Chaetura pelagica (chimney swift): 104389919
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Entry
104389919 CDS
T08631
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpea01009
]
104389919 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpea03009
]
104389919 (DDX31)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104389919 (DDX31)
Protein phosphatases and associated proteins [BR:
cpea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104389919 (DDX31)
Ribosome biogenesis [BR:
cpea03009
]
Eukaryotic type
Pre-60S particles
Helicases
104389919 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Helicase_C_2
FF
TIMELESS_C
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
104389919
NCBI-ProteinID:
XP_009997279
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MNEFLLSFLLTLKQSNALKRKLQSPHGSPPLKQKHKPSLNTFKKCAAEADSREKGSSSQK
SLPKKQLTDKQNESQRSRPFIKTSSLFRNNPDIPKIHRKAVQQVQENVFTTDSFSQLDLH
PHLISTINTVLKISSMTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMES
KIQRSDGPYALVLVPTRELALQSFDTMQKLLKPFAWIVPGVLMGGEKRKSEKARLRKGIN
ILISTPGRLVDHIKSTECIHFRHTQWLIIDEADRLLDLGFEKDIAVILNALNADRETRQN
VLLSATLTEGVTRLADISLNDPISISIADDTQKALKPASQTEQQASSSSNCMEQENFAVP
EKLKQYFVMVPSKLRLVILAAFILEKCKFEKHHKMIIFFSSCEQVEFYYELLLKVLSGEL
ESEQPKRSSVSSASLQFLRLHGNMEQEERTEVFQEFLKSKTGILLCTDVAARGLDLPQVT
WIVQCNAPASPAEYIHRIGRTARIGCHGNSLLVLAPSEAGYVSLLASHKINVSELKLEKV
LSSLMKDDRFKVHRPGSKKSCGTDPQEVRERATVLQTRFENYVHSSEATVRWAKKALQSF
LCAYTTYPRNLKHIFHIKSLHLGHVAKSFGLRDAPQNLTALPAAGSKKKKIKPRPKRSDL
LKKTPSKRRLAEILRSEYSSGMDTGVSKVKKKKKRQRKPGNQQIPT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattcttgctctcttttctgttaacattaaagcagtcgaatgctctgaagaga
aagctccagtcaccacatggaagcccacctttgaaacagaaacataagccatcattaaac
accttcaagaaatgtgctgcagaagctgacagcagggagaagggaagttcatcacagaaa
tctctgccaaagaagcagttgactgacaagcaaaatgaaagccagagaagcagacctttc
attaagacatccagcctgtttagaaacaaccctgatatccccaaaatccacagaaaagca
gtgcagcaggtacaagaaaatgttttcaccacagattcttttagccagctggacctacat
ccacatctgatctccacaataaacactgttctaaagataagtagcatgaccagtgttcag
aaacaaacgatccctgtgctcctgcaaggcaaagatgctctagtgagatctcagactggt
tcaggtaaaactctcgcctatggaattccacttgtacagtctctgcaaggaatggaatcc
aaaatacagcgcagtgacgggccttacgcactcgtgttggtcccaacaagagagcttgcg
ctccagagttttgatacaatgcagaaactactgaagccatttgcctggattgtgcctgga
gtgctaatggggggagaaaagagaaaatcagaaaaagccaggttacggaaagggataaat
atcctcatctccactcctggccgcctggttgatcacatcaagtccacagaatgtatccat
ttccgtcacactcagtggctgattattgatgaagcagacaggctcctggacctgggcttt
gagaaggatatagctgtgatactcaatgctttaaatgctgacagggagacacgtcagaac
gtcctgctctcagccaccctcacagaaggggtaacacggctggctgatatcagtttgaat
gatcctatcagcatttccatagcagatgacacccagaaggcactcaaaccagcatcacaa
acagagcaacaagccagtagctcatcaaactgcatggagcaggaaaactttgctgttcca
gagaagctcaagcagtatttcgtgatggtccccagcaaactgaggcttgtcatattggca
gcttttatccttgagaaatgcaagtttgaaaaacaccacaagatgatcatctttttctcc
agctgtgaacaagtggaattctactatgagctccttctaaaggtcctttcaggagagcta
gagtcagaacaacctaagcgttcatctgtctcctctgccagcttacagtttctacgactg
catggcaacatggaacaggaagagagaacagaggtcttccaggagttcctaaaatccaag
actggcatcttgctttgcactgatgttgcagcacgtggactagacctgccgcaggttacg
tggatcgtacagtgtaacgctccggcctcacccgcggaatacatccaccgcatcggcagg
accgctcgcatcggctgtcacgggaacagcctgcttgtcctggcaccttccgaggcagga
tatgtcagcttgctggcttctcacaagattaatgtttcagagctaaagctggagaaggta
ttatccagcctgatgaaagatgatcgcttcaaggtgcacagaccaggcagcaagaaatcc
tgtggcacggaccctcaggaagtccgggaacgggccacggtcctgcagacaagatttgaa
aattatgttcactccagtgaagcaactgtccggtgggcaaagaaagcactccagtctttc
ctttgtgcctataccacctatcccagaaacctcaagcacatcttccacatcaagtctctc
cacctgggtcatgtggccaagagctttggcctgagagatgctccccagaacctgactgct
cttccagctgctggctcaaagaagaagaaaatcaaaccaagaccaaaaaggtctgacctt
ctcaagaagacccccagcaaacgtcgcctcgccgagatcctgcgatctgaatattccagt
gggatggacactggtgtatccaaggtcaagaagaagaagaaaaggcagagaaaacctggc
aaccagcagattccaacataa
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