KEGG   Chaetura pelagica (chimney swift): 104389810
Entry
104389810         CDS       T08631                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03320  PPAR signaling pathway
cpea04148  Efferocytosis
cpea04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104389810 (RXRA)
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    104389810 (RXRA)
   03320 PPAR signaling pathway
    104389810 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpea03000]
    104389810 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cpea03310]
    104389810 (RXRA)
Transcription factors [BR:cpea03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    104389810 (RXRA)
Nuclear receptors [BR:cpea03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   104389810 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3 CRT10
Other DBs
NCBI-GeneID: 104389810
NCBI-ProteinID: XP_009997159
LinkDB
Position
Unknown
AA seq 440 aa
MATPSLHPSIGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
SLGFGTSSPQLNSPMNPVSSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRS
SGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKR
EAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPN
DPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKD
GILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKG
LSNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLI
GDTPIDTFLMEMLEAPHQMT
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggccaccccatccctccatccatccatcgggccaggcatcggctcctcgctgggctcc
ccgggccagctccactcgcccatcagcaccctgagctcgcccatcaatggcatgggacct
cccttctccgtcatcagctcccccatgggcccgcactcaatgtccgtcccctccaccccc
agcctgggatttggcaccagcagccctcagctcaactcgcccatgaaccccgtcagcagc
agctcagaagacattaagccacccctggggctcaatggagtcctcaaagtgccagcacat
ccctcaggaacgatggcctccttcaccaagcacatatgtgccatctgcggggacagatct
tcaggtaaacattacggggtttacagctgtgagggctgcaaaggcttcttcaagcgcacg
gtgcggaaggacctcacctacacctgccgcgacaacaaggactgcttgatcgacaagcgc
cagcgcaaccgctgccagtactgccgctaccagaagtgtcttgctatggggatgaagcga
gaagccgtccaggaggagaggcagcgggggaaggaccgcaacgagaacgaggtggagtca
acaagtagtgccaatgaggacatgcccgtggaaaagatcctggaagctgaactggcagtg
gagccaaagacagagacctacattgaagcaaatatgggcttgacgccgagctcgcccaac
gacccggtgacaaacatatgccaggcagcagacaaacagcttttcaccctggtggagtgg
gccaagaggatcccccacttctccgagctgcccttggacgaccaagtcatcttactcaga
gcaggctggaatgagctcctcattgcctccttctcccaccgctccatagctgtgaaggat
gggatcctcttagccaccgggctccacgtgcaccggaacagcgcgcacagcgccggcgtc
ggggccatcttcgacagagtactgacagaactcgtgtcaaaaatgcgagacatgcagatg
gacaagacagagctaggctgcctaagagccattgtcctcttcaaccccgactcaaaaggg
ctctccaacccagctgaagtggaggccttgcgggagaaggtgtacgcgtccctagaggct
tactgcaaacacaaataccccgaccagcccgggaggtttgcaaagctcttgctccgtctc
ccagccctccggtccatcggcctgaaatgcctggagcacctcttcttcttcaagctaata
ggcgacacgcccatcgacaccttcttgatggaaatgctggaagcgccgcatcaaatgact
tag

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