Chaetura pelagica (chimney swift): 104389803
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Entry
104389803 CDS
T08631
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104389803 (SNAPC4)
03021 Transcription machinery [BR:
cpea03021
]
104389803 (SNAPC4)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
104389803 (SNAPC4)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
104389803 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
HTH_Hrp3
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
104389803
NCBI-ProteinID:
XP_009997148
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MEGEADSSDDDMESNLPLDPETCLQMNYVYQEVIQEKLEEVELLLAQNKEQQKEIMGDLS
GPKAGKAGGGRNLPANRFLGHFMKPYFKDKTTGIGPPSNEDAKEKAAQGIKSFEQLISTK
WKSREKTLLQKAVVSDRLQRLLQPKLLKMSYWNQKLEKVKTEMEKQILEKQIKELEQEIE
AINQLPESDLLGNRFDEHDWEKISNIHFDGQRSSEELKKFWENWEHPSINKKEWTEEEIE
RLKKIAADHGYLDWQAIAQELGTNRTPFQCLQKYQIYNKDLKRKEWTKDEDQMLLELVQE
MRVGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLRKGPWTPEEDAMLLAAVGKYGERD
WYKIRTEVPGRSDAQCRDRYLKALHCDVKKGKWSLEEEEQLIDLVQKHGLGHWSKIASEL
PHRTDSQCLSKWQLMIGAKKKGSKRQHVQESSSSEESSSEDIELDLADSSEEETTTKEEV
EFPSIDLWIPTQSPQESNKGIYQTPSLFSPGSSDVRTTSSDMPRAGCDGNKDRAAVKTTE
LNTVLRGLARPHSTDITVRNPTEVLNKAARSGKQVLWVSLENVRRVLRNNTCLLMKLQPK
LLTRMSGVGTQQKLQHTPVRAGRQERERWKRMSLDRKLLMAVTPWVGNVLLPCVLQTGKM
AFHQTKADSIQEKLKSVSLVSTPLFKLFIQLFQIDTHGCLKIISERKLRQAEQLRSDLRR
PQQASQNMDTSSGNSSQSCTQRSSQRGVPRCAVRRRVALQPRESSVLESGAAAGQRAPPA
QGQRHKTRTVSELLREKRLRESQANKAMQRKVFVAPQMLVSGPLIIQHPPQQTVPSAQPG
SKTEAVGSKNSQVQCAPAPLPAFTSAAGSTSTSAVLENHSSSVPETGESPSSSQVTELQS
NKDKEKVLEDSPGGGALPGMNPAAAEKASDQGGCNGQVPAGSPASAVLQNQAFVPHQITV
VPVGIGSGTSKLSLSTPVPCELTSNGTQQRPVGLLSTHVTPQTGSHLIPSSILPFTWVVT
PQSLLSTAVQTVLGVPGAAAGSPSHTPVTSSISSLGVPPAPAGAHTPHPSSAETKAPSAQ
VAGGPLGKTAHHSTGLLPVILASPGCTTSSISAATPACPDGSSKASESSAAQTDAPSGTP
TLQAVVLPQAQLPTSTQGSDSQRLSGLTSSGKSYDSITTNGSPSSLRIVTKGIVLQPGDA
VSHNNVPRNSDCFAAQAWKNRPLASKPPTTQPADSPTQPTSSSAEKNVLDFSLISLEDEE
LVKEWMKGKQGVQVPSLQTRLPYLPPFLCNLKTLSKLLLQKAALEEQAACLLPSDASQGE
ATGVDLQAIRNLVQQKLGDNPAYLLLKARFLAAFTLPAVLATLPPPKVSTTLSASRKQYE
ESDEEEWQSEKEVSEEESCGNKLTGDESGDKDADLLNQIMGDEENVAQSVLDSWTDVADA
SAPQIRKSNRFRKRRRM
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagaagctgacagcagtgatgatgacatggagagcaatctgcctctggatcct
gaaacgtgtttgcagatgaactatgtgtaccaggaagttatccaggaaaagctggaggaa
gttgagctgctccttgcacaaaacaaagaacagcagaaggaaatcatgggcgacctcagt
ggtccaaaagcaggaaaagcaggaggtggtagaaatctaccagcaaatagatttttgggt
cacttcatgaagccatactttaaggataaaacaacaggaattggccctccttccaatgaa
gatgccaaggaaaaggcagctcagggcataaaatcctttgaacaactgatttcaacaaaa
tggaaaagcagagagaagacgttgctgcagaaggccgtggtgagcgaccgcctgcagcgc
ctcttgcagcccaagctgctcaagatgagttactggaatcagaaactggaaaaagtcaag
actgaaatggagaaacagatcctggaaaagcaaatcaaagaattggagcaagaaattgag
gcaattaaccaactcccagaaagtgacttgttgggaaacagatttgatgagcatgactgg
gagaaaatttccaacatccattttgatggacaacgcagttccgaagaactgaagaagttt
tgggaaaactgggagcatccaagcatcaacaaaaaggaatggactgaggaggagatagag
aggctcaagaagatagctgctgaccatggttatctggactggcaggctatagcccaggag
ctggggacaaacaggacacctttccagtgcttgcagaagtatcaaatctacaacaaggat
ctgaaaaggaaagaatggaccaaagatgaagaccagatgcttttagagcttgttcaagag
atgagagtaggaagtcacatcccatacaagaaaattgcttattacatggaaggaagagat
tctgctcagctgatttaccgatggacaaagagcgtggaccccagtttgaggaaaggaccc
tggacaccagaggaagatgctatgctgctggctgctgtggggaagtacggagagcgcgac
tggtacaaaatccggacagaggtgcccgggaggagtgatgctcagtgcagggacaggtac
ttaaaagcattgcactgtgatgtaaagaaaggcaagtggagtttagaggaagaggagcag
ctgattgatctggttcaaaagcatggcctgggtcactggagtaaaatagcttctgaactg
ccccatcggactgactcccagtgtctgagcaagtggcagctgatgattggggctaagaag
aagggatccaaacgccaacacgtgcaggagagttccagctctgaagagagcagcagtgaa
gacattgagctggacttagcagacagttcagaggaggagacaaccaccaaggaggaggtt
gaatttcccagcattgacttgtggatacccacacagagtccacaggagtcaaacaaagga
atataccagactccatccctcttctctcctgggagctctgatgtgaggaccacgagcagt
gacatgccaagggcagggtgtgatggaaacaaagacagagctgctgttaagaccacggag
ttgaacactgtcctgagaggcctggcacgtccccattcaacagacatcactgtgaggaac
ccaacagaagtcctgaacaaggctgccaggtctggaaagcaagtgctatgggttagcctg
gagaatgtgagaagagtcttgaggaataacacatgccttctgatgaaacttcaaccaaag
ttgttaacaaggatgtctggagtgggtacccaacagaagctgcagcacacccccgtgaga
gctggtcggcaggagagggagcggtggaagaggatgagcctggacaggaagctgctgatg
gcagtgacaccctgggtgggcaatgtactgctgccctgtgtcctgcaaactgggaagatg
gcttttcaccagacaaaagctgattctattcaagagaagctcaagtctgtcagtctcgtg
agcactcctctgttcaaacttttcattcagctcttccagattgatacccatggctgcctg
aagatcattagtgagagaaagctgaggcaggcagagcagctccgatctgacctcagaagg
cctcagcaggcttcccaaaatatggacacttcttcaggcaattcatcacaatcttgtact
cagaggagctcccagaggggtgtaccaaggtgtgctgtcaggagacgtgtggctctacaa
ccaagggagagttctgtcctggagagtggtgctgctgctgggcagagagctcctccagcc
caagggcaaaggcacaagactagaactgtctcagaattactgagagagaagcgactaaga
gaatcccaggctaacaaagctatgcagaggaaagtctttgttgccccacagatgctggtt
tcggggcctctgataatccagcacccaccacagcaaaccgttccttctgcacagccaggg
agcaaaactgaagcagttggtagtaaaaatagccaagtgcagtgtgcaccagctccactg
ccagcatttacttctgctgcaggttcaacttctaccagtgctgtgcttgaaaaccattct
tcatcagtgccagaaactggggagagccccagttcctcacaagtgacagaactacagtcc
aataaagacaaagagaaagttttggaagatagccctggaggaggggctcttccaggcatg
aatccagctgcagcagagaaggcctcagatcagggagggtgcaatggtcaggtcccagct
ggcagcccagcttcagcagtgttgcaaaaccaagcttttgtgccacatcagattacagtg
gtgcctgttggcattgggtctggcaccagcaaattgtctctttccacaccagttccctgt
gagctgaccagtaatgggacacaacagaggccagtcggtctcttgtctactcatgtaacc
ccacagactggttcccacttgattcccagcagcatcctgcccttcacctgggttgtgaca
ccacagtctctgctctccacggctgtgcagactgtgctgggtgttcctggtgctgctgcg
gggagtccgtctcacacgcctgtcacatccagcatctccagcctgggagtgcctccagca
ccagctggagcacatacacctcaccccagcagtgcagagacaaaagcaccaagtgcccag
gtagcaggaggacctttgggaaagacagctcaccattccacaggtctcttacctgtgatc
ttagcaagccctggatgcaccacctccagcatttctgctgcaacccctgcatgtccagat
ggctcctccaaggcttctgaatcctctgcagctcagactgatgctccatctggtacacca
accctgcaggctgtggtgctgccccaagcacagctacctacgagcacccaagggtctgat
tcccaacgtctgtcaggtctcactagctcaggaaagagctatgactccattacaaccaat
ggatcaccttccagtctaaggattgtcaccaaagggattgtgctccaaccaggagatgca
gtttcccataacaatgttccaaggaactctgattgctttgctgcacaagcatggaaaaac
agacctcttgcctccaaacctccaactacacagcctgctgacagtccaactcagccaacc
tcttccagtgcagagaagaatgtacttgactttagcctcatttccctcgaagatgaggag
ctagtgaaggagtggatgaaggggaaacaaggtgtccaagtaccatcactgcagaccagg
ttgccttatttgccaccttttctgtgcaacttaaaaaccctctcaaagctacttttgcag
aaagcagctttagaagagcaagcagcatgtctgctgccttccgatgccagtcagggtgaa
gccactggggttgatctccaagctatcaggaacctggtgcagcagaaactcggagataac
cctgcttacctcctcctgaaagccagattcctggcagccttcacactcccagctgtacta
gcaactctgcctcctccaaaagtgtcaacaactctgtcagccagcaggaagcaatatgaa
gagagtgatgaagaggagtggcagagtgagaaggaagtgtctgaggaagagagttgtggg
aataaattaacaggtgatgagtctggagacaaagatgctgatttactaaatcagatcatg
ggagatgaagagaatgttgcacagtctgtcttggactcctggactgatgtggctgatgcc
agtgctcctcaaatcaggaaaagtaaccgcttcaggaagaggaggaggatgtga
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integrated database retrieval system
