Chaetura pelagica (chimney swift): 104389646
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Entry
104389646 CDS
T08631
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpea01009
]
104389646 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104389646 (STAU1)
Protein phosphatases and associated proteins [BR:
cpea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104389646 (STAU1)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104389646 (STAU1)
mRNA cycle factors
Stress granule specific factors
104389646 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
104389646
NCBI-ProteinID:
XP_009996970
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSQVQIQNPAAIAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTSTN
AAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEA
EGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMYK
PIDPYTGMRSTYNYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKHD
AAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQVT
KESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRI
KKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVKV
GAHTAEGMGTNKKVAKRNAAENMLEILGFKVPQPQPPKPALKTEEKTPVKKTGDGRKVTF
FEPGSEDTSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFSRAAPNP
AKATVTAMIARELLYGGTSPTAETILKNNNSSGHVPHGPLTRPSEQLDYLSNVQGIQVEY
KDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMPRT
GNGPMSVKVKMPRADTFCRRMRGCVKQEMESDPLLKPANSNTLGQTLDSTA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcaaattcagaatcctgctgccattgcagggagccaaatattgaataaa
aacccatctctttcacagcctttgagtattccttctactactagttctttgccctctgaa
aatgcaggtagacctatccaaaattctgctttaccctctgcatcagttacatccaccaat
gcagctgcagctccttccaacatggcaaaccccaaagagaaaacccccatgtgtcttgtg
aatgagttagcccgtttcaacaagattcagcctgagtataagcttttgagtgagcaaggt
ccagctcattctaaggtgtttacagtgcaactcactcttggggaccagcactgggaagct
gaaggaactagtattaaaaaagcgcaacatgcggcagctgccaaagctttggaagggaca
aaattcccgaagcctacggctcgtccatctcgtagtgaaggcaagaatccagacagtgta
acccccacagtggagttaaatgcactttgcatgaagctgggaaagaaacctatgtacaaa
cctattgatccttatacagggatgagatccacttacaactatacaatgagaggtggcact
tatcctccacggtacttttacccatttcctgttgggcccttactgtatcaagttgagctt
tctattggagggcagcagtttcatgggaaaggaagaacaagacaagctgctaagcatgat
gctgctgctaaagcactgaaagttctgcagaatgagcccttgcctgagaaaccagaggtt
aacggaaaagaaccagatgatgaaaatctcaataaatctgaaataagccaagtttttgag
attgcacttaaaaggaacttgcctgtgaattttgagtttttccctctgaaacaggtgacc
aaggaaagtggtcctccccatatgaagagctttgtaaccaaggtgtcagttggagaattc
atgggtgaaggtgaaggaaaaagcaagaagatctcaaagaaaaatgctgcaatagcagtc
ctagaagaactgaaaaaattgccaccccttcctacagttgagaaaatgaagccacgaatc
aaaaagaaaacaaaatcaatagtgaagctgcaaacaagtccagaatatggccaaggaatg
aatcccattagcagacttgcccaaatacagcaggccaagaaagagaaggaaccagagtac
atgctcatcacagaacgtggtctcccacgacgcagggagtttgttatgcaggtcaaagtt
ggtgcacacacagctgaaggaatgggcacaaataaaaaagttgctaaacgcaatgcagct
gagaatatgttggaaattttaggtttcaaagtcccccaacctcaacctccaaagccagca
ttaaagacagaagagaagacaccagtgaagaaaacaggggatggaagaaaagtaaccttc
tttgagccaggctctgaagacacttcaactagtaataaagaagatgaatttaggatgcct
tatctcagccatcagcagcttcctgctggaatccttcccatggtccctgaggttgcacaa
gctgtaggagccaatcaaggacaccacaccaaagagttcagtagggcagccccaaatcct
gccaaggcaacagtaacagcaatgattgctagagagctattgtatggtggtacttctcct
actgctgagaccatattaaagaataacaactcatcaggccacgtaccccacggaccactt
actaggccctcagagcagctggactatctttccaatgttcaaggaatccaggttgaatac
aaagattttccaaaaaataacaagaatgagtttgtatctcttataaactgttcctctcag
ccaccactgatcagccatggaattggaaaggatgtagaatcttgccatgacatggctgcg
ttgaatattttaaagttgctgtctgagttggaccaacaaaccacagagatgccaaggaca
ggaaatggaccaatgtctgtaaaagttaaaatgccaagggctgataccttctgcagaagg
atgagaggatgtgtgaaacaagaaatggaaagtgaccctcttctcaaaccggctaactca
aacactttgggacaaacactggacagcactgcctaa
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