Chaetura pelagica (chimney swift): 104389495
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Entry
104389495 CDS
T08631
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
104389495 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
Other domain-containing proteins
Patched domain-containing proteins
104389495 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
104389495
NCBI-ProteinID:
XP_009996797
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MENFASHHGQLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSN
RTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAE
KWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITGLVLVVTLAILCC
SMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEM
LSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSC
IAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTAKFSE
DTADSEETSTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSD
LSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISW
FESYLNYLRKLNISTGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSKKYNNEVDVVASRM
FLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYTSSVGAPLQNSCISA
LFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDN
CAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCL
FLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITT
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttgcttctcaccatggccagttgcactctgctgtgaccaggatccaagtt
caaagacctggtttcaattacacgtttgcccatatatgtatcctgaacaatgacaagaca
tgcatagtggacgacatagtgcatgtactggaggaattaaaggctgctcgttcttctaat
cgaactaattttgcaatcacttacccgattactcacttaaaggatggcagggaagtgtat
aatgggcatcagcttggtggggttactgtgcacagcaaagaccgggtgaagtctgcagaa
gccattcagctcacctactacttgcaggcaatcaactccttgaatgacatggtggcagag
aagtgggaatccatcttttgtgacactgttgaacttttccagaaatccaacaggaaagtg
aaaatgtatcctttcacttcttcttcactgaaggaggatttccagaagacgagcagggtg
tcagaacgctacctgatcacaggcttggtccttgtggtcaccttggccattctctgctgc
tccatgcaggattgtgtccgcagcaaaccctggcttggcctgctaggattgctgaccgtg
acccttgccaccctgactgcagctgggatcatcaatctcactggtgggaaatacaattcc
accttcctgggaatccccttcgtcatgttaggtcatgggttatatgggacttttgaaatg
ttgtcctcctggagaaaaactagagaagaccaacatgttaaagagaggactgcagctgta
tttgcagactccatgctctcgttttctctcaccactgccatgtacctggtcacttttgga
ataggtgccagtcccttcactaacattgaagcagccaggattttctgctgcaattcttgt
attgcaattttcttcaactacctctatgtactctccttttatggttccagcctggtgttt
actggctacatagaaaacaactaccagcatagtatcttctgcagaaaggtaccaaaacca
gaggtgttgcaagagaagcctgcatggtataggtttcttctgacagccaaattcagcgag
gacactgcagattcagaggaaacgagcacttacgagagtcatcttttggtgtggttccta
aaacgctattattgtgactggataacaaacacttatgtcaagccttttgtagttctcttt
taccttgtttatatttcctttgccttaatgggctacctgcaggtcagtgaagggtcagac
ctgagcaacatcgtagcgaccgcaacacggaccattgagtatacaacagcccagcagaag
tatttcagtaactacagcccggtgatcgggttctacatctacgagtcgatcgagtactgg
aacaccagtgtccaggaggacgtgctggagtataccaagggctttgtgaggatatcttgg
tttgaaagctacttaaattaccttaggaaactcaacatatctacgggcttgcccaagaag
aacttcactgatatgttgaggaactccttcctgaaggcccctcagtttgctcatttttca
gaggatatcatcttttcgaagaaatacaacaacgaagttgacgttgtggcctccaggatg
ttcttggtggccaagacaatggaaaccaaaagagaagaactttatgacctcctggagacc
ctgaggaagctctctctcacctccaaggtgaaattcatcgttttcaatccatcgtttgtg
tacatggatcgttacacctcttcggtgggagcccccttacaaaactcctgcattagtgct
ttatttctgcttttcttctctgcattcctggtggcagactctctgatcaatgtctggctc
actctaactgttgcctcagttgagtttggagttataggttttatgaccttgtggaaagtg
gaactagattgtatttctgtgttgtgcttaatttacggaattaactatacaattgacaac
tgtgctccactgttatcaacctttgtcctgggcaaagagttcacaagaactaaatgggtg
aaaaatgccctggaagtgcatggggtagctattttgcagagctacctctgctatattgtt
ggtctgattcctcttgcagctgtgccttcaaatctgacccgtacactgttcaggtgcttg
tttttaatagcattagtcaccttctttcactgctttgccattttacctgtgatactgact
ttcctgccaccgtccaagaagaagaggaaagagaagaagaatcctgaaaaccgtgaggaa
atagagtgcgttgaaatggtggatatggatagtacccgagtggttgaccaaattacaaca
gtctaa
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