccgcctctaccgcagcgagctgctcaccgagagccagatgcagtc
agtgttcacggatattggcaagattgacttccaggatccatccaactactgcaacattcc
cagcgtgcccggcctggctcccacctccacggcctcggctgcctggctgagcagtgaggg
ggaggctctgtttgccctgccctctgccctggggggcatctttgttgtcaagctccctcc
tcctgacacacctggatcaatttccattgtggaattgaagcagagctccgtgatgcagcg
tttgctcaccggctggatgcccactgccatcagaggggactgtggcccgtcggacctgcc
tgtcagcctctctgtccactgcctggatcatgatgcctttctctttgctctctgccagga
ccacaagcttcggatgtggtcctacaagttttgtgtcttccagctggtgagcactgagag
caaccgctacagcctggaccacatctcctccctcttctcctcacaggagactctggttga
ctttgccttaacctcagctgagatctgggctctgtggcacaacgaagagaaccaaaccgt
ggtgaaatacatcaactttgagcagaatgtggcgggccagtggaaccaggtctttgtgca
gccactgcctgaggaggaggtgacagttcgacctgaccaggaccccagggaaacctacct
ggagtatctcttcacacccggccgcttctccaacgcagccatccagaaagctctacagat
cttttcccaaggaactgacagacacatggatctgacatgggaggagttaaaaagagaggt
gaccttggccgtggaaagtgagttccagggcagcgtgacagagtatgagtgctcacctga
ggagttctggcagcttcaggtggagttctggtccaagttctatgcctgctgccttcagta
ccaggaagccctctcacggcccctggccttgcacttgaacccctacagcagcatggtgtg
cctgctgaagaagggctccctgtctttcctggtgccctgttccttggtggaccatctcta
cctgctctccaacgagcacctcctgactgaggacgatgctgccatctttgacgatttgga
gatgtctcgtgatgttgtctgtcttgtccagtgccttcgactgatcggagaatcaatttc
catggaaatggcattcatcatggaaatggcttgttcccgcctccagcctccagaaaaggc
tgcagagcagatcatggaggacttgatagctaatgacacggagaatgtgctggaggaaat
acacagcaaactgcaggagatccggaaccccatccatgccatgggagtgctcatccggga
gatggactacgagacagacaccgacctggagagaggtggttttcctcttccagctcctca
cctgggcgtgcgcatgagcctggcccagctgtacggcagcgggacggcggtggccgtggt
gtgcgggggggtctccaaggtggcctcccttcgtttcctcatctgtcgggacctcttgat
cctccagcagcttctgctgcggctcagggaccctgtggtgttgggagggggacagctctt
ccagtcccagcagcaggacctgctgcacagaacctctcccctgctgctctcctactacct
gatccgctgggccagccagtgcctggcggccgacgtccccatcgacaccctggaatccaa
cctgcagcatctctctgtgttggagttagcagacaccactgctctgacaccccacaagct
ggtatccagccctcaaacaattgtggagctcttctttcaagaagtggccagaaaacacat
catttctcgactcttcttgcaaccaaacacttctttggctgagacaagtttgaactggcc
ccatctcttcactgctgtggtgactgactttctgcccctcctatggcccagcaatcccag
cttcctcttcccagagtgcctgatggggagctgtcagtacacccagctccaggaatacat
ccgcctgctgcagccctggtgccacgtgaacatgggctcctgccgcttcatgctgggccg
ctgctacctggtgatgggggaggcacacaaggctttggattgtttctgccaagcagcctc
agaggtgggaagagaagagtttttggacaggctgatccaacctgaggagggggaaatcat
ctccactccacgcctgcagtactacaacaaggttctgcgcttgttggaaatggtgggttt
gccagagctggtcatccagctggccaccttggccatcatggaatctgcagatgactggag
gagccaggctatgttgaggacttgcatcttcaaacatcacttggatttgggacacaacag
tgaagcatacgtggccttaacacaaaacccagatcccagcaggcagctggactgtctacg
ccagctagtggtggttctgtgtgagcgctcccagctccaggacctggtggagtttcctta
catcaacctggataacgaggtggtggggatcatcgagtcacacgctcgagccgtggacct
gatgacccacaactactacgagctgctctacgctttccacatctaccgcaacaactaccg
caaggctgggacggtgatgtttgagtacgggatgcggctgggccgggaggtgcggacgct
gcgggggctccagaaacaggggaattgtttccttgctgccatcaactgcctgcgcctgat
ccgcccccagtacgcctggatagtgcagccagtatcaggagctgtgtatgaacgcccagg
agcatccccgaagagaagccacgatggggagtgcacagctgtccccacaactcgccagat
cgagatcctggagctggaggatttggagagggaaagtgtcctggcccggatccggctgac
tctggtgcagcatgacctgtcaacagcagctgtggcaggcaactctactcctgaggaaac
tcttgctctgctgatccgggccggcctcttcgacaccgctgtcactctgtgccaaacgtt
caagctgtccttgacacccatctttgagggactcactttcaagtgcatcaagctgcagct
gggaggggaggcagtgcaggcagaggcctgggactggctggctgcaaaccagctctccac
cctggttaccaccaaggagtccagcgccacggatgaagcctggcggctgctctctgccta
tttggagcatcacccatcccagaacagcctgtaccatcgctgtgtcatcaacaagctcct
ggcccatgggatccctctgcccaactggctcatcaacagctacaagaaggtggatgctgc
tgagctcctgcggctctacctgaattatgacctgctggaggaggccgtggagctggtcct
ggagtacgtggatgctgtgctgggcaaagggcaccagtattttggaattgagttcccact
gtcagccacagcccccatggtgtggttgccctacactgccatcgaccagctgctccgggc
cctgcaggagagctccaccaaccatcacaacgtcgtgctctaccagaagctgcaggagaa
gatggaggactaccagcagaaggtcagcgtggccacccgggaccgcctgtaccgccggag
ctag
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